RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 MYRFQ9Y2G1 1151 aa9.47□□□□□ -0.89
YBX3-216ENST00000544622 DAPL1A0PJW8 107 aa9.46□□□□□ -0.9
YBX3-216ENST00000544622 PQLC2LA1A4F0 135 aa9.46□□□□□ -0.9
YBX3-216ENST00000544622 A6NIN4 97 aa9.46□□□□□ -0.9
YBX3-216ENST00000544622 HAX1O00165 279 aa9.46□□□□□ -0.9
YBX3-216ENST00000544622 DVL1O14640 695 aa9.46□□□□□ -0.9
YBX3-216ENST00000544622 CASQ2O14958 399 aaPredicted RBP9.46□□□□□ -0.9
YBX3-216ENST00000544622 NOS1APO75052 506 aaPredicted RBP9.46□□□□□ -0.9
YBX3-216ENST00000544622 ECDO95905 644 aaPredicted RBP9.46□□□□□ -0.9
YBX3-216ENST00000544622 PLATP00750 562 aa9.46□□□□□ -0.9
YBX3-216ENST00000544622 LIPFP07098 398 aa9.46□□□□□ -0.9
YBX3-216ENST00000544622 ACAA1P09110 424 aaPredicted RBP9.46□□□□□ -0.9
YBX3-216ENST00000544622 MMP9P14780 707 aa9.46□□□□□ -0.9
YBX3-216ENST00000544622 MPZP25189 248 aa9.46□□□□□ -0.9
YBX3-216ENST00000544622 CCR9P51686 369 aa9.46□□□□□ -0.9
YBX3-216ENST00000544622 RAB40BQ12829 278 aa9.46□□□□□ -0.9
YBX3-216ENST00000544622 GALEQ14376 348 aa9.46□□□□□ -0.9
YBX3-216ENST00000544622 UBE2V2Q15819 145 aa9.46□□□□□ -0.9
YBX3-216ENST00000544622 ZNF691Q5VV52 312 aa9.46□□□□□ -0.9
YBX3-216ENST00000544622 C9orf139Q6ZV77 190 aa9.46□□□□□ -0.9
YBX3-216ENST00000544622 KCTD8Q6ZWB6 473 aa9.46□□□□□ -0.9
YBX3-216ENST00000544622 RDH10Q8IZV5 341 aa9.46□□□□□ -0.9
YBX3-216ENST00000544622 PACRGLQ8N7B6 248 aa9.46□□□□□ -0.9
YBX3-216ENST00000544622 LY6G5BQ8NDX9 201 aa9.46□□□□□ -0.9
YBX3-216ENST00000544622 CCDC54Q8NEL0 328 aa9.46□□□□□ -0.9
YBX3-216ENST00000544622 OR2G2Q8NGZ5 317 aa9.46□□□□□ -0.9
YBX3-216ENST00000544622 ZFAND2BQ8WV99 257 aa9.46□□□□□ -0.9
YBX3-216ENST00000544622 C10orf35Q96D05 121 aa9.46□□□□□ -0.9
YBX3-216ENST00000544622 DMRTB1Q96MA1 342 aa9.46□□□□□ -0.9
YBX3-216ENST00000544622 CCL13Q99616 98 aa9.46□□□□□ -0.9
YBX3-216ENST00000544622 OCEL1Q9H607 264 aa9.46□□□□□ -0.9
YBX3-216ENST00000544622 AMBNQ9NP70 447 aa9.46□□□□□ -0.9
YBX3-216ENST00000544622 C8orf4Q9NR00 106 aa9.46□□□□□ -0.9
YBX3-216ENST00000544622 GNG8Q9UK08 70 aa9.46□□□□□ -0.9
YBX3-216ENST00000544622 ZNF222Q9UK12 451 aa9.46□□□□□ -0.9
YBX3-216ENST00000544622 ANKRD65E5RJM6 399 aa9.45□□□□□ -0.9
YBX3-216ENST00000544622 GPR37O15354 613 aa9.45□□□□□ -0.9
YBX3-216ENST00000544622 SYT7O43581 403 aa9.45□□□□□ -0.9
YBX3-216ENST00000544622 ENSAO43768 121 aaKnown RBP9.45□□□□□ -0.9
YBX3-216ENST00000544622 FADS2O95864 444 aaKnown RBP9.45□□□□□ -0.9
YBX3-216ENST00000544622 UBCP0CG48 685 aaKnown RBP9.45□□□□□ -0.9
YBX3-216ENST00000544622 IGHV4-38-2P0DP08 117 aa9.45□□□□□ -0.9
YBX3-216ENST00000544622 ERVK11-1P61568 191 aa9.45□□□□□ -0.9
YBX3-216ENST00000544622 ADARB1P78563 741 aaKnown RBP9.45□□□□□ -0.9
YBX3-216ENST00000544622 SMN1Q16637 294 aaKnown RBP9.45□□□□□ -0.9
YBX3-216ENST00000544622 ODF4Q2M2E3 257 aa9.45□□□□□ -0.9
YBX3-216ENST00000544622 OGFRL1Q5TC84 451 aaPredicted RBP9.45□□□□□ -0.9
YBX3-216ENST00000544622 PLCXD3Q63HM9 321 aa9.45□□□□□ -0.9
YBX3-216ENST00000544622 HAGHLQ6PII5 290 aaPredicted RBP9.45□□□□□ -0.9
YBX3-216ENST00000544622 BTN2A1Q7KYR7 527 aa9.45□□□□□ -0.9
YBX3-216ENST00000544622 SLC36A1Q7Z2H8 476 aa9.45□□□□□ -0.9
YBX3-216ENST00000544622 SYS1Q8N2H4 156 aa9.45□□□□□ -0.9
YBX3-216ENST00000544622 FGFRL1Q8N441 504 aa9.45□□□□□ -0.9
YBX3-216ENST00000544622 FAM216BQ8N7L0 139 aa9.45□□□□□ -0.9
YBX3-216ENST00000544622 OR5T2Q8NGG2 359 aa9.45□□□□□ -0.9
YBX3-216ENST00000544622 ZNF671Q8TAW3 534 aa9.45□□□□□ -0.9
YBX3-216ENST00000544622 ZNF418Q8TF45 676 aaPredicted RBP9.45□□□□□ -0.9
YBX3-216ENST00000544622 PELI1Q96FA3 418 aa9.45□□□□□ -0.9
YBX3-216ENST00000544622 TECTBQ96PL2 329 aa9.45□□□□□ -0.9
YBX3-216ENST00000544622 JAM3Q9BX67 310 aa9.45□□□□□ -0.9
YBX3-216ENST00000544622 ISG20L2Q9H9L3 353 aaKnown RBP9.45□□□□□ -0.9
YBX3-216ENST00000544622 HES4Q9HCC6 221 aa9.45□□□□□ -0.9
YBX3-216ENST00000544622 INPP5EQ9NRR6 644 aa9.45□□□□□ -0.9
YBX3-216ENST00000544622 GPR173Q9NS66 373 aa9.45□□□□□ -0.9
YBX3-216ENST00000544622 ERVK13-1Q9NX77 482 aa9.45□□□□□ -0.9
YBX3-216ENST00000544622 RASL12Q9NYN1 266 aa9.45□□□□□ -0.9
YBX3-216ENST00000544622 NLKQ9UBE8 527 aa9.45□□□□□ -0.9
YBX3-216ENST00000544622 ZNF69Q9UC07 566 aa9.45□□□□□ -0.9
YBX3-216ENST00000544622 RPL36Q9Y3U8 105 aaKnown RBP9.45□□□□□ -0.9
YBX3-216ENST00000544622 TENM1Q9UKZ4 2725 aa9.45□□□□□ -0.9
YBX3-216ENST00000544622 IGKV1D-17A0A075B6S4 117 aa9.44□□□□□ -0.9
YBX3-216ENST00000544622 IGKV1-27A0A075B6S5 117 aa9.44□□□□□ -0.9
YBX3-216ENST00000544622 A0A1B0GVI7 797 aa9.44□□□□□ -0.9
YBX3-216ENST00000544622 ANKRD61A6NGH8 418 aa9.44□□□□□ -0.9
YBX3-216ENST00000544622 OR4C45A6NMZ5 311 aa9.44□□□□□ -0.9
YBX3-216ENST00000544622 OR2AT4A6NND4 320 aa9.44□□□□□ -0.9
YBX3-216ENST00000544622 ZNF879B4DU55 563 aa9.44□□□□□ -0.9
YBX3-216ENST00000544622 J3QT63 122 aa9.44□□□□□ -0.9
YBX3-216ENST00000544622 SIGLEC5O15389 551 aa9.44□□□□□ -0.9
YBX3-216ENST00000544622 SYNGR1O43759 233 aa9.44□□□□□ -0.9
YBX3-216ENST00000544622 CLIC3O95833 236 aa9.44□□□□□ -0.9
YBX3-216ENST00000544622 LIMS3P0CW19 117 aa9.44□□□□□ -0.9
YBX3-216ENST00000544622 LIMS4P0CW20 117 aa9.44□□□□□ -0.9
YBX3-216ENST00000544622 PGA5P0DJD9 388 aa9.44□□□□□ -0.9
YBX3-216ENST00000544622 PSG2P11465 335 aa9.44□□□□□ -0.9
YBX3-216ENST00000544622 GLRA1P23415 457 aa9.44□□□□□ -0.9
YBX3-216ENST00000544622 FPR2P25090 351 aa9.44□□□□□ -0.9
YBX3-216ENST00000544622 PEX2P28328 305 aa9.44□□□□□ -0.9
YBX3-216ENST00000544622 HAAOP46952 286 aa9.44□□□□□ -0.9
YBX3-216ENST00000544622 FGF12P61328 243 aa9.44□□□□□ -0.9
YBX3-216ENST00000544622 RCN1Q15293 331 aa9.44□□□□□ -0.9
YBX3-216ENST00000544622 DGUOKQ16854 277 aa9.44□□□□□ -0.9
YBX3-216ENST00000544622 LRRC36Q1X8D7 754 aa9.44□□□□□ -0.9
YBX3-216ENST00000544622 ARMCX4Q5H9R4 360 aa9.44□□□□□ -0.9
YBX3-216ENST00000544622 TMEM244Q5VVB8 128 aa9.44□□□□□ -0.9
YBX3-216ENST00000544622 TTC23Q5W5X9 447 aa9.44□□□□□ -0.9
YBX3-216ENST00000544622 FAM220AQ7Z4H9 259 aa9.44□□□□□ -0.9
YBX3-216ENST00000544622 LHFPL3Q86UP9 236 aa9.44□□□□□ -0.9
YBX3-216ENST00000544622 ZNF573Q86YE8 665 aa9.44□□□□□ -0.9
YBX3-216ENST00000544622 CALHM1Q8IU99 346 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms