RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 CCR9P51686 369 aa6.67□□□□□ -1.34
AC005840.3-201ENST00000541888 GRB2P62993 217 aaKnown RBP6.67□□□□□ -1.34
AC005840.3-201ENST00000541888 ZNF92Q03936 586 aa6.67□□□□□ -1.34
AC005840.3-201ENST00000541888 P2RY14Q15391 338 aa6.67□□□□□ -1.34
AC005840.3-201ENST00000541888 EIF2S3LQ2VIR3 472 aaKnown RBP6.67□□□□□ -1.34
AC005840.3-201ENST00000541888 SLC36A2Q495M3 483 aa6.67□□□□□ -1.34
AC005840.3-201ENST00000541888 RNASE12Q5GAN4 147 aaKnown RBP6.67□□□□□ -1.34
AC005840.3-201ENST00000541888 SFXN4Q6P4A7 337 aa6.67□□□□□ -1.34
AC005840.3-201ENST00000541888 ANKRD16Q6P6B7 361 aa6.67□□□□□ -1.34
AC005840.3-201ENST00000541888 UNQ9370/PRO34162Q6UXP9 181 aa6.67□□□□□ -1.34
AC005840.3-201ENST00000541888 LRRTM1Q86UE6 522 aa6.67□□□□□ -1.34
AC005840.3-201ENST00000541888 IZUMO1Q8IYV9 350 aa6.67□□□□□ -1.34
AC005840.3-201ENST00000541888 LINC00518Q8N0U6 118 aa6.67□□□□□ -1.34
AC005840.3-201ENST00000541888 Q8N402 240 aa6.67□□□□□ -1.34
AC005840.3-201ENST00000541888 RELL2Q8NC24 303 aaPredicted RBP6.67□□□□□ -1.34
AC005840.3-201ENST00000541888 OR5D18Q8NGL1 313 aa6.67□□□□□ -1.34
AC005840.3-201ENST00000541888 OR6K3Q8NGY3 331 aa6.67□□□□□ -1.34
AC005840.3-201ENST00000541888 TRMT10AQ8TBZ6 339 aaKnown RBP6.67□□□□□ -1.34
AC005840.3-201ENST00000541888 GCDHQ92947 438 aaPredicted RBP6.67□□□□□ -1.34
AC005840.3-201ENST00000541888 SGK3Q96BR1 496 aa6.67□□□□□ -1.34
AC005840.3-201ENST00000541888 S100PBPQ96BU1 408 aa6.67□□□□□ -1.34
AC005840.3-201ENST00000541888 HDHD2Q9H0R4 259 aa6.67□□□□□ -1.34
AC005840.3-201ENST00000541888 HEXA-AS1Q9H8Q6 139 aa6.67□□□□□ -1.34
AC005840.3-201ENST00000541888 TCF7L1Q9HCS4 588 aa6.67□□□□□ -1.34
AC005840.3-201ENST00000541888 SLC17A5Q9NRA2 495 aa6.67□□□□□ -1.34
AC005840.3-201ENST00000541888 PLSCR4Q9NRQ2 329 aa6.67□□□□□ -1.34
AC005840.3-201ENST00000541888 HHLA2Q9UM44 414 aa6.67□□□□□ -1.34
AC005840.3-201ENST00000541888 MAB21L2Q9Y586 359 aa6.67□□□□□ -1.34
AC005840.3-201ENST00000541888 KLF2Q9Y5W3 355 aaPredicted RBP6.67□□□□□ -1.34
AC005840.3-201ENST00000541888 SPTBN1Q01082 2364 aaKnown RBP6.67□□□□□ -1.34
AC005840.3-201ENST00000541888 TRBV5-7A0A0A0MS05 114 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 FABP7O15540 132 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 TSC22D2O75157 780 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 SCO1O75880 301 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 PLATP00750 562 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 EIF4EP06730 217 aaKnown RBP6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 PTHLHP12272 177 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 CCKARP32238 428 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 MTNR1BP49286 362 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 RAG2P55895 527 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 FLI1Q01543 452 aaPredicted RBP6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 ZNF273Q14593 569 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 ST3GAL2Q16842 350 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 OR2A2Q6IF42 318 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 OR10K2Q6IF99 312 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 MTFR2Q6P444 385 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 DEGS2Q6QHC5 323 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 RTN4RL2Q86UN3 420 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 SERPINA12Q8IW75 414 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 OR52N4Q8NGI2 321 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 LGALS14Q8TCE9 139 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 ACOT12Q8WYK0 555 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 PIGTQ969N2 578 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 SPTSSAQ969W0 71 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 REEP6Q96HR9 211 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 ZNF75AQ96N20 296 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 IFT22Q9H7X7 185 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 C19orf73Q9NVV2 129 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 NLKQ9UBE8 527 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 TUBD1Q9UJT1 453 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 MGAT4AQ9UM21 535 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 PIGLQ9Y2B2 252 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 STARD10Q9Y365 291 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 PRELID3BQ9Y3B1 194 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 TACC2O95359 2948 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 NKX2-6A6NCS4 301 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 ANXA2P2A6NMY6 339 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 FAM90A27PA6NNH2 459 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 ARL6IP5O75915 188 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 SERPINA3P01011 423 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 UBCP0CG48 685 aaKnown RBP6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 CALCBP10092 127 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 ZNF250P15622 560 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 COX5AP20674 150 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 CEACAM8P31997 349 aaPredicted RBP6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 ZNF83P51522 516 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 UBE2NP61088 152 aaKnown RBP6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 EXOSC2Q13868 293 aaKnown RBP6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 TRAM1Q15629 374 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 TMEM255AQ5JRV8 349 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 CLVS2Q5SYC1 327 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 CNIH2Q6PI25 160 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 REC114Q7Z4M0 266 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 OR5AS1Q8N127 324 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 JAGN1Q8N5M9 183 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 SAMD12Q8N8I0 201 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 WDR31Q8NA23 367 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 SLC30A7Q8NEW0 376 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 OR5T2Q8NGG2 359 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 ST8SIA4Q92187 359 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 PHF21AQ96BD5 680 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 POM121L2Q96KW2 1035 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 BBC3Q96PG8 261 aaPredicted RBP6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 PLEKHA1Q9HB21 404 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 GLRX2Q9NS18 164 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 GPR173Q9NS66 373 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 ZNF275Q9NSD4 429 aaPredicted RBP6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 COPZ2Q9P299 210 aa6.66□□□□□ -1.34
AC005840.3-201ENST00000541888 ZNF835Q9Y2P0 537 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms