RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 GNPDA2Q8TDQ7 276 aa12.22□□□□□ -0.45
CLSTN3-216ENST00000545663 GIPC3Q8TF64 312 aa12.22□□□□□ -0.45
CLSTN3-216ENST00000545663 DDB2Q92466 427 aa12.22□□□□□ -0.45
CLSTN3-216ENST00000545663 HEXA-AS1Q9H8Q6 139 aa12.22□□□□□ -0.45
CLSTN3-216ENST00000545663 RNPEPL1Q9HAU8 725 aa12.22□□□□□ -0.45
CLSTN3-216ENST00000545663 HAO2Q9NYQ3 351 aa12.22□□□□□ -0.45
CLSTN3-216ENST00000545663 ENOPH1Q9UHY7 261 aa12.22□□□□□ -0.45
CLSTN3-216ENST00000545663 ZNF256Q9Y2P7 627 aaPredicted RBP12.22□□□□□ -0.45
CLSTN3-216ENST00000545663 LHFPL6Q9Y693 200 aa12.22□□□□□ -0.45
CLSTN3-216ENST00000545663 TIPRLO75663 272 aa12.21□□□□□ -0.45
CLSTN3-216ENST00000545663 OMPP47874 163 aa12.21□□□□□ -0.45
CLSTN3-216ENST00000545663 LSM6P62312 80 aaKnown RBP12.21□□□□□ -0.45
CLSTN3-216ENST00000545663 RPL23AP62750 156 aaKnown RBP12.21□□□□□ -0.45
CLSTN3-216ENST00000545663 ZNF92Q03936 586 aa12.21□□□□□ -0.45
CLSTN3-216ENST00000545663 TSPAN31Q12999 210 aa12.21□□□□□ -0.45
CLSTN3-216ENST00000545663 ZNF788Q6ZQV5 615 aa12.21□□□□□ -0.45
CLSTN3-216ENST00000545663 ZNF329Q86UD4 541 aa12.21□□□□□ -0.45
CLSTN3-216ENST00000545663 OR51A7Q8NH64 312 aa12.21□□□□□ -0.45
CLSTN3-216ENST00000545663 OR2AE1Q8NHA4 323 aa12.21□□□□□ -0.45
CLSTN3-216ENST00000545663 OR5K1Q8NHB7 308 aa12.21□□□□□ -0.45
CLSTN3-216ENST00000545663 PYDC1Q8WXC3 89 aa12.21□□□□□ -0.45
CLSTN3-216ENST00000545663 C12orf43Q96C57 262 aaKnown RBP12.21□□□□□ -0.45
CLSTN3-216ENST00000545663 DGCR6LQ9BY27 220 aa12.21□□□□□ -0.45
CLSTN3-216ENST00000545663 PPP1R3EQ9H7J1 279 aa12.21□□□□□ -0.45
CLSTN3-216ENST00000545663 S100A14Q9HCY8 104 aa12.21□□□□□ -0.45
CLSTN3-216ENST00000545663 C19orf12Q9NSK7 152 aa12.21□□□□□ -0.45
CLSTN3-216ENST00000545663 NOP16Q9Y3C1 178 aaKnown RBP12.21□□□□□ -0.45
CLSTN3-216ENST00000545663 ADAM18Q9Y3Q7 739 aa12.21□□□□□ -0.45
CLSTN3-216ENST00000545663 TEX13CA0A0J9YWL9 993 aa12.2□□□□□ -0.46
CLSTN3-216ENST00000545663 GGT3PA6NGU5 568 aa12.2□□□□□ -0.46
CLSTN3-216ENST00000545663 NUDT19A8MXV4 375 aa12.2□□□□□ -0.46
CLSTN3-216ENST00000545663 LY86O95711 162 aa12.2□□□□□ -0.46
CLSTN3-216ENST00000545663 FHL1Q13642 323 aa12.2□□□□□ -0.46
CLSTN3-216ENST00000545663 SEC23BQ15437 767 aa12.2□□□□□ -0.46
CLSTN3-216ENST00000545663 ZBED5Q49AG3 693 aa12.2□□□□□ -0.46
CLSTN3-216ENST00000545663 ABCA11PQ4W5N1 156 aa12.2□□□□□ -0.46
CLSTN3-216ENST00000545663 CD300LDQ6UXZ3 194 aa12.2□□□□□ -0.46
CLSTN3-216ENST00000545663 ZNF782Q6ZMW2 699 aaPredicted RBP12.2□□□□□ -0.46
CLSTN3-216ENST00000545663 GLB1L2Q8IW92 636 aa12.2□□□□□ -0.46
CLSTN3-216ENST00000545663 OR10G2Q8NGC3 310 aa12.2□□□□□ -0.46
CLSTN3-216ENST00000545663 RAX2Q96IS3 184 aa12.2□□□□□ -0.46
CLSTN3-216ENST00000545663 HDHD2Q9H0R4 259 aa12.2□□□□□ -0.46
CLSTN3-216ENST00000545663 C14orf119Q9NWQ9 140 aa12.2□□□□□ -0.46
CLSTN3-216ENST00000545663 U3KQV3 271 aa12.2□□□□□ -0.46
CLSTN3-216ENST00000545663 TRAV27A0A087WT01 109 aa12.19□□□□□ -0.46
CLSTN3-216ENST00000545663 UNC119BA6NIH7 251 aa12.19□□□□□ -0.46
CLSTN3-216ENST00000545663 G3V2T6 193 aa12.19□□□□□ -0.46
CLSTN3-216ENST00000545663 CDIPTO14735 213 aa12.19□□□□□ -0.46
CLSTN3-216ENST00000545663 SLC16A7O60669 478 aa12.19□□□□□ -0.46
CLSTN3-216ENST00000545663 NDUFB2O95178 105 aa12.19□□□□□ -0.46
CLSTN3-216ENST00000545663 GGT2P36268 569 aa12.19□□□□□ -0.46
CLSTN3-216ENST00000545663 GSSP48637 474 aa12.19□□□□□ -0.46
CLSTN3-216ENST00000545663 CAV3P56539 151 aa12.19□□□□□ -0.46
CLSTN3-216ENST00000545663 SNAI3Q3KNW1 292 aa12.19□□□□□ -0.46
CLSTN3-216ENST00000545663 MESTQ5EB52 335 aa12.19□□□□□ -0.46
CLSTN3-216ENST00000545663 TBPL2Q6SJ96 375 aa12.19□□□□□ -0.46
CLSTN3-216ENST00000545663 DPY19L4Q7Z388 723 aa12.19□□□□□ -0.46
CLSTN3-216ENST00000545663 AQP11Q8NBQ7 271 aa12.19□□□□□ -0.46
CLSTN3-216ENST00000545663 ZNRF1Q8ND25 227 aa12.19□□□□□ -0.46
CLSTN3-216ENST00000545663 KLHL30-AS1Q8NEE0 82 aa12.19□□□□□ -0.46
CLSTN3-216ENST00000545663 GJC3Q8NFK1 279 aa12.19□□□□□ -0.46
CLSTN3-216ENST00000545663 OR1M1Q8NGA1 313 aa12.19□□□□□ -0.46
CLSTN3-216ENST00000545663 ANGPTL6Q8NI99 470 aa12.19□□□□□ -0.46
CLSTN3-216ENST00000545663 MALSU1Q96EH3 234 aa12.19□□□□□ -0.46
CLSTN3-216ENST00000545663 MED30Q96HR3 178 aa12.19□□□□□ -0.46
CLSTN3-216ENST00000545663 FAM46AQ96IP4 442 aaKnown RBP12.19□□□□□ -0.46
CLSTN3-216ENST00000545663 Q96M85 177 aa12.19□□□□□ -0.46
CLSTN3-216ENST00000545663 C8orf4Q9NR00 106 aa12.19□□□□□ -0.46
CLSTN3-216ENST00000545663 MRPL15Q9P015 296 aaKnown RBP12.19□□□□□ -0.46
CLSTN3-216ENST00000545663 POLR1DQ9Y2S0 133 aa12.19□□□□□ -0.46
CLSTN3-216ENST00000545663 KMT2AQ03164 3969 aa12.19□□□□□ -0.46
CLSTN3-216ENST00000545663 BHLHE40O14503 412 aa12.18□□□□□ -0.46
CLSTN3-216ENST00000545663 SIGLEC5O15389 551 aa12.18□□□□□ -0.46
CLSTN3-216ENST00000545663 ARG1P05089 322 aa12.18□□□□□ -0.46
CLSTN3-216ENST00000545663 ACAA1P09110 424 aaPredicted RBP12.18□□□□□ -0.46
CLSTN3-216ENST00000545663 CD24P25063 80 aa12.18□□□□□ -0.46
CLSTN3-216ENST00000545663 GRK5P34947 590 aa12.18□□□□□ -0.46
CLSTN3-216ENST00000545663 GPR4P46093 362 aa12.18□□□□□ -0.46
CLSTN3-216ENST00000545663 VEGFCP49767 419 aa12.18□□□□□ -0.46
CLSTN3-216ENST00000545663 C9orf66Q5T8R8 295 aa12.18□□□□□ -0.46
CLSTN3-216ENST00000545663 GPR139Q6DWJ6 353 aa12.18□□□□□ -0.46
CLSTN3-216ENST00000545663 ZNF770Q6IQ21 691 aaPredicted RBP12.18□□□□□ -0.46
CLSTN3-216ENST00000545663 SMARCD3Q6STE5 483 aa12.18□□□□□ -0.46
CLSTN3-216ENST00000545663 CFAP77Q6ZQR2 320 aa12.18□□□□□ -0.46
CLSTN3-216ENST00000545663 RASSF6Q6ZTQ3 369 aa12.18□□□□□ -0.46
CLSTN3-216ENST00000545663 PQLC1Q8N2U9 271 aa12.18□□□□□ -0.46
CLSTN3-216ENST00000545663 OR52L1Q8NGH7 329 aa12.18□□□□□ -0.46
CLSTN3-216ENST00000545663 TEX12Q9BXU0 123 aa12.18□□□□□ -0.46
CLSTN3-216ENST00000545663 DCLRE1BQ9H816 532 aa12.18□□□□□ -0.46
CLSTN3-216ENST00000545663 VNN3Q9NY84 501 aa12.18□□□□□ -0.46
CLSTN3-216ENST00000545663 BAIAP2Q9UQB8 552 aa12.18□□□□□ -0.46
CLSTN3-216ENST00000545663 HILPDAQ9Y5L2 63 aa12.18□□□□□ -0.46
CLSTN3-216ENST00000545663 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.17□□□□□ -0.46
CLSTN3-216ENST00000545663 PRSS37A4D1T9 235 aa12.17□□□□□ -0.46
CLSTN3-216ENST00000545663 SEC14L6B5MCN3 397 aa12.17□□□□□ -0.46
CLSTN3-216ENST00000545663 H3BNX3 289 aa12.17□□□□□ -0.46
CLSTN3-216ENST00000545663 IDH3BO43837 385 aa12.17□□□□□ -0.46
CLSTN3-216ENST00000545663 AHCYL1O43865 530 aa12.17□□□□□ -0.46
CLSTN3-216ENST00000545663 SNRPBP14678 240 aaKnown RBP12.17□□□□□ -0.46
CLSTN3-216ENST00000545663 CCL3L1P16619 93 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms