RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 H3BNX3 289 aa10.38□□□□□ -0.75
USP28-212ENST00000544750 CDIPTO14735 213 aa10.38□□□□□ -0.75
USP28-212ENST00000544750 XRCC2O43543 280 aa10.38□□□□□ -0.75
USP28-212ENST00000544750 MITFO75030 526 aaPredicted RBP10.38□□□□□ -0.75
USP28-212ENST00000544750 CIB2O75838 187 aa10.38□□□□□ -0.75
USP28-212ENST00000544750 SLC2A1P11166 492 aa10.38□□□□□ -0.75
USP28-212ENST00000544750 SLC2A5P22732 501 aa10.38□□□□□ -0.75
USP28-212ENST00000544750 FASP25445 335 aa10.38□□□□□ -0.75
USP28-212ENST00000544750 EPHA2P29317 976 aa10.38□□□□□ -0.75
USP28-212ENST00000544750 NAA10P41227 235 aaPredicted RBP10.38□□□□□ -0.75
USP28-212ENST00000544750 KLHL12Q53G59 568 aa10.38□□□□□ -0.75
USP28-212ENST00000544750 ZBTB37Q5TC79 503 aa10.38□□□□□ -0.75
USP28-212ENST00000544750 KDM4DQ6B0I6 523 aa10.38□□□□□ -0.75
USP28-212ENST00000544750 SLC16A9Q7RTY1 509 aa10.38□□□□□ -0.75
USP28-212ENST00000544750 DTX3Q8N9I9 347 aa10.38□□□□□ -0.75
USP28-212ENST00000544750 OR10Z1Q8NGY1 313 aa10.38□□□□□ -0.75
USP28-212ENST00000544750 OR8S1Q8NH09 359 aa10.38□□□□□ -0.75
USP28-212ENST00000544750 PYDC1Q8WXC3 89 aa10.38□□□□□ -0.75
USP28-212ENST00000544750 KCNJ15Q99712 375 aa10.38□□□□□ -0.75
USP28-212ENST00000544750 SNTG1Q9NSN8 517 aa10.38□□□□□ -0.75
USP28-212ENST00000544750 SLC25A10Q9UBX3 287 aaPredicted RBP10.38□□□□□ -0.75
USP28-212ENST00000544750 ZNF391Q9UJN7 358 aa10.38□□□□□ -0.75
USP28-212ENST00000544750 RYR2Q92736 4967 aa10.38□□□□□ -0.75
USP28-212ENST00000544750 WI2-2373I1.2A0A1W2PRP0 233 aa10.37□□□□□ -0.75
USP28-212ENST00000544750 ANKRD30BLA7E2S9 258 aa10.37□□□□□ -0.75
USP28-212ENST00000544750 G3V2T6 193 aa10.37□□□□□ -0.75
USP28-212ENST00000544750 EBAG9O00559 213 aa10.37□□□□□ -0.75
USP28-212ENST00000544750 SIGLEC5O15389 551 aa10.37□□□□□ -0.75
USP28-212ENST00000544750 ACAA1P09110 424 aaPredicted RBP10.37□□□□□ -0.75
USP28-212ENST00000544750 FCGR1AP12314 374 aa10.37□□□□□ -0.75
USP28-212ENST00000544750 ZNF823P16415 610 aa10.37□□□□□ -0.75
USP28-212ENST00000544750 FMO3P31513 532 aa10.37□□□□□ -0.75
USP28-212ENST00000544750 ENTPD1P49961 510 aa10.37□□□□□ -0.75
USP28-212ENST00000544750 BMXP51813 675 aa10.37□□□□□ -0.75
USP28-212ENST00000544750 PRKXP51817 358 aa10.37□□□□□ -0.75
USP28-212ENST00000544750 CRISP1P54107 249 aa10.37□□□□□ -0.75
USP28-212ENST00000544750 TEX30Q5JUR7 227 aa10.37□□□□□ -0.75
USP28-212ENST00000544750 PLBD1Q6P4A8 553 aa10.37□□□□□ -0.75
USP28-212ENST00000544750 DCXRQ7Z4W1 244 aa10.37□□□□□ -0.75
USP28-212ENST00000544750 TIGD4Q8IY51 512 aa10.37□□□□□ -0.75
USP28-212ENST00000544750 C11orf42Q8N5U0 333 aa10.37□□□□□ -0.75
USP28-212ENST00000544750 BBS1Q8NFJ9 593 aa10.37□□□□□ -0.75
USP28-212ENST00000544750 OR5D13Q8NGL4 314 aa10.37□□□□□ -0.75
USP28-212ENST00000544750 OR6K6Q8NGW6 343 aa10.37□□□□□ -0.75
USP28-212ENST00000544750 SACSQ9NZJ4 4579 aa10.37□□□□□ -0.75
USP28-212ENST00000544750 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.37□□□□□ -0.75
USP28-212ENST00000544750 hCG_38984A0A1B0GV85 526 aa10.36□□□□□ -0.75
USP28-212ENST00000544750 A0A1W2PQ09 198 aa10.36□□□□□ -0.75
USP28-212ENST00000544750 VGLL3A8MV65 326 aa10.36□□□□□ -0.75
USP28-212ENST00000544750 M0R129 80 aa10.36□□□□□ -0.75
USP28-212ENST00000544750 ANGPTL7O43827 346 aa10.36□□□□□ -0.75
USP28-212ENST00000544750 GLCEO94923 617 aa10.36□□□□□ -0.75
USP28-212ENST00000544750 HMGN1P05114 100 aa10.36□□□□□ -0.75
USP28-212ENST00000544750 SPARCP09486 303 aa10.36□□□□□ -0.75
USP28-212ENST00000544750 CD33P20138 364 aa10.36□□□□□ -0.75
USP28-212ENST00000544750 KRTAP10-11P60412 298 aa10.36□□□□□ -0.75
USP28-212ENST00000544750 ESRRGP62508 458 aa10.36□□□□□ -0.75
USP28-212ENST00000544750 CD83Q01151 205 aa10.36□□□□□ -0.75
USP28-212ENST00000544750 PTGES3Q15185 160 aaKnown RBP10.36□□□□□ -0.75
USP28-212ENST00000544750 FAM76BQ5HYJ3 339 aa10.36□□□□□ -0.75
USP28-212ENST00000544750 PRSS45Q7RTY3 260 aa10.36□□□□□ -0.75
USP28-212ENST00000544750 CPOQ8IVL8 374 aa10.36□□□□□ -0.75
USP28-212ENST00000544750 SGK3Q96BR1 496 aa10.36□□□□□ -0.75
USP28-212ENST00000544750 CENPNQ96H22 339 aaPredicted RBP10.36□□□□□ -0.75
USP28-212ENST00000544750 MED30Q96HR3 178 aa10.36□□□□□ -0.75
USP28-212ENST00000544750 FGF23Q9GZV9 251 aaPredicted RBP10.36□□□□□ -0.75
USP28-212ENST00000544750 ELL3Q9HB65 397 aaPredicted RBP10.36□□□□□ -0.75
USP28-212ENST00000544750 KRT84Q9NSB2 600 aa10.36□□□□□ -0.75
USP28-212ENST00000544750 ZNF222Q9UK12 451 aa10.36□□□□□ -0.75
USP28-212ENST00000544750 OAZ3Q9UMX2 235 aa10.36□□□□□ -0.75
USP28-212ENST00000544750 DNAH7Q8WXX0 4024 aa10.36□□□□□ -0.75
USP28-212ENST00000544750 CCDC182A6NF36 153 aa10.35□□□□□ -0.75
USP28-212ENST00000544750 NKX6-3A6NJ46 265 aa10.35□□□□□ -0.75
USP28-212ENST00000544750 FAM90A8PA6NJQ4 464 aa10.35□□□□□ -0.75
USP28-212ENST00000544750 ZAR1LA6NP61 321 aa10.35□□□□□ -0.75
USP28-212ENST00000544750 PRR23D1E9PI22 279 aaPredicted RBP10.35□□□□□ -0.75
USP28-212ENST00000544750 ZNF593O00488 134 aaPredicted RBP10.35□□□□□ -0.75
USP28-212ENST00000544750 PRODHO43272 600 aa10.35□□□□□ -0.75
USP28-212ENST00000544750 PRKYO43930 277 aa10.35□□□□□ -0.75
USP28-212ENST00000544750 PRR23D2P0DMB1 279 aaPredicted RBP10.35□□□□□ -0.75
USP28-212ENST00000544750 NDUFB7P17568 137 aa10.35□□□□□ -0.75
USP28-212ENST00000544750 PAICSP22234 425 aaKnown RBP10.35□□□□□ -0.75
USP28-212ENST00000544750 GSTT1P30711 240 aa10.35□□□□□ -0.75
USP28-212ENST00000544750 DCTDP32321 178 aa10.35□□□□□ -0.75
USP28-212ENST00000544750 BLVRAP53004 296 aa10.35□□□□□ -0.75
USP28-212ENST00000544750 EFNB1P98172 346 aa10.35□□□□□ -0.75
USP28-212ENST00000544750 BLMHQ13867 455 aa10.35□□□□□ -0.75
USP28-212ENST00000544750 C12orf73Q69YU5 71 aa10.35□□□□□ -0.75
USP28-212ENST00000544750 Q6ZS46 218 aa10.35□□□□□ -0.75
USP28-212ENST00000544750 ZDHHC13Q8IUH4 622 aa10.35□□□□□ -0.75
USP28-212ENST00000544750 ERI1Q8IV48 349 aaKnown RBP10.35□□□□□ -0.75
USP28-212ENST00000544750 MKXQ8IYA7 352 aa10.35□□□□□ -0.75
USP28-212ENST00000544750 DYNAPQ8N1N2 210 aa10.35□□□□□ -0.75
USP28-212ENST00000544750 OR6N2Q8NGY6 317 aa10.35□□□□□ -0.75
USP28-212ENST00000544750 OTULINQ96BN8 352 aa10.35□□□□□ -0.75
USP28-212ENST00000544750 SLAMF6Q96DU3 332 aa10.35□□□□□ -0.75
USP28-212ENST00000544750 INTS14Q96SY0 518 aa10.35□□□□□ -0.75
USP28-212ENST00000544750 AMELYQ99218 206 aa10.35□□□□□ -0.75
USP28-212ENST00000544750 NKX3-1Q99801 234 aaPredicted RBP10.35□□□□□ -0.75
USP28-212ENST00000544750 CIB1Q99828 191 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms