RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 AMER3Q8N944 861 aa11.73□□□□□ -0.53
TNC-212ENST00000542877 FAHD2AQ96GK7 314 aa11.73□□□□□ -0.53
TNC-212ENST00000542877 TRAPPC1Q9Y5R8 145 aa11.73□□□□□ -0.53
TNC-212ENST00000542877 POMT1Q9Y6A1 747 aa11.73□□□□□ -0.53
TNC-212ENST00000542877 METTL12A8MUP2 240 aa11.72□□□□□ -0.53
TNC-212ENST00000542877 SLC37A1P57057 533 aa11.72□□□□□ -0.53
TNC-212ENST00000542877 ZNF141Q15928 474 aa11.72□□□□□ -0.53
TNC-212ENST00000542877 IQCJQ1A5X6 159 aa11.72□□□□□ -0.53
TNC-212ENST00000542877 C9orf152Q5JTZ5 239 aa11.72□□□□□ -0.53
TNC-212ENST00000542877 NARFLQ9H6Q4 476 aa11.72□□□□□ -0.53
TNC-212ENST00000542877 ZNF275Q9NSD4 429 aaPredicted RBP11.72□□□□□ -0.53
TNC-212ENST00000542877 HSBP1O75506 76 aa11.72□□□□□ -0.53
TNC-212ENST00000542877 DMRTC1Q5HYR2 192 aa11.72□□□□□ -0.53
TNC-212ENST00000542877 DMKNQ6E0U4 476 aaPredicted RBP11.72□□□□□ -0.53
TNC-212ENST00000542877 LINC01555Q8NAE3 123 aa11.72□□□□□ -0.53
TNC-212ENST00000542877 ZG16BQ96DA0 208 aa11.72□□□□□ -0.53
TNC-212ENST00000542877 ZNF426Q9BUY5 554 aa11.72□□□□□ -0.53
TNC-212ENST00000542877 BARX1Q9HBU1 254 aaPredicted RBP11.72□□□□□ -0.53
TNC-212ENST00000542877 ONECUT2O95948 504 aa11.72□□□□□ -0.53
TNC-212ENST00000542877 CDKN2AP42771 156 aaKnown RBP11.72□□□□□ -0.53
TNC-212ENST00000542877 LIMK1P53667 647 aa11.72□□□□□ -0.53
TNC-212ENST00000542877 FMODQ06828 376 aa11.72□□□□□ -0.53
TNC-212ENST00000542877 ZNF66Q6ZN08 573 aa11.72□□□□□ -0.53
TNC-212ENST00000542877 NHLRC2Q8NBF2 726 aa11.72□□□□□ -0.53
TNC-212ENST00000542877 ZNF784Q8NCA9 323 aaPredicted RBP11.72□□□□□ -0.53
TNC-212ENST00000542877 ALG1L2C9J202 215 aa11.72□□□□□ -0.53
TNC-212ENST00000542877 METAP1P53582 386 aa11.72□□□□□ -0.53
TNC-212ENST00000542877 PRR27Q6MZM9 219 aa11.72□□□□□ -0.53
TNC-212ENST00000542877 C19orf35Q6ZS72 473 aa11.72□□□□□ -0.53
TNC-212ENST00000542877 NAA60Q9H7X0 242 aa11.72□□□□□ -0.53
TNC-212ENST00000542877 MMP7P09237 267 aaPredicted RBP11.71□□□□□ -0.53
TNC-212ENST00000542877 FABP4P15090 132 aa11.71□□□□□ -0.53
TNC-212ENST00000542877 OR2A5Q96R48 311 aa11.71□□□□□ -0.53
TNC-212ENST00000542877 FER1L6Q2WGJ9 1857 aa11.71□□□□□ -0.53
TNC-212ENST00000542877 TRGV10A0A0A0MS01 117 aa11.71□□□□□ -0.53
TNC-212ENST00000542877 RRP8O43159 456 aaKnown RBP11.71□□□□□ -0.53
TNC-212ENST00000542877 CDC14BO60729 498 aa11.71□□□□□ -0.53
TNC-212ENST00000542877 CTSVO60911 334 aa11.71□□□□□ -0.53
TNC-212ENST00000542877 PAX6P26367 422 aa11.71□□□□□ -0.53
TNC-212ENST00000542877 SMAD4Q13485 552 aaKnown RBP11.71□□□□□ -0.53
TNC-212ENST00000542877 THSD4Q6ZMP0 1018 aa11.71□□□□□ -0.53
TNC-212ENST00000542877 ALG14Q96F25 216 aa11.71□□□□□ -0.53
TNC-212ENST00000542877 VAMP8Q9BV40 100 aa11.71□□□□□ -0.53
TNC-212ENST00000542877 SIRT3Q9NTG7 399 aaPredicted RBP11.71□□□□□ -0.53
TNC-212ENST00000542877 TIMM9Q9Y5J7 89 aa11.71□□□□□ -0.53
TNC-212ENST00000542877 RGS7BPQ6MZT1 257 aaPredicted RBP11.71□□□□□ -0.53
TNC-212ENST00000542877 NHLRC1Q6VVB1 395 aa11.71□□□□□ -0.53
TNC-212ENST00000542877 FGF14Q92915 247 aa11.71□□□□□ -0.53
TNC-212ENST00000542877 PCED1AQ9H1Q7 454 aa11.71□□□□□ -0.53
TNC-212ENST00000542877 ZNF230Q9UIE0 474 aaPredicted RBP11.71□□□□□ -0.53
TNC-212ENST00000542877 V9GYH0 126 aa11.71□□□□□ -0.53
TNC-212ENST00000542877 ADAM20O43506 726 aa11.71□□□□□ -0.54
TNC-212ENST00000542877 INHBBP09529 407 aa11.71□□□□□ -0.54
TNC-212ENST00000542877 SNRPEP62304 92 aaKnown RBP11.71□□□□□ -0.54
TNC-212ENST00000542877 IGFBP7Q16270 282 aa11.71□□□□□ -0.54
TNC-212ENST00000542877 TMEM241Q24JQ0 296 aa11.71□□□□□ -0.54
TNC-212ENST00000542877 GGNBP1Q5YKI7 109 aa11.71□□□□□ -0.54
TNC-212ENST00000542877 JMJD6Q6NYC1 403 aaPredicted RBP11.71□□□□□ -0.54
TNC-212ENST00000542877 C8orf82Q6P1X6 216 aaPredicted RBP11.71□□□□□ -0.54
TNC-212ENST00000542877 MRGPREQ86SM8 312 aa11.71□□□□□ -0.54
TNC-212ENST00000542877 SPEM1Q8N4L4 309 aa11.71□□□□□ -0.54
TNC-212ENST00000542877 UBAC2Q8NBM4 344 aa11.71□□□□□ -0.54
TNC-212ENST00000542877 OR5C1Q8NGR4 320 aa11.71□□□□□ -0.54
TNC-212ENST00000542877 ZNF707Q96C28 371 aaPredicted RBP11.71□□□□□ -0.54
TNC-212ENST00000542877 C3orf85A0A1B0GTC6 90 aa11.7□□□□□ -0.54
TNC-212ENST00000542877 SEMG1P04279 462 aa11.7□□□□□ -0.54
TNC-212ENST00000542877 OR10D4PQ8NGN7 298 aa11.7□□□□□ -0.54
TNC-212ENST00000542877 MRGPRX3Q96LB0 322 aa11.7□□□□□ -0.54
TNC-212ENST00000542877 RNF24Q9Y225 148 aa11.7□□□□□ -0.54
TNC-212ENST00000542877 LSM2Q9Y333 95 aaKnown RBP11.7□□□□□ -0.54
TNC-212ENST00000542877 CDC42EP2O14613 210 aa11.7□□□□□ -0.54
TNC-212ENST00000542877 OGG1O15527 345 aa11.7□□□□□ -0.54
TNC-212ENST00000542877 ITGBL1O95965 494 aaPredicted RBP11.7□□□□□ -0.54
TNC-212ENST00000542877 KRASP01116 189 aa11.7□□□□□ -0.54
TNC-212ENST00000542877 COL13A1Q5TAT6 717 aaPredicted RBP11.7□□□□□ -0.54
TNC-212ENST00000542877 SSX7Q7RTT5 188 aa11.7□□□□□ -0.54
TNC-212ENST00000542877 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.7□□□□□ -0.54
TNC-212ENST00000542877 RER1O15258 196 aa11.7□□□□□ -0.54
TNC-212ENST00000542877 YBX1P67809 324 aaKnown RBP11.7□□□□□ -0.54
TNC-212ENST00000542877 SLC38A11Q08AI6 406 aa11.7□□□□□ -0.54
TNC-212ENST00000542877 EID2BQ96D98 161 aa11.7□□□□□ -0.54
TNC-212ENST00000542877 HOXC4P09017 264 aaPredicted RBP11.7□□□□□ -0.54
TNC-212ENST00000542877 GABRG2P18507 467 aa11.7□□□□□ -0.54
TNC-212ENST00000542877 MDH2P40926 338 aaKnown RBP11.7□□□□□ -0.54
TNC-212ENST00000542877 LHX8Q68G74 356 aa11.7□□□□□ -0.54
TNC-212ENST00000542877 OR2C3Q8N628 320 aa11.7□□□□□ -0.54
TNC-212ENST00000542877 SCMH1Q96GD3 660 aa11.7□□□□□ -0.54
TNC-212ENST00000542877 VN1R1Q9GZP7 353 aa11.7□□□□□ -0.54
TNC-212ENST00000542877 NXF2Q9GZY0 626 aaKnown RBP11.7□□□□□ -0.54
TNC-212ENST00000542877 PIAS2O75928 621 aa11.7□□□□□ -0.54
TNC-212ENST00000542877 GALR1P47211 349 aa11.7□□□□□ -0.54
TNC-212ENST00000542877 ZIC1Q15915 447 aa11.7□□□□□ -0.54
TNC-212ENST00000542877 FFAR4Q5NUL3 377 aa11.7□□□□□ -0.54
TNC-212ENST00000542877 C17orf78Q8N4C9 275 aa11.7□□□□□ -0.54
TNC-212ENST00000542877 TMEM230Q96A57 120 aa11.7□□□□□ -0.54
TNC-212ENST00000542877 PARD6AQ9NPB6 346 aa11.7□□□□□ -0.54
TNC-212ENST00000542877 TOX4O94842 621 aa11.69□□□□□ -0.54
TNC-212ENST00000542877 HNRNPA3P51991 378 aaKnown RBP11.69□□□□□ -0.54
TNC-212ENST00000542877 PRDX4Q13162 271 aa11.69□□□□□ -0.54
TNC-212ENST00000542877 OR5I1Q13606 314 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms