RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 ENPP5Q9UJA9 477 aa10.78□□□□□ -0.68
RTN3-213ENST00000543552 IKZF2Q9UKS7 526 aa10.78□□□□□ -0.68
RTN3-213ENST00000543552 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.78□□□□□ -0.68
RTN3-213ENST00000543552 TCRBV3S1A0A5B6 114 aa10.77□□□□□ -0.69
RTN3-213ENST00000543552 MEIOCA2RUB1 952 aa10.77□□□□□ -0.69
RTN3-213ENST00000543552 SLC22A31A6NKX4 558 aa10.77□□□□□ -0.69
RTN3-213ENST00000543552 RNASEK-C17orf49H0YIS7 233 aa10.77□□□□□ -0.69
RTN3-213ENST00000543552 DHRS3O75911 302 aa10.77□□□□□ -0.69
RTN3-213ENST00000543552 MRPL3P09001 348 aaKnown RBP10.77□□□□□ -0.69
RTN3-213ENST00000543552 PRKACGP22612 351 aa10.77□□□□□ -0.69
RTN3-213ENST00000543552 SAA4P35542 130 aa10.77□□□□□ -0.69
RTN3-213ENST00000543552 TGFBR2P37173 567 aa10.77□□□□□ -0.69
RTN3-213ENST00000543552 CAPZA1P52907 286 aa10.77□□□□□ -0.69
RTN3-213ENST00000543552 CRISP1P54107 249 aa10.77□□□□□ -0.69
RTN3-213ENST00000543552 ESRRGP62508 458 aa10.77□□□□□ -0.69
RTN3-213ENST00000543552 ELF3P78545 371 aaPredicted RBP10.77□□□□□ -0.69
RTN3-213ENST00000543552 DGUOKQ16854 277 aa10.77□□□□□ -0.69
RTN3-213ENST00000543552 CEP78Q5JTW2 689 aa10.77□□□□□ -0.69
RTN3-213ENST00000543552 TMEM236Q5W0B7 351 aa10.77□□□□□ -0.69
RTN3-213ENST00000543552 ZNF573Q86YE8 665 aa10.77□□□□□ -0.69
RTN3-213ENST00000543552 TMEM185AQ8NFB2 350 aa10.77□□□□□ -0.69
RTN3-213ENST00000543552 OR51E1Q8TCB6 317 aa10.77□□□□□ -0.69
RTN3-213ENST00000543552 OR8B4Q96RC9 309 aa10.77□□□□□ -0.69
RTN3-213ENST00000543552 MMP27Q9H306 513 aa10.77□□□□□ -0.69
RTN3-213ENST00000543552 GPR84Q9NQS5 396 aa10.77□□□□□ -0.69
RTN3-213ENST00000543552 H2AFY2Q9P0M6 372 aaPredicted RBP10.77□□□□□ -0.69
RTN3-213ENST00000543552 POMPQ9Y244 141 aa10.77□□□□□ -0.69
RTN3-213ENST00000543552 PIGLQ9Y2B2 252 aa10.77□□□□□ -0.69
RTN3-213ENST00000543552 POLDIP2Q9Y2S7 368 aa10.77□□□□□ -0.69
RTN3-213ENST00000543552 SF3B6Q9Y3B4 125 aaKnown RBP10.77□□□□□ -0.69
RTN3-213ENST00000543552 CMYA5Q8N3K9 4069 aa10.76□□□□□ -0.69
RTN3-213ENST00000543552 hCG_1809904A0A1W2PP81 198 aa10.76□□□□□ -0.69
RTN3-213ENST00000543552 A0A1W2PPE2 198 aa10.76□□□□□ -0.69
RTN3-213ENST00000543552 A0A1W2PR64 198 aa10.76□□□□□ -0.69
RTN3-213ENST00000543552 A0A1W2PRV1 198 aa10.76□□□□□ -0.69
RTN3-213ENST00000543552 LOC110117498-PIK3R3F6TDL0 507 aa10.76□□□□□ -0.69
RTN3-213ENST00000543552 H0YAE9 185 aa10.76□□□□□ -0.69
RTN3-213ENST00000543552 SLC1A7O00341 560 aa10.76□□□□□ -0.69
RTN3-213ENST00000543552 DNAJC8O75937 253 aaPredicted RBP10.76□□□□□ -0.69
RTN3-213ENST00000543552 CLPXO76031 633 aa10.76□□□□□ -0.69
RTN3-213ENST00000543552 PSG2P11465 335 aa10.76□□□□□ -0.69
RTN3-213ENST00000543552 SELLP14151 372 aa10.76□□□□□ -0.69
RTN3-213ENST00000543552 AMY2BP19961 511 aa10.76□□□□□ -0.69
RTN3-213ENST00000543552 PTGES3Q15185 160 aaKnown RBP10.76□□□□□ -0.69
RTN3-213ENST00000543552 MIDNQ504T8 468 aa10.76□□□□□ -0.69
RTN3-213ENST00000543552 BCL2L15Q5TBC7 163 aa10.76□□□□□ -0.69
RTN3-213ENST00000543552 FAHD1Q6P587 224 aa10.76□□□□□ -0.69
RTN3-213ENST00000543552 HAGHLQ6PII5 290 aaPredicted RBP10.76□□□□□ -0.69
RTN3-213ENST00000543552 MOB3CQ70IA8 216 aa10.76□□□□□ -0.69
RTN3-213ENST00000543552 GID4Q8IVV7 300 aa10.76□□□□□ -0.69
RTN3-213ENST00000543552 Q8N7P7 452 aa10.76□□□□□ -0.69
RTN3-213ENST00000543552 ZSCAN4Q8NAM6 433 aaPredicted RBP10.76□□□□□ -0.69
RTN3-213ENST00000543552 LINC01006Q8NI28 216 aa10.76□□□□□ -0.69
RTN3-213ENST00000543552 UBE2FQ969M7 185 aa10.76□□□□□ -0.69
RTN3-213ENST00000543552 DUS3LQ96G46 650 aaKnown RBP10.76□□□□□ -0.69
RTN3-213ENST00000543552 SDSLQ96GA7 329 aa10.76□□□□□ -0.69
RTN3-213ENST00000543552 FGF23Q9GZV9 251 aaPredicted RBP10.76□□□□□ -0.69
RTN3-213ENST00000543552 FAM234AQ9H0X4 552 aa10.76□□□□□ -0.69
RTN3-213ENST00000543552 C16orf95Q9H693 158 aa10.76□□□□□ -0.69
RTN3-213ENST00000543552 KRT84Q9NSB2 600 aa10.76□□□□□ -0.69
RTN3-213ENST00000543552 GTF2A1LQ9UNN4 478 aa10.76□□□□□ -0.69
RTN3-213ENST00000543552 VWFP04275 2813 aa10.75□□□□□ -0.69
RTN3-213ENST00000543552 IGKV1D-17A0A075B6S4 117 aa10.75□□□□□ -0.69
RTN3-213ENST00000543552 CCDC182A6NF36 153 aa10.75□□□□□ -0.69
RTN3-213ENST00000543552 ANKRD61A6NGH8 418 aa10.75□□□□□ -0.69
RTN3-213ENST00000543552 DHRS7CA6NNS2 312 aa10.75□□□□□ -0.69
RTN3-213ENST00000543552 J3QT63 122 aa10.75□□□□□ -0.69
RTN3-213ENST00000543552 PSMD9O00233 223 aa10.75□□□□□ -0.69
RTN3-213ENST00000543552 RHBDL1O75783 438 aa10.75□□□□□ -0.69
RTN3-213ENST00000543552 NRASP01111 189 aa10.75□□□□□ -0.69
RTN3-213ENST00000543552 IGLV3-1P01715 115 aa10.75□□□□□ -0.69
RTN3-213ENST00000543552 FAHP16930 419 aa10.75□□□□□ -0.69
RTN3-213ENST00000543552 HCCSP53701 268 aa10.75□□□□□ -0.69
RTN3-213ENST00000543552 PROK1P58294 105 aa10.75□□□□□ -0.69
RTN3-213ENST00000543552 KLRD1Q13241 179 aa10.75□□□□□ -0.69
RTN3-213ENST00000543552 TAF9Q16594 264 aa10.75□□□□□ -0.69
RTN3-213ENST00000543552 CLVS2Q5SYC1 327 aa10.75□□□□□ -0.69
RTN3-213ENST00000543552 ZNF322Q6U7Q0 402 aaPredicted RBP10.75□□□□□ -0.69
RTN3-213ENST00000543552 MEPCEQ7L2J0 689 aaKnown RBP10.75□□□□□ -0.69
RTN3-213ENST00000543552 FAM185AQ8N0U4 392 aa10.75□□□□□ -0.69
RTN3-213ENST00000543552 ZNF561Q8N587 486 aa10.75□□□□□ -0.69
RTN3-213ENST00000543552 DTX3Q8N9I9 347 aa10.75□□□□□ -0.69
RTN3-213ENST00000543552 POC1AQ8NBT0 407 aa10.75□□□□□ -0.69
RTN3-213ENST00000543552 OR5K1Q8NHB7 308 aa10.75□□□□□ -0.69
RTN3-213ENST00000543552 BCAS4Q8TDM0 211 aa10.75□□□□□ -0.69
RTN3-213ENST00000543552 AQP3Q92482 292 aa10.75□□□□□ -0.69
RTN3-213ENST00000543552 SEMA6AQ9H2E6 1030 aa10.75□□□□□ -0.69
RTN3-213ENST00000543552 TCF7L1Q9HCS4 588 aa10.75□□□□□ -0.69
RTN3-213ENST00000543552 A0A1W2PRD5 423 aa10.74□□□□□ -0.69
RTN3-213ENST00000543552 A0A1W2PRF3 423 aa10.74□□□□□ -0.69
RTN3-213ENST00000543552 A0A1W2PRM7 423 aa10.74□□□□□ -0.69
RTN3-213ENST00000543552 ZNF670-ZNF695F2Z2N8 137 aa10.74□□□□□ -0.69
RTN3-213ENST00000543552 DLGAP1O14490 977 aa10.74□□□□□ -0.69
RTN3-213ENST00000543552 KCNAB3O43448 404 aa10.74□□□□□ -0.69
RTN3-213ENST00000543552 ANGPTL7O43827 346 aa10.74□□□□□ -0.69
RTN3-213ENST00000543552 PRKYO43930 277 aa10.74□□□□□ -0.69
RTN3-213ENST00000543552 HAAOP46952 286 aa10.74□□□□□ -0.69
RTN3-213ENST00000543552 CXCR4P61073 352 aa10.74□□□□□ -0.69
RTN3-213ENST00000543552 DEFA6Q01524 100 aa10.74□□□□□ -0.69
RTN3-213ENST00000543552 EGR3Q06889 387 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms