RNA–Protein interactions for RNA: ENST00000540643.5

SFI1-229, Transcript of SFI1 centrin binding protein, human

APPRIS ALT2 TSL 2 BASIC

Gene SFI1, Length 4,226 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFI1-229	ENST00000540643	SCAMP5	Q8TAC9	235 aa		11.64	□□□□□ -0.55
SFI1-229	ENST00000540643	ALKBH3	Q96Q83	286 aa	Predicted RBP	11.64	□□□□□ -0.55
SFI1-229	ENST00000540643	IL21	Q9HBE4	155 aa		11.64	□□□□□ -0.55
SFI1-229	ENST00000540643	SS18L2	Q9UHA2	77 aa		11.64	□□□□□ -0.55
SFI1-229	ENST00000540643	ODAM	A1E959	279 aa		11.64	□□□□□ -0.55
SFI1-229	ENST00000540643		H3BP45	60 aa		11.64	□□□□□ -0.55
SFI1-229	ENST00000540643	IRAK2	O43187	625 aa		11.64	□□□□□ -0.55
SFI1-229	ENST00000540643	HLA-G	P17693	338 aa		11.64	□□□□□ -0.55
SFI1-229	ENST00000540643	HOXA6	P31267	233 aa		11.64	□□□□□ -0.55
SFI1-229	ENST00000540643	PMP22	Q01453	160 aa		11.64	□□□□□ -0.55
SFI1-229	ENST00000540643	CXCL17	Q6UXB2	119 aa		11.64	□□□□□ -0.55
SFI1-229	ENST00000540643	TMEM144	Q7Z5S9	345 aa		11.64	□□□□□ -0.55
SFI1-229	ENST00000540643	DNASE2B	Q8WZ79	361 aa		11.64	□□□□□ -0.55
SFI1-229	ENST00000540643	LMF2	Q9BU23	707 aa	Known RBP	11.64	□□□□□ -0.55
SFI1-229	ENST00000540643	ANGPTL4	Q9BY76	406 aa		11.64	□□□□□ -0.55
SFI1-229	ENST00000540643	ACTR3C	Q9C0K3	210 aa	Predicted RBP	11.64	□□□□□ -0.55
SFI1-229	ENST00000540643	MANSC4	A6NHS7	340 aa	Predicted RBP	11.64	□□□□□ -0.55
SFI1-229	ENST00000540643	CDC14B	O60729	498 aa		11.64	□□□□□ -0.55
SFI1-229	ENST00000540643	CA1	P00915	261 aa	Predicted RBP	11.64	□□□□□ -0.55
SFI1-229	ENST00000540643	ZNF43	P17038	809 aa		11.64	□□□□□ -0.55
SFI1-229	ENST00000540643	OTX1	P32242	354 aa	Predicted RBP	11.64	□□□□□ -0.55
SFI1-229	ENST00000540643	BTC	P35070	178 aa		11.64	□□□□□ -0.55
SFI1-229	ENST00000540643	TCTA	P57738	103 aa		11.64	□□□□□ -0.55
SFI1-229	ENST00000540643	LINC00696	Q6ZRV3	163 aa		11.64	□□□□□ -0.55
SFI1-229	ENST00000540643	D2HGDH	Q8N465	521 aa		11.64	□□□□□ -0.55
SFI1-229	ENST00000540643	CPT1C	Q8TCG5	803 aa		11.64	□□□□□ -0.55
SFI1-229	ENST00000540643	ADGRL4	Q9HBW9	690 aa		11.64	□□□□□ -0.55
SFI1-229	ENST00000540643	LSM7	Q9UK45	103 aa	Known RBP	11.64	□□□□□ -0.55
SFI1-229	ENST00000540643	RBFOX2	O43251	390 aa	Known RBP eCLIP	11.63	□□□□□ -0.55	7e-7	■■■□□ 15.2
SFI1-229	ENST00000540643	PNMT	P11086	282 aa		11.63	□□□□□ -0.55
SFI1-229	ENST00000540643	LIM2	P55344	173 aa		11.63	□□□□□ -0.55
SFI1-229	ENST00000540643	ZNF770	Q6IQ21	691 aa	Predicted RBP	11.63	□□□□□ -0.55
SFI1-229	ENST00000540643	TOP6BL	Q8N6T0	577 aa		11.63	□□□□□ -0.55
SFI1-229	ENST00000540643	TMEM229B	Q8NBD8	167 aa		11.63	□□□□□ -0.55
SFI1-229	ENST00000540643	OR52E1	Q8NGJ3	308 aa		11.63	□□□□□ -0.55
SFI1-229	ENST00000540643	PCED1B	Q96HM7	432 aa		11.63	□□□□□ -0.55
SFI1-229	ENST00000540643	ZNF286A	Q9HBT8	521 aa		11.63	□□□□□ -0.55
SFI1-229	ENST00000540643	PLEKHJ1	Q9NW61	149 aa		11.63	□□□□□ -0.55
SFI1-229	ENST00000540643	MSC	O60682	206 aa		11.63	□□□□□ -0.55
SFI1-229	ENST00000540643	CTXN2	P0C2S0	81 aa		11.63	□□□□□ -0.55
SFI1-229	ENST00000540643	PWWP2B	Q6NUJ5	590 aa		11.63	□□□□□ -0.55
SFI1-229	ENST00000540643	SMIM20	Q8N5G0	67 aa		11.63	□□□□□ -0.55
SFI1-229	ENST00000540643	SLAMF6	Q96DU3	332 aa		11.63	□□□□□ -0.55
SFI1-229	ENST00000540643	OR4C12	Q96R67	309 aa		11.63	□□□□□ -0.55
SFI1-229	ENST00000540643	IGFLR1	Q9H665	355 aa		11.63	□□□□□ -0.55
SFI1-229	ENST00000540643	SRD5A3	Q9H8P0	318 aa		11.63	□□□□□ -0.55
SFI1-229	ENST00000540643	NAT8	Q9UHE5	227 aa		11.63	□□□□□ -0.55
SFI1-229	ENST00000540643	NSG1	A0A0A6YYJ2	146 aa		11.63	□□□□□ -0.55
SFI1-229	ENST00000540643	CCL25	O15444	150 aa		11.63	□□□□□ -0.55
SFI1-229	ENST00000540643	SSSCA1	O60232	199 aa		11.63	□□□□□ -0.55
SFI1-229	ENST00000540643	TIMP2	P16035	220 aa		11.63	□□□□□ -0.55
SFI1-229	ENST00000540643	ZNF17	P17021	662 aa		11.63	□□□□□ -0.55
SFI1-229	ENST00000540643	GLB1L	Q6UWU2	654 aa		11.63	□□□□□ -0.55
SFI1-229	ENST00000540643	FA2H	Q7L5A8	372 aa		11.63	□□□□□ -0.55
SFI1-229	ENST00000540643	ADGRE4P	Q86SQ3	457 aa		11.63	□□□□□ -0.55
SFI1-229	ENST00000540643	RSPO3	Q9BXY4	272 aa	Predicted RBP	11.63	□□□□□ -0.55
SFI1-229	ENST00000540643	SLC2A8	Q9NY64	477 aa		11.63	□□□□□ -0.55
SFI1-229	ENST00000540643	APOBEC3B	Q9UH17	382 aa	Known RBP	11.63	□□□□□ -0.55
SFI1-229	ENST00000540643	PLCE1	Q9P212	2302 aa		11.63	□□□□□ -0.55
SFI1-229	ENST00000540643	NPIPB8	E9PQR5	432 aa		11.62	□□□□□ -0.55
SFI1-229	ENST00000540643	CLDN7	O95471	211 aa		11.62	□□□□□ -0.55
SFI1-229	ENST00000540643	PRR35	P0CG20	571 aa		11.62	□□□□□ -0.55
SFI1-229	ENST00000540643	CD1B	P29016	333 aa		11.62	□□□□□ -0.55
SFI1-229	ENST00000540643	TAS2R46	P59540	309 aa		11.62	□□□□□ -0.55
SFI1-229	ENST00000540643	PAX2	Q02962	417 aa		11.62	□□□□□ -0.55
SFI1-229	ENST00000540643	CTSL3P	Q5NE16	218 aa		11.62	□□□□□ -0.55
SFI1-229	ENST00000540643	SLC2A12	Q8TD20	617 aa		11.62	□□□□□ -0.55
SFI1-229	ENST00000540643	GPR20	Q99678	358 aa		11.62	□□□□□ -0.55
SFI1-229	ENST00000540643	HHLA2	Q9UM44	414 aa		11.62	□□□□□ -0.55
SFI1-229	ENST00000540643	ALOX12B	O75342	701 aa		11.62	□□□□□ -0.55
SFI1-229	ENST00000540643	TNFSF13	O75888	250 aa		11.62	□□□□□ -0.55
SFI1-229	ENST00000540643	CD5	P06127	495 aa		11.62	□□□□□ -0.55
SFI1-229	ENST00000540643	TMEM225B	P0DP42	221 aa		11.62	□□□□□ -0.55
SFI1-229	ENST00000540643	HIST1H1C	P16403	213 aa	Known RBP	11.62	□□□□□ -0.55
SFI1-229	ENST00000540643	DRD1	P21728	446 aa		11.62	□□□□□ -0.55
SFI1-229	ENST00000540643	OPRD1	P41143	372 aa		11.62	□□□□□ -0.55
SFI1-229	ENST00000540643	EMP1	P54849	157 aa		11.62	□□□□□ -0.55
SFI1-229	ENST00000540643	P2RY6	Q15077	328 aa		11.62	□□□□□ -0.55
SFI1-229	ENST00000540643	SP6	Q3SY56	376 aa		11.62	□□□□□ -0.55
SFI1-229	ENST00000540643	TMEM255B	Q8WV15	326 aa		11.62	□□□□□ -0.55
SFI1-229	ENST00000540643	MBD3L1	Q8WWY6	194 aa		11.62	□□□□□ -0.55
SFI1-229	ENST00000540643	ELOVL3	Q9HB03	270 aa		11.62	□□□□□ -0.55
SFI1-229	ENST00000540643	TECR	Q9NZ01	308 aa	Known RBP	11.62	□□□□□ -0.55
SFI1-229	ENST00000540643	RBPJL	Q9UBG7	517 aa		11.62	□□□□□ -0.55
SFI1-229	ENST00000540643	FCF1	Q9Y324	198 aa	Known RBP	11.62	□□□□□ -0.55
SFI1-229	ENST00000540643	COL11A2	P13942	1736 aa	Predicted RBP	11.62	□□□□□ -0.55
SFI1-229	ENST00000540643	SHISA3	A0PJX4	238 aa		11.62	□□□□□ -0.55
SFI1-229	ENST00000540643	CD300LB	A8K4G0	201 aa		11.62	□□□□□ -0.55
SFI1-229	ENST00000540643	TFPI	P10646	304 aa		11.62	□□□□□ -0.55
SFI1-229	ENST00000540643	CTXN1	P60606	82 aa		11.62	□□□□□ -0.55
SFI1-229	ENST00000540643		Q6ZVH6	145 aa		11.62	□□□□□ -0.55
SFI1-229	ENST00000540643	C1QL4	Q86Z23	238 aa		11.62	□□□□□ -0.55
SFI1-229	ENST00000540643	NUP43	Q8NFH3	380 aa		11.62	□□□□□ -0.55
SFI1-229	ENST00000540643	PTPMT1	Q8WUK0	201 aa	Predicted RBP	11.62	□□□□□ -0.55
SFI1-229	ENST00000540643	RSG1	Q9BU20	258 aa		11.62	□□□□□ -0.55
SFI1-229	ENST00000540643	RAB18	Q9NP72	206 aa		11.62	□□□□□ -0.55
SFI1-229	ENST00000540643	MANBAL	Q9NQG1	85 aa		11.62	□□□□□ -0.55
SFI1-229	ENST00000540643	LRIT1	Q9P2V4	623 aa		11.62	□□□□□ -0.55
SFI1-229	ENST00000540643	TRAV26-1	A0A087WT03	109 aa		11.62	□□□□□ -0.55
SFI1-229	ENST00000540643	IFITM10	A6NMD0	228 aa		11.62	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms