RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 FARS2O95363 451 aaKnown RBP10.97□□□□□ -0.65
RNF4-222ENST00000541204 HOXB5P09067 269 aa10.97□□□□□ -0.65
RNF4-222ENST00000541204 LIFP15018 202 aa10.97□□□□□ -0.65
RNF4-222ENST00000541204 OR3A2P47893 321 aa10.97□□□□□ -0.65
RNF4-222ENST00000541204 S100A10P60903 97 aa10.97□□□□□ -0.65
RNF4-222ENST00000541204 PJVKQ0ZLH3 352 aa10.97□□□□□ -0.65
RNF4-222ENST00000541204 TRA2AQ13595 282 aaKnown RBP eCLIP10.97□□□□□ -0.65
RNF4-222ENST00000541204 ACTBL2Q562R1 376 aa10.97□□□□□ -0.65
RNF4-222ENST00000541204 DHRS7BQ6IAN0 325 aaPredicted RBP10.97□□□□□ -0.65
RNF4-222ENST00000541204 RAB11FIP2Q7L804 512 aa10.97□□□□□ -0.65
RNF4-222ENST00000541204 PEG10Q86TG7 708 aaKnown RBP10.97□□□□□ -0.65
RNF4-222ENST00000541204 YRDCQ86U90 279 aaKnown RBP10.97□□□□□ -0.65
RNF4-222ENST00000541204 OR51T1Q8NGJ9 327 aa10.97□□□□□ -0.65
RNF4-222ENST00000541204 LOXL2Q9Y4K0 774 aa10.97□□□□□ -0.65
RNF4-222ENST00000541204 ZIC3O60481 467 aa10.97□□□□□ -0.65
RNF4-222ENST00000541204 SNAPINO95295 136 aa10.97□□□□□ -0.65
RNF4-222ENST00000541204 LYL1P12980 280 aa10.97□□□□□ -0.65
RNF4-222ENST00000541204 NFYBP25208 207 aa10.97□□□□□ -0.65
RNF4-222ENST00000541204 SNU13P55769 128 aaKnown RBP10.97□□□□□ -0.65
RNF4-222ENST00000541204 CSNK2A1P68400 391 aaPredicted RBP10.97□□□□□ -0.65
RNF4-222ENST00000541204 SLC35A1P78382 337 aa10.97□□□□□ -0.65
RNF4-222ENST00000541204 PHYHD1Q5SRE7 291 aa10.97□□□□□ -0.65
RNF4-222ENST00000541204 DCAF12Q5T6F0 453 aa10.97□□□□□ -0.65
RNF4-222ENST00000541204 C1QL2Q7Z5L3 287 aa10.97□□□□□ -0.65
RNF4-222ENST00000541204 ZNF283Q8N7M2 679 aa10.97□□□□□ -0.65
RNF4-222ENST00000541204 CSNK2A3Q8NEV1 391 aa10.97□□□□□ -0.65
RNF4-222ENST00000541204 OR6X1Q8NH79 312 aa10.97□□□□□ -0.65
RNF4-222ENST00000541204 AQP10Q96PS8 301 aa10.97□□□□□ -0.65
RNF4-222ENST00000541204 SEC11CQ9BY50 192 aa10.97□□□□□ -0.65
RNF4-222ENST00000541204 SLC5A7Q9GZV3 580 aa10.97□□□□□ -0.65
RNF4-222ENST00000541204 OR10A2Q9H208 303 aa10.97□□□□□ -0.65
RNF4-222ENST00000541204 FANCFQ9NPI8 374 aa10.97□□□□□ -0.65
RNF4-222ENST00000541204 EHFQ9NZC4 300 aa10.97□□□□□ -0.65
RNF4-222ENST00000541204 ARID1AO14497 2285 aa10.97□□□□□ -0.65
RNF4-222ENST00000541204 KNG1P01042 644 aa10.96□□□□□ -0.65
RNF4-222ENST00000541204 CSTBP04080 98 aaKnown RBP10.96□□□□□ -0.65
RNF4-222ENST00000541204 MPLP40238 635 aa10.96□□□□□ -0.65
RNF4-222ENST00000541204 SLC6A9P48067 706 aa10.96□□□□□ -0.65
RNF4-222ENST00000541204 Q0VFX4 171 aa10.96□□□□□ -0.65
RNF4-222ENST00000541204 TIPARPQ7Z3E1 657 aaKnown RBP10.96□□□□□ -0.65
RNF4-222ENST00000541204 GALNTL5Q7Z4T8 443 aa10.96□□□□□ -0.65
RNF4-222ENST00000541204 LHFPL1Q86WI0 220 aa10.96□□□□□ -0.65
RNF4-222ENST00000541204 M1APQ8TC57 530 aa10.96□□□□□ -0.65
RNF4-222ENST00000541204 ADAMTS17Q8TE56 1095 aa10.96□□□□□ -0.65
RNF4-222ENST00000541204 SLC25A43Q8WUT9 341 aaPredicted RBP10.96□□□□□ -0.65
RNF4-222ENST00000541204 LIN37Q96GY3 246 aaPredicted RBP10.96□□□□□ -0.65
RNF4-222ENST00000541204 C2orf50Q96LR7 162 aa10.96□□□□□ -0.65
RNF4-222ENST00000541204 URM1Q9BTM9 101 aaKnown RBP10.96□□□□□ -0.65
RNF4-222ENST00000541204 ANGPTL4Q9BY76 406 aa10.96□□□□□ -0.65
RNF4-222ENST00000541204 RHOFQ9HBH0 211 aa10.96□□□□□ -0.65
RNF4-222ENST00000541204 PNRC2Q9NPJ4 139 aaKnown RBP10.96□□□□□ -0.65
RNF4-222ENST00000541204 PADI1Q9ULC6 663 aa10.96□□□□□ -0.65
RNF4-222ENST00000541204 HDGFL3Q9Y3E1 203 aa10.96□□□□□ -0.65
RNF4-222ENST00000541204 NUDT19A8MXV4 375 aa10.96□□□□□ -0.66
RNF4-222ENST00000541204 SFTPBP07988 381 aa10.96□□□□□ -0.66
RNF4-222ENST00000541204 MUC1P15941 1255 aaPredicted RBP10.96□□□□□ -0.66
RNF4-222ENST00000541204 RCC1P18754 421 aaPredicted RBP10.96□□□□□ -0.66
RNF4-222ENST00000541204 RAB13P51153 203 aa10.96□□□□□ -0.66
RNF4-222ENST00000541204 STK11Q15831 433 aa10.96□□□□□ -0.66
RNF4-222ENST00000541204 RPL7L1Q6DKI1 246 aaKnown RBP10.96□□□□□ -0.66
RNF4-222ENST00000541204 IL34Q6ZMJ4 242 aa10.96□□□□□ -0.66
RNF4-222ENST00000541204 POC1AQ8NBT0 407 aa10.96□□□□□ -0.66
RNF4-222ENST00000541204 RBM24Q9BX46 236 aaKnown RBP10.96□□□□□ -0.66
RNF4-222ENST00000541204 ACKR4Q9NPB9 350 aa10.96□□□□□ -0.66
RNF4-222ENST00000541204 OSGIN2Q9Y236 505 aa10.96□□□□□ -0.66
RNF4-222ENST00000541204 NPIPA2E9PIF3 369 aa10.95□□□□□ -0.66
RNF4-222ENST00000541204 NPIPA3F8WFD2 350 aa10.95□□□□□ -0.66
RNF4-222ENST00000541204 LRP3O75074 770 aa10.95□□□□□ -0.66
RNF4-222ENST00000541204 RPS2P15880 293 aaKnown RBP10.95□□□□□ -0.66
RNF4-222ENST00000541204 MLF1P58340 268 aa10.95□□□□□ -0.66
RNF4-222ENST00000541204 SLC25A47Q6Q0C1 308 aa10.95□□□□□ -0.66
RNF4-222ENST00000541204 SCGB3A2Q96PL1 93 aa10.95□□□□□ -0.66
RNF4-222ENST00000541204 TCFL5Q9UL49 500 aa10.95□□□□□ -0.66
RNF4-222ENST00000541204 ASPMQ8IZT6 3477 aa10.95□□□□□ -0.66
RNF4-222ENST00000541204 KNTC1P50748 2209 aa10.95□□□□□ -0.66
RNF4-222ENST00000541204 A0A0J9YW62 118 aa10.95□□□□□ -0.66
RNF4-222ENST00000541204 ZNF98A6NK75 572 aa10.95□□□□□ -0.66
RNF4-222ENST00000541204 F5H5K5 113 aa10.95□□□□□ -0.66
RNF4-222ENST00000541204 AGPAT2O15120 278 aa10.95□□□□□ -0.66
RNF4-222ENST00000541204 TRAPPC6AO75865 159 aa10.95□□□□□ -0.66
RNF4-222ENST00000541204 SERPINA5P05154 406 aa10.95□□□□□ -0.66
RNF4-222ENST00000541204 ADH6P28332 368 aa10.95□□□□□ -0.66
RNF4-222ENST00000541204 BLVRBP30043 206 aaPredicted RBP10.95□□□□□ -0.66
RNF4-222ENST00000541204 LPAR6P43657 344 aa10.95□□□□□ -0.66
RNF4-222ENST00000541204 DSCR4P56555 118 aaPredicted RBP10.95□□□□□ -0.66
RNF4-222ENST00000541204 KISS1Q15726 138 aa10.95□□□□□ -0.66
RNF4-222ENST00000541204 ZNF528Q3MIS6 628 aa10.95□□□□□ -0.66
RNF4-222ENST00000541204 PPP1R32Q7Z5V6 425 aa10.95□□□□□ -0.66
RNF4-222ENST00000541204 C2CD4CQ8TF44 421 aa10.95□□□□□ -0.66
RNF4-222ENST00000541204 CT55Q8WUE5 264 aa10.95□□□□□ -0.66
RNF4-222ENST00000541204 ZNF837Q96EG3 531 aaPredicted RBP10.95□□□□□ -0.66
RNF4-222ENST00000541204 NRIP2Q9BQI9 281 aa10.95□□□□□ -0.66
RNF4-222ENST00000541204 ESRP2Q9H6T0 727 aaKnown RBP10.95□□□□□ -0.66
RNF4-222ENST00000541204 TAF9BQ9HBM6 251 aa10.95□□□□□ -0.66
RNF4-222ENST00000541204 RCC2Q9P258 522 aaKnown RBP10.95□□□□□ -0.66
RNF4-222ENST00000541204 MED6O75586 246 aa10.94□□□□□ -0.66
RNF4-222ENST00000541204 RFPL3SP0C7P2 107 aa10.94□□□□□ -0.66
RNF4-222ENST00000541204 SERPINA2P20848 420 aa10.94□□□□□ -0.66
RNF4-222ENST00000541204 NME2P22392 152 aa10.94□□□□□ -0.66
RNF4-222ENST00000541204 RFC3P40938 356 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms