RNA–Protein interactions for RNA: ENST00000542663.1

CLSTN3-214, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-214ENST00000542663 MTRF1O75570 445 aaKnown RBP14.34□□□□□ -0.11
CLSTN3-214ENST00000542663 GASTP01350 101 aa14.34□□□□□ -0.11
CLSTN3-214ENST00000542663 FAHP16930 419 aa14.34□□□□□ -0.11
CLSTN3-214ENST00000542663 CAPZA1P52907 286 aa14.34□□□□□ -0.11
CLSTN3-214ENST00000542663 BLVRAP53004 296 aa14.34□□□□□ -0.11
CLSTN3-214ENST00000542663 KRTAP10-11P60412 298 aa14.34□□□□□ -0.11
CLSTN3-214ENST00000542663 RPL31P62899 125 aaKnown RBP14.34□□□□□ -0.11
CLSTN3-214ENST00000542663 BLCAPP62952 87 aa14.34□□□□□ -0.11
CLSTN3-214ENST00000542663 CD83Q01151 205 aa14.34□□□□□ -0.11
CLSTN3-214ENST00000542663 ZNF273Q14593 569 aa14.34□□□□□ -0.11
CLSTN3-214ENST00000542663 ZNF782Q6ZMW2 699 aaPredicted RBP14.34□□□□□ -0.11
CLSTN3-214ENST00000542663 THAP5Q7Z6K1 395 aa14.34□□□□□ -0.11
CLSTN3-214ENST00000542663 MCUR1Q96AQ8 359 aa14.34□□□□□ -0.11
CLSTN3-214ENST00000542663 PRSS22Q9GZN4 317 aa14.34□□□□□ -0.11
CLSTN3-214ENST00000542663 USE1Q9NZ43 259 aa14.34□□□□□ -0.11
CLSTN3-214ENST00000542663 ODF3BA8MYP8 253 aa14.33□□□□□ -0.12
CLSTN3-214ENST00000542663 ZNF732B4DXR9 585 aa14.33□□□□□ -0.12
CLSTN3-214ENST00000542663 GMNNO75496 209 aa14.33□□□□□ -0.12
CLSTN3-214ENST00000542663 GLCEO94923 617 aa14.33□□□□□ -0.12
CLSTN3-214ENST00000542663 H2BFMP0C1H6 154 aa14.33□□□□□ -0.12
CLSTN3-214ENST00000542663 MSX2P35548 267 aaPredicted RBP14.33□□□□□ -0.12
CLSTN3-214ENST00000542663 DLX6P56179 175 aa14.33□□□□□ -0.12
CLSTN3-214ENST00000542663 CEP78Q5JTW2 689 aa14.33□□□□□ -0.12
CLSTN3-214ENST00000542663 ACP7Q6ZNF0 438 aa14.33□□□□□ -0.12
CLSTN3-214ENST00000542663 KRT74Q7RTS7 529 aa14.33□□□□□ -0.12
CLSTN3-214ENST00000542663 OR4M1Q8NGD0 313 aa14.33□□□□□ -0.12
CLSTN3-214ENST00000542663 OR8B12Q8NGG6 310 aa14.33□□□□□ -0.12
CLSTN3-214ENST00000542663 AQP3Q92482 292 aa14.33□□□□□ -0.12
CLSTN3-214ENST00000542663 ARMC1Q9NVT9 282 aa14.33□□□□□ -0.12
CLSTN3-214ENST00000542663 FAM183AA6NL82 134 aa14.32□□□□□ -0.12
CLSTN3-214ENST00000542663 RFPL4AA6NLU0 287 aa14.32□□□□□ -0.12
CLSTN3-214ENST00000542663 RFPL4AL1F8VTS6 287 aa14.32□□□□□ -0.12
CLSTN3-214ENST00000542663 CCDC22O60826 627 aa14.32□□□□□ -0.12
CLSTN3-214ENST00000542663 SASH3O75995 380 aa14.32□□□□□ -0.12
CLSTN3-214ENST00000542663 SOX14O95416 240 aa14.32□□□□□ -0.12
CLSTN3-214ENST00000542663 JUNBP17275 347 aaPredicted RBP14.32□□□□□ -0.12
CLSTN3-214ENST00000542663 PAICSP22234 425 aaKnown RBP14.32□□□□□ -0.12
CLSTN3-214ENST00000542663 GSTT1P30711 240 aa14.32□□□□□ -0.12
CLSTN3-214ENST00000542663 CEBPDP49716 269 aaPredicted RBP14.32□□□□□ -0.12
CLSTN3-214ENST00000542663 GNG3P63215 75 aa14.32□□□□□ -0.12
CLSTN3-214ENST00000542663 TCTEX1D4Q5JR98 221 aa14.32□□□□□ -0.12
CLSTN3-214ENST00000542663 OR2T27Q8NH04 317 aa14.32□□□□□ -0.12
CLSTN3-214ENST00000542663 RPS4Y2Q8TD47 263 aa14.32□□□□□ -0.12
CLSTN3-214ENST00000542663 OCSTAMPQ9BR26 566 aa14.32□□□□□ -0.12
CLSTN3-214ENST00000542663 MUC13Q9H3R2 512 aa14.32□□□□□ -0.12
CLSTN3-214ENST00000542663 MAGEL2Q9UJ55 1249 aa14.32□□□□□ -0.12
CLSTN3-214ENST00000542663 BAIAP2Q9UQB8 552 aa14.32□□□□□ -0.12
CLSTN3-214ENST00000542663 A0A1W2PPH5 198 aa14.31□□□□□ -0.12
CLSTN3-214ENST00000542663 ARPC2O15144 300 aa14.31□□□□□ -0.12
CLSTN3-214ENST00000542663 PEX14O75381 377 aa14.31□□□□□ -0.12
CLSTN3-214ENST00000542663 KRT36O76013 467 aa14.31□□□□□ -0.12
CLSTN3-214ENST00000542663 HSD17B1P14061 328 aa14.31□□□□□ -0.12
CLSTN3-214ENST00000542663 VDAC2P45880 294 aaPredicted RBP14.31□□□□□ -0.12
CLSTN3-214ENST00000542663 SSX2Q16385 188 aa14.31□□□□□ -0.12
CLSTN3-214ENST00000542663 CEACAM21Q3KPI0 293 aa14.31□□□□□ -0.12
CLSTN3-214ENST00000542663 DEFB121Q5J5C9 76 aa14.31□□□□□ -0.12
CLSTN3-214ENST00000542663 SHFQ7M4L6 423 aa14.31□□□□□ -0.12
CLSTN3-214ENST00000542663 ZNF561Q8N587 486 aa14.31□□□□□ -0.12
CLSTN3-214ENST00000542663 OR2T33Q8NG76 320 aa14.31□□□□□ -0.12
CLSTN3-214ENST00000542663 OR5AU1Q8NGC0 362 aa14.31□□□□□ -0.12
CLSTN3-214ENST00000542663 ZNF671Q8TAW3 534 aa14.31□□□□□ -0.12
CLSTN3-214ENST00000542663 MALSU1Q96EH3 234 aa14.31□□□□□ -0.12
CLSTN3-214ENST00000542663 ZNF488Q96MN9 340 aa14.31□□□□□ -0.12
CLSTN3-214ENST00000542663 WWC2-AS2Q96NR7 200 aa14.31□□□□□ -0.12
CLSTN3-214ENST00000542663 HIST1H2AAQ96QV6 131 aa14.31□□□□□ -0.12
CLSTN3-214ENST00000542663 CMC2Q9NRP2 79 aa14.31□□□□□ -0.12
CLSTN3-214ENST00000542663 RASL12Q9NYN1 266 aa14.31□□□□□ -0.12
CLSTN3-214ENST00000542663 PITPNC1Q9UKF7 332 aa14.31□□□□□ -0.12
CLSTN3-214ENST00000542663 TBL2Q9Y4P3 447 aaKnown RBP14.31□□□□□ -0.12
CLSTN3-214ENST00000542663 hCG_1809904A0A1W2PP81 198 aa14.3□□□□□ -0.12
CLSTN3-214ENST00000542663 A0A1W2PPE2 198 aa14.3□□□□□ -0.12
CLSTN3-214ENST00000542663 A0A1W2PR64 198 aa14.3□□□□□ -0.12
CLSTN3-214ENST00000542663 A0A1W2PRV1 198 aa14.3□□□□□ -0.12
CLSTN3-214ENST00000542663 C17orf98A8MV24 154 aa14.3□□□□□ -0.12
CLSTN3-214ENST00000542663 TNFRSF11BO00300 401 aa14.3□□□□□ -0.12
CLSTN3-214ENST00000542663 ARG1P05089 322 aa14.3□□□□□ -0.12
CLSTN3-214ENST00000542663 ZNF3P17036 446 aa14.3□□□□□ -0.12
CLSTN3-214ENST00000542663 PSMA6P60900 246 aaKnown RBP14.3□□□□□ -0.12
CLSTN3-214ENST00000542663 PPP1R8Q12972 351 aaKnown RBP14.3□□□□□ -0.12
CLSTN3-214ENST00000542663 ZNF626Q68DY1 528 aa14.3□□□□□ -0.12
CLSTN3-214ENST00000542663 HAGHLQ6PII5 290 aaPredicted RBP14.3□□□□□ -0.12
CLSTN3-214ENST00000542663 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.3□□□□□ -0.12
CLSTN3-214ENST00000542663 AQP11Q8NBQ7 271 aa14.3□□□□□ -0.12
CLSTN3-214ENST00000542663 POC1AQ8NBT0 407 aa14.3□□□□□ -0.12
CLSTN3-214ENST00000542663 OTOSQ8NHW6 89 aa14.3□□□□□ -0.12
CLSTN3-214ENST00000542663 FOXRED1Q96CU9 486 aaPredicted RBP14.3□□□□□ -0.12
CLSTN3-214ENST00000542663 NSMCE2Q96MF7 247 aa14.3□□□□□ -0.12
CLSTN3-214ENST00000542663 ABCB10Q9NRK6 738 aa14.3□□□□□ -0.12
CLSTN3-214ENST00000542663 KLHDC2Q9Y2U9 406 aa14.3□□□□□ -0.12
CLSTN3-214ENST00000542663 RIIAD1A6NNX1 92 aa14.29□□□□□ -0.12
CLSTN3-214ENST00000542663 SLC1A7O00341 560 aa14.29□□□□□ -0.12
CLSTN3-214ENST00000542663 SYNGR1O43759 233 aa14.29□□□□□ -0.12
CLSTN3-214ENST00000542663 SELENOFO60613 162 aa14.29□□□□□ -0.12
CLSTN3-214ENST00000542663 IFNGP01579 166 aa14.29□□□□□ -0.12
CLSTN3-214ENST00000542663 LYNP07948 512 aa14.29□□□□□ -0.12
CLSTN3-214ENST00000542663 PF4V1P10720 104 aa14.29□□□□□ -0.12
CLSTN3-214ENST00000542663 PRDX2P32119 198 aa14.29□□□□□ -0.12
CLSTN3-214ENST00000542663 MAP2K3P46734 347 aa14.29□□□□□ -0.12
CLSTN3-214ENST00000542663 DYNLT3P51808 116 aa14.29□□□□□ -0.12
CLSTN3-214ENST00000542663 SLC35A2P78381 396 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms