RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 Q499Y3 187 aa13.03□□□□□ -0.32
DDB1-218ENST00000540784 LIPKQ5VXJ0 399 aa13.03□□□□□ -0.32
DDB1-218ENST00000540784 HAGHLQ6PII5 290 aaPredicted RBP13.03□□□□□ -0.32
DDB1-218ENST00000540784 ZNF773Q6PK81 442 aa13.03□□□□□ -0.32
DDB1-218ENST00000540784 WDR82Q6UXN9 313 aa13.03□□□□□ -0.32
DDB1-218ENST00000540784 ZNF367Q7RTV3 350 aa13.03□□□□□ -0.32
DDB1-218ENST00000540784 ANGPTL5Q86XS5 388 aa13.03□□□□□ -0.32
DDB1-218ENST00000540784 DNAAF1Q8NEP3 725 aa13.03□□□□□ -0.32
DDB1-218ENST00000540784 OR13C5Q8NGS8 318 aa13.03□□□□□ -0.32
DDB1-218ENST00000540784 LRRC29Q8WV35 223 aa13.03□□□□□ -0.32
DDB1-218ENST00000540784 TMEM106AQ96A25 262 aa13.03□□□□□ -0.32
DDB1-218ENST00000540784 BORCS8Q96FH0 119 aa13.03□□□□□ -0.32
DDB1-218ENST00000540784 NARFLQ9H6Q4 476 aa13.03□□□□□ -0.32
DDB1-218ENST00000540784 METTL17Q9H7H0 456 aaPredicted RBP13.03□□□□□ -0.32
DDB1-218ENST00000540784 DYSFO75923 2080 aa13.02□□□□□ -0.33
DDB1-218ENST00000540784 A0A096LNT2 108 aa13.02□□□□□ -0.33
DDB1-218ENST00000540784 IGKV1-9A0A0C4DH69 117 aa13.02□□□□□ -0.33
DDB1-218ENST00000540784 ZNF879B4DU55 563 aa13.02□□□□□ -0.33
DDB1-218ENST00000540784 FSTL3O95633 263 aa13.02□□□□□ -0.33
DDB1-218ENST00000540784 IGHV2-70P01814 119 aa13.02□□□□□ -0.33
DDB1-218ENST00000540784 HEXAP06865 529 aa13.02□□□□□ -0.33
DDB1-218ENST00000540784 INHBBP09529 407 aa13.02□□□□□ -0.33
DDB1-218ENST00000540784 CPEP16870 476 aa13.02□□□□□ -0.33
DDB1-218ENST00000540784 MDH2P40926 338 aaKnown RBP13.02□□□□□ -0.33
DDB1-218ENST00000540784 MTCP1P56278 107 aa13.02□□□□□ -0.33
DDB1-218ENST00000540784 ZMYND11Q15326 602 aa13.02□□□□□ -0.33
DDB1-218ENST00000540784 ARMCX4Q5H9R4 360 aa13.02□□□□□ -0.33
DDB1-218ENST00000540784 FAM201AQ5SY85 155 aa13.02□□□□□ -0.33
DDB1-218ENST00000540784 DEFB108BQ8NET1 73 aa13.02□□□□□ -0.33
DDB1-218ENST00000540784 OR13C9Q8NGT0 318 aa13.02□□□□□ -0.33
DDB1-218ENST00000540784 OR10Z1Q8NGY1 313 aa13.02□□□□□ -0.33
DDB1-218ENST00000540784 CLDND2Q8NHS1 167 aa13.02□□□□□ -0.33
DDB1-218ENST00000540784 SPSB1Q96BD6 273 aa13.02□□□□□ -0.33
DDB1-218ENST00000540784 COX4I2Q96KJ9 171 aa13.02□□□□□ -0.33
DDB1-218ENST00000540784 GAL3ST1Q99999 423 aa13.02□□□□□ -0.33
DDB1-218ENST00000540784 TMED9Q9BVK6 235 aa13.02□□□□□ -0.33
DDB1-218ENST00000540784 TMEM165Q9HC07 324 aa13.02□□□□□ -0.33
DDB1-218ENST00000540784 PCDHB10Q9UN67 800 aa13.02□□□□□ -0.33
DDB1-218ENST00000540784 CHD3Q12873 2000 aaKnown RBP13.01□□□□□ -0.33
DDB1-218ENST00000540784 A0A1W2PPK0 400 aa13.01□□□□□ -0.33
DDB1-218ENST00000540784 LGALS8O00214 317 aa13.01□□□□□ -0.33
DDB1-218ENST00000540784 MAGEB3O15480 346 aa13.01□□□□□ -0.33
DDB1-218ENST00000540784 SULT1B1O43704 296 aa13.01□□□□□ -0.33
DDB1-218ENST00000540784 TNFAIP8O95379 198 aa13.01□□□□□ -0.33
DDB1-218ENST00000540784 RAB3AP20336 220 aa13.01□□□□□ -0.33
DDB1-218ENST00000540784 AZGP1P25311 298 aaKnown RBP13.01□□□□□ -0.33
DDB1-218ENST00000540784 TGFBR2P37173 567 aa13.01□□□□□ -0.33
DDB1-218ENST00000540784 TRAM1Q15629 374 aa13.01□□□□□ -0.33
DDB1-218ENST00000540784 KCNJ8Q15842 424 aa13.01□□□□□ -0.33
DDB1-218ENST00000540784 TMEM155Q4W5P6 130 aa13.01□□□□□ -0.33
DDB1-218ENST00000540784 ACSM3Q53FZ2 586 aa13.01□□□□□ -0.33
DDB1-218ENST00000540784 SFRP4Q6FHJ7 346 aaPredicted RBP13.01□□□□□ -0.33
DDB1-218ENST00000540784 LHFPL2Q6ZUX7 228 aa13.01□□□□□ -0.33
DDB1-218ENST00000540784 MUC20Q8N307 709 aaPredicted RBP13.01□□□□□ -0.33
DDB1-218ENST00000540784 SPICQ8N5J4 248 aa13.01□□□□□ -0.33
DDB1-218ENST00000540784 GCSAMQ8N6F7 178 aa13.01□□□□□ -0.33
DDB1-218ENST00000540784 AQP3Q92482 292 aa13.01□□□□□ -0.33
DDB1-218ENST00000540784 FCGR1BQ92637 280 aa13.01□□□□□ -0.33
DDB1-218ENST00000540784 THRSPQ92748 146 aa13.01□□□□□ -0.33
DDB1-218ENST00000540784 OPALINQ96PE5 141 aa13.01□□□□□ -0.33
DDB1-218ENST00000540784 OR14A2Q96R54 314 aa13.01□□□□□ -0.33
DDB1-218ENST00000540784 TAS2R4Q9NYW5 299 aa13.01□□□□□ -0.33
DDB1-218ENST00000540784 CKLFQ9UBR5 152 aa13.01□□□□□ -0.33
DDB1-218ENST00000540784 TRAV38-1A0A0B4J264 116 aa13□□□□□ -0.33
DDB1-218ENST00000540784 C3orf80F5H4A9 247 aa13□□□□□ -0.33
DDB1-218ENST00000540784 J3QT63 122 aa13□□□□□ -0.33
DDB1-218ENST00000540784 RHBDL1O75783 438 aa13□□□□□ -0.33
DDB1-218ENST00000540784 HCKP08631 526 aa13□□□□□ -0.33
DDB1-218ENST00000540784 PCMT1P22061 227 aa13□□□□□ -0.33
DDB1-218ENST00000540784 MAPK3P27361 379 aaPredicted RBP13□□□□□ -0.33
DDB1-218ENST00000540784 CD80P33681 288 aa13□□□□□ -0.33
DDB1-218ENST00000540784 LMO4P61968 165 aa13□□□□□ -0.33
DDB1-218ENST00000540784 PPP3R1P63098 170 aa13□□□□□ -0.33
DDB1-218ENST00000540784 UBE2UQ5VVX9 321 aa13□□□□□ -0.33
DDB1-218ENST00000540784 UNQ9370/PRO34162Q6UXP9 181 aa13□□□□□ -0.33
DDB1-218ENST00000540784 CEACAM19Q7Z692 300 aa13□□□□□ -0.33
DDB1-218ENST00000540784 CALHM1Q8IU99 346 aa13□□□□□ -0.33
DDB1-218ENST00000540784 PHC2Q8IXK0 858 aa13□□□□□ -0.33
DDB1-218ENST00000540784 C19orf18Q8NEA5 215 aa13□□□□□ -0.33
DDB1-218ENST00000540784 TSPAN14Q8NG11 270 aa13□□□□□ -0.33
DDB1-218ENST00000540784 TMEM203Q969S6 136 aa13□□□□□ -0.33
DDB1-218ENST00000540784 PKIBQ9C010 78 aa13□□□□□ -0.33
DDB1-218ENST00000540784 POLDIP2Q9Y2S7 368 aa13□□□□□ -0.33
DDB1-218ENST00000540784 VPS13CQ709C8 3753 aa13□□□□□ -0.33
DDB1-218ENST00000540784 IGKV1-27A0A075B6S5 117 aa12.99□□□□□ -0.33
DDB1-218ENST00000540784 A0A087WXM4 84 aa12.99□□□□□ -0.33
DDB1-218ENST00000540784 TRBV5-7A0A0A0MS05 114 aa12.99□□□□□ -0.33
DDB1-218ENST00000540784 OOEPA6NGQ2 149 aa12.99□□□□□ -0.33
DDB1-218ENST00000540784 AKR7A2O43488 359 aa12.99□□□□□ -0.33
DDB1-218ENST00000540784 SYNGR1O43759 233 aa12.99□□□□□ -0.33
DDB1-218ENST00000540784 GPX5O75715 221 aa12.99□□□□□ -0.33
DDB1-218ENST00000540784 ALDOBP05062 364 aa12.99□□□□□ -0.33
DDB1-218ENST00000540784 ACAA1P09110 424 aaPredicted RBP12.99□□□□□ -0.33
DDB1-218ENST00000540784 EGR1P18146 543 aa12.99□□□□□ -0.33
DDB1-218ENST00000540784 GMFBP60983 142 aa12.99□□□□□ -0.33
DDB1-218ENST00000540784 HOXA4Q00056 320 aaPredicted RBP12.99□□□□□ -0.33
DDB1-218ENST00000540784 IL24Q13007 206 aa12.99□□□□□ -0.33
DDB1-218ENST00000540784 MICBQ29980 383 aa12.99□□□□□ -0.33
DDB1-218ENST00000540784 TMEM249Q2WGJ8 235 aa12.99□□□□□ -0.33
DDB1-218ENST00000540784 ZNF404Q494X3 552 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms