RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 CLPTM1LQ96KA5 538 aa11.54□□□□□ -0.56
SNHG1-213ENST00000540725 ZNF556Q9HAH1 456 aa11.54□□□□□ -0.56
SNHG1-213ENST00000540725 MAB21L2Q9Y586 359 aa11.54□□□□□ -0.56
SNHG1-213ENST00000540725 TRBV23-1A0A0A0MS06 115 aa11.53□□□□□ -0.56
SNHG1-213ENST00000540725 A0A0U1RQV5 110 aa11.53□□□□□ -0.56
SNHG1-213ENST00000540725 ACOD1A6NK06 481 aa11.53□□□□□ -0.56
SNHG1-213ENST00000540725 H0YAE9 185 aa11.53□□□□□ -0.56
SNHG1-213ENST00000540725 H3BUX3 64 aa11.53□□□□□ -0.56
SNHG1-213ENST00000540725 T-ENOLP0DO92 83 aa11.53□□□□□ -0.56
SNHG1-213ENST00000540725 GABRA5P31644 462 aa11.53□□□□□ -0.56
SNHG1-213ENST00000540725 HCCSP53701 268 aa11.53□□□□□ -0.56
SNHG1-213ENST00000540725 APOFQ13790 326 aa11.53□□□□□ -0.56
SNHG1-213ENST00000540725 DMRTC1Q5HYR2 192 aa11.53□□□□□ -0.56
SNHG1-213ENST00000540725 HCP5Q6MZN7 132 aa11.53□□□□□ -0.56
SNHG1-213ENST00000540725 KCTD18Q6PI47 426 aaPredicted RBP11.53□□□□□ -0.56
SNHG1-213ENST00000540725 TRPM8Q7Z2W7 1104 aa11.53□□□□□ -0.56
SNHG1-213ENST00000540725 COMMD2Q86X83 199 aa11.53□□□□□ -0.56
SNHG1-213ENST00000540725 C1QL4Q86Z23 238 aa11.53□□□□□ -0.56
SNHG1-213ENST00000540725 HS3ST5Q8IZT8 346 aa11.53□□□□□ -0.56
SNHG1-213ENST00000540725 ZNF671Q8TAW3 534 aa11.53□□□□□ -0.56
SNHG1-213ENST00000540725 CANT1Q8WVQ1 401 aa11.53□□□□□ -0.56
SNHG1-213ENST00000540725 C17orf50Q8WW18 174 aa11.53□□□□□ -0.56
SNHG1-213ENST00000540725 AQP3Q92482 292 aa11.53□□□□□ -0.56
SNHG1-213ENST00000540725 YIPF3Q9GZM5 350 aa11.53□□□□□ -0.56
SNHG1-213ENST00000540725 YY1AP1Q9H869 796 aa11.53□□□□□ -0.56
SNHG1-213ENST00000540725 FAM206AQ9NX38 181 aa11.53□□□□□ -0.56
SNHG1-213ENST00000540725 FBLN5Q9UBX5 448 aa11.53□□□□□ -0.56
SNHG1-213ENST00000540725 SF3B6Q9Y3B4 125 aaKnown RBP11.53□□□□□ -0.56
SNHG1-213ENST00000540725 TMEM269A0A1B0GVZ9 245 aa11.52□□□□□ -0.57
SNHG1-213ENST00000540725 OR5B21A6NL26 309 aa11.52□□□□□ -0.57
SNHG1-213ENST00000540725 PSMD9O00233 223 aa11.52□□□□□ -0.57
SNHG1-213ENST00000540725 ANGPTL7O43827 346 aa11.52□□□□□ -0.57
SNHG1-213ENST00000540725 E2F6O75461 281 aa11.52□□□□□ -0.57
SNHG1-213ENST00000540725 ATP6V1B1P15313 513 aa11.52□□□□□ -0.57
SNHG1-213ENST00000540725 PRKACGP22612 351 aa11.52□□□□□ -0.57
SNHG1-213ENST00000540725 CAPZA1P52907 286 aa11.52□□□□□ -0.57
SNHG1-213ENST00000540725 TMEM236Q5W0B7 351 aa11.52□□□□□ -0.57
SNHG1-213ENST00000540725 HAGHLQ6PII5 290 aaPredicted RBP11.52□□□□□ -0.57
SNHG1-213ENST00000540725 DEGS2Q6QHC5 323 aa11.52□□□□□ -0.57
SNHG1-213ENST00000540725 MOB3CQ70IA8 216 aa11.52□□□□□ -0.57
SNHG1-213ENST00000540725 THAP5Q7Z6K1 395 aa11.52□□□□□ -0.57
SNHG1-213ENST00000540725 OR5A2Q8NGI9 324 aa11.52□□□□□ -0.57
SNHG1-213ENST00000540725 OR51G2Q8NGK0 314 aa11.52□□□□□ -0.57
SNHG1-213ENST00000540725 OR51E1Q8TCB6 317 aa11.52□□□□□ -0.57
SNHG1-213ENST00000540725 ITFG2Q969R8 447 aa11.52□□□□□ -0.57
SNHG1-213ENST00000540725 SDSLQ96GA7 329 aa11.52□□□□□ -0.57
SNHG1-213ENST00000540725 SSX3Q99909 188 aa11.52□□□□□ -0.57
SNHG1-213ENST00000540725 PBOV1Q9GZY1 135 aa11.52□□□□□ -0.57
SNHG1-213ENST00000540725 SLC25A19Q9HC21 320 aa11.52□□□□□ -0.57
SNHG1-213ENST00000540725 GPR84Q9NQS5 396 aa11.52□□□□□ -0.57
SNHG1-213ENST00000540725 C19orf12Q9NSK7 152 aa11.52□□□□□ -0.57
SNHG1-213ENST00000540725 AQP12BA6NM10 295 aa11.51□□□□□ -0.57
SNHG1-213ENST00000540725 PRR32B1ATL7 298 aa11.51□□□□□ -0.57
SNHG1-213ENST00000540725 MRPL3P09001 348 aaKnown RBP11.51□□□□□ -0.57
SNHG1-213ENST00000540725 CSF1P09603 554 aa11.51□□□□□ -0.57
SNHG1-213ENST00000540725 ANXA8P13928 327 aa11.51□□□□□ -0.57
SNHG1-213ENST00000540725 FAHP16930 419 aa11.51□□□□□ -0.57
SNHG1-213ENST00000540725 RIPPLY1Q0D2K3 151 aa11.51□□□□□ -0.57
SNHG1-213ENST00000540725 LY6EQ16553 131 aa11.51□□□□□ -0.57
SNHG1-213ENST00000540725 PLCXD3Q63HM9 321 aa11.51□□□□□ -0.57
SNHG1-213ENST00000540725 ACP7Q6ZNF0 438 aa11.51□□□□□ -0.57
SNHG1-213ENST00000540725 AQP12AQ8IXF9 295 aa11.51□□□□□ -0.57
SNHG1-213ENST00000540725 PPP1R35Q8TAP8 253 aa11.51□□□□□ -0.57
SNHG1-213ENST00000540725 RORBQ92753 470 aa11.51□□□□□ -0.57
SNHG1-213ENST00000540725 AJUBAQ96IF1 538 aa11.51□□□□□ -0.57
SNHG1-213ENST00000540725 TEX12Q9BXU0 123 aa11.51□□□□□ -0.57
SNHG1-213ENST00000540725 MROQ9BYG7 248 aa11.51□□□□□ -0.57
SNHG1-213ENST00000540725 FAM234AQ9H0X4 552 aa11.51□□□□□ -0.57
SNHG1-213ENST00000540725 RASL12Q9NYN1 266 aa11.51□□□□□ -0.57
SNHG1-213ENST00000540725 PIGLQ9Y2B2 252 aa11.51□□□□□ -0.57
SNHG1-213ENST00000540725 SIGLEC9Q9Y336 463 aa11.51□□□□□ -0.57
SNHG1-213ENST00000540725 CCDC182A6NF36 153 aa11.5□□□□□ -0.57
SNHG1-213ENST00000540725 RFPL4AA6NLU0 287 aa11.5□□□□□ -0.57
SNHG1-213ENST00000540725 RFPL4AL1F8VTS6 287 aa11.5□□□□□ -0.57
SNHG1-213ENST00000540725 GSC2O15499 205 aa11.5□□□□□ -0.57
SNHG1-213ENST00000540725 MTRF1O75570 445 aaKnown RBP11.5□□□□□ -0.57
SNHG1-213ENST00000540725 IGLV3-1P01715 115 aa11.5□□□□□ -0.57
SNHG1-213ENST00000540725 HOXB6P17509 224 aaKnown RBP11.5□□□□□ -0.57
SNHG1-213ENST00000540725 EFNB2P52799 333 aa11.5□□□□□ -0.57
SNHG1-213ENST00000540725 ROM1Q03395 351 aa11.5□□□□□ -0.57
SNHG1-213ENST00000540725 HERPUD1Q15011 391 aa11.5□□□□□ -0.57
SNHG1-213ENST00000540725 SNAPC1Q16533 368 aa11.5□□□□□ -0.57
SNHG1-213ENST00000540725 LRRC75BQ2VPJ9 315 aa11.5□□□□□ -0.57
SNHG1-213ENST00000540725 SMIM21Q3B7S5 101 aa11.5□□□□□ -0.57
SNHG1-213ENST00000540725 ZNF829Q3KNS6 432 aaPredicted RBP11.5□□□□□ -0.57
SNHG1-213ENST00000540725 ZBTB37Q5TC79 503 aa11.5□□□□□ -0.57
SNHG1-213ENST00000540725 LCN1P1Q5VSP4 162 aa11.5□□□□□ -0.57
SNHG1-213ENST00000540725 Q6ZTK2 550 aa11.5□□□□□ -0.57
SNHG1-213ENST00000540725 MKXQ8IYA7 352 aa11.5□□□□□ -0.57
SNHG1-213ENST00000540725 ZNF679Q8IYX0 411 aa11.5□□□□□ -0.57
SNHG1-213ENST00000540725 CD177Q8N6Q3 437 aa11.5□□□□□ -0.57
SNHG1-213ENST00000540725 POC1AQ8NBT0 407 aa11.5□□□□□ -0.57
SNHG1-213ENST00000540725 OR4C13Q8NGP0 309 aa11.5□□□□□ -0.57
SNHG1-213ENST00000540725 OR5K1Q8NHB7 308 aa11.5□□□□□ -0.57
SNHG1-213ENST00000540725 ZNF488Q96MN9 340 aa11.5□□□□□ -0.57
SNHG1-213ENST00000540725 OR8B4Q96RC9 309 aa11.5□□□□□ -0.57
SNHG1-213ENST00000540725 TEAD3Q99594 435 aa11.5□□□□□ -0.57
SNHG1-213ENST00000540725 THTPAQ9BU02 230 aa11.5□□□□□ -0.57
SNHG1-213ENST00000540725 TTTY10Q9BZA0 68 aa11.5□□□□□ -0.57
SNHG1-213ENST00000540725 MEGF9Q9H1U4 602 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms