RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 ZNF732B4DXR9 585 aa9.76□□□□□ -0.85
CBX3P4-202ENST00000540428 PRR23D1E9PI22 279 aaPredicted RBP9.76□□□□□ -0.85
CBX3P4-202ENST00000540428 H3BN98 237 aa9.76□□□□□ -0.85
CBX3P4-202ENST00000540428 MTRF1O75570 445 aaKnown RBP9.76□□□□□ -0.85
CBX3P4-202ENST00000540428 RHBDL1O75783 438 aa9.76□□□□□ -0.85
CBX3P4-202ENST00000540428 TFF1P04155 84 aa9.76□□□□□ -0.85
CBX3P4-202ENST00000540428 PRR23D2P0DMB1 279 aaPredicted RBP9.76□□□□□ -0.85
CBX3P4-202ENST00000540428 MNAT1P51948 309 aa9.76□□□□□ -0.85
CBX3P4-202ENST00000540428 LY6EQ16553 131 aa9.76□□□□□ -0.85
CBX3P4-202ENST00000540428 SLC35D3Q5M8T2 416 aa9.76□□□□□ -0.85
CBX3P4-202ENST00000540428 ZBTB37Q5TC79 503 aa9.76□□□□□ -0.85
CBX3P4-202ENST00000540428 THAP5Q7Z6K1 395 aa9.76□□□□□ -0.85
CBX3P4-202ENST00000540428 DHFR2Q86XF0 187 aa9.76□□□□□ -0.85
CBX3P4-202ENST00000540428 IQCF1Q8N6M8 205 aa9.76□□□□□ -0.85
CBX3P4-202ENST00000540428 FAM81AQ8TBF8 368 aa9.76□□□□□ -0.85
CBX3P4-202ENST00000540428 AQP3Q92482 292 aa9.76□□□□□ -0.85
CBX3P4-202ENST00000540428 FEVQ99581 238 aa9.76□□□□□ -0.85
CBX3P4-202ENST00000540428 CDCA4Q9BXL8 241 aa9.76□□□□□ -0.85
CBX3P4-202ENST00000540428 ELL3Q9HB65 397 aaPredicted RBP9.76□□□□□ -0.85
CBX3P4-202ENST00000540428 C19orf12Q9NSK7 152 aa9.76□□□□□ -0.85
CBX3P4-202ENST00000540428 FOXJ3Q9UPW0 622 aa9.76□□□□□ -0.85
CBX3P4-202ENST00000540428 SIGLEC9Q9Y336 463 aa9.76□□□□□ -0.85
CBX3P4-202ENST00000540428 TET2Q6N021 2002 aaPredicted RBP9.76□□□□□ -0.85
CBX3P4-202ENST00000540428 hCG_1809904A0A1W2PP81 198 aa9.75□□□□□ -0.85
CBX3P4-202ENST00000540428 A0A1W2PPE2 198 aa9.75□□□□□ -0.85
CBX3P4-202ENST00000540428 A0A1W2PR64 198 aa9.75□□□□□ -0.85
CBX3P4-202ENST00000540428 A0A1W2PRV1 198 aa9.75□□□□□ -0.85
CBX3P4-202ENST00000540428 VGLL3A8MV65 326 aa9.75□□□□□ -0.85
CBX3P4-202ENST00000540428 SELENOFO60613 162 aa9.75□□□□□ -0.85
CBX3P4-202ENST00000540428 DCTN3O75935 186 aa9.75□□□□□ -0.85
CBX3P4-202ENST00000540428 HMGN1P05114 100 aa9.75□□□□□ -0.85
CBX3P4-202ENST00000540428 ALOX5APP20292 161 aa9.75□□□□□ -0.85
CBX3P4-202ENST00000540428 PLBD1Q6P4A8 553 aa9.75□□□□□ -0.85
CBX3P4-202ENST00000540428 HAGHLQ6PII5 290 aaPredicted RBP9.75□□□□□ -0.85
CBX3P4-202ENST00000540428 DEGS2Q6QHC5 323 aa9.75□□□□□ -0.85
CBX3P4-202ENST00000540428 TRPM8Q7Z2W7 1104 aa9.75□□□□□ -0.85
CBX3P4-202ENST00000540428 MKXQ8IYA7 352 aa9.75□□□□□ -0.85
CBX3P4-202ENST00000540428 C11orf42Q8N5U0 333 aa9.75□□□□□ -0.85
CBX3P4-202ENST00000540428 POC1AQ8NBT0 407 aa9.75□□□□□ -0.85
CBX3P4-202ENST00000540428 GIPC3Q8TF64 312 aa9.75□□□□□ -0.85
CBX3P4-202ENST00000540428 RORBQ92753 470 aa9.75□□□□□ -0.85
CBX3P4-202ENST00000540428 USE1Q9NZ43 259 aa9.75□□□□□ -0.85
CBX3P4-202ENST00000540428 ARL2BPQ9Y2Y0 163 aa9.75□□□□□ -0.85
CBX3P4-202ENST00000540428 SLC1A7O00341 560 aa9.74□□□□□ -0.85
CBX3P4-202ENST00000540428 XPNPEP2O43895 674 aa9.74□□□□□ -0.85
CBX3P4-202ENST00000540428 IGLV3-1P01715 115 aa9.74□□□□□ -0.85
CBX3P4-202ENST00000540428 RAP2AP10114 183 aa9.74□□□□□ -0.85
CBX3P4-202ENST00000540428 CAPZA1P52907 286 aa9.74□□□□□ -0.85
CBX3P4-202ENST00000540428 LGALS4P56470 323 aa9.74□□□□□ -0.85
CBX3P4-202ENST00000540428 RPL31P62899 125 aaKnown RBP9.74□□□□□ -0.85
CBX3P4-202ENST00000540428 RIPPLY1Q0D2K3 151 aa9.74□□□□□ -0.85
CBX3P4-202ENST00000540428 TRIM25Q14258 630 aaKnown RBP9.74□□□□□ -0.85
CBX3P4-202ENST00000540428 FAM189A2Q15884 450 aa9.74□□□□□ -0.85
CBX3P4-202ENST00000540428 SMIM21Q3B7S5 101 aa9.74□□□□□ -0.85
CBX3P4-202ENST00000540428 CEP78Q5JTW2 689 aa9.74□□□□□ -0.85
CBX3P4-202ENST00000540428 LCN1P1Q5VSP4 162 aa9.74□□□□□ -0.85
CBX3P4-202ENST00000540428 KCTD18Q6PI47 426 aaPredicted RBP9.74□□□□□ -0.85
CBX3P4-202ENST00000540428 ACP7Q6ZNF0 438 aa9.74□□□□□ -0.85
CBX3P4-202ENST00000540428 Q6ZPA2 131 aa9.74□□□□□ -0.85
CBX3P4-202ENST00000540428 KRT77Q7Z794 578 aa9.74□□□□□ -0.85
CBX3P4-202ENST00000540428 CALHM1Q8IU99 346 aa9.74□□□□□ -0.85
CBX3P4-202ENST00000540428 ZNF561Q8N587 486 aa9.74□□□□□ -0.85
CBX3P4-202ENST00000540428 PIFOQ8TCI5 191 aa9.74□□□□□ -0.85
CBX3P4-202ENST00000540428 YIPF3Q9GZM5 350 aa9.74□□□□□ -0.85
CBX3P4-202ENST00000540428 YY1AP1Q9H869 796 aa9.74□□□□□ -0.85
CBX3P4-202ENST00000540428 FAM206AQ9NX38 181 aa9.74□□□□□ -0.85
CBX3P4-202ENST00000540428 LAMP5Q9UJQ1 280 aa9.74□□□□□ -0.85
CBX3P4-202ENST00000540428 KLHDC2Q9Y2U9 406 aa9.74□□□□□ -0.85
CBX3P4-202ENST00000540428 TMEM269A0A1B0GVZ9 245 aa9.73□□□□□ -0.85
CBX3P4-202ENST00000540428 MEGF11A6BM72 1044 aa9.73□□□□□ -0.85
CBX3P4-202ENST00000540428 FAM90A8PA6NJQ4 464 aa9.73□□□□□ -0.85
CBX3P4-202ENST00000540428 RFPL4AA6NLU0 287 aa9.73□□□□□ -0.85
CBX3P4-202ENST00000540428 RFPL4AL1F8VTS6 287 aa9.73□□□□□ -0.85
CBX3P4-202ENST00000540428 PIN1P1O15428 100 aa9.73□□□□□ -0.85
CBX3P4-202ENST00000540428 GSC2O15499 205 aa9.73□□□□□ -0.85
CBX3P4-202ENST00000540428 CHST1O43916 411 aa9.73□□□□□ -0.85
CBX3P4-202ENST00000540428 NOS1APO75052 506 aaPredicted RBP9.73□□□□□ -0.85
CBX3P4-202ENST00000540428 PGA5P0DJD9 388 aa9.73□□□□□ -0.85
CBX3P4-202ENST00000540428 VSIG10L2P0DP72 767 aa9.73□□□□□ -0.85
CBX3P4-202ENST00000540428 SLC2A5P22732 501 aa9.73□□□□□ -0.85
CBX3P4-202ENST00000540428 ERVFRD-1P60508 538 aa9.73□□□□□ -0.85
CBX3P4-202ENST00000540428 CDK5Q00535 292 aa9.73□□□□□ -0.85
CBX3P4-202ENST00000540428 EMX1Q04741 257 aaPredicted RBP9.73□□□□□ -0.85
CBX3P4-202ENST00000540428 GINS1Q14691 196 aa9.73□□□□□ -0.85
CBX3P4-202ENST00000540428 TMEM200BQ69YZ2 307 aa9.73□□□□□ -0.85
CBX3P4-202ENST00000540428 MOB3CQ70IA8 216 aa9.73□□□□□ -0.85
CBX3P4-202ENST00000540428 ZNF573Q86YE8 665 aa9.73□□□□□ -0.85
CBX3P4-202ENST00000540428 CPOQ8IVL8 374 aa9.73□□□□□ -0.85
CBX3P4-202ENST00000540428 Q8N2B8 174 aa9.73□□□□□ -0.85
CBX3P4-202ENST00000540428 C11orf44Q8N8P7 122 aa9.73□□□□□ -0.85
CBX3P4-202ENST00000540428 OR4S1Q8NGB4 309 aa9.73□□□□□ -0.85
CBX3P4-202ENST00000540428 MROQ9BYG7 248 aa9.73□□□□□ -0.85
CBX3P4-202ENST00000540428 PBOV1Q9GZY1 135 aa9.73□□□□□ -0.85
CBX3P4-202ENST00000540428 ENPP5Q9UJA9 477 aa9.73□□□□□ -0.85
CBX3P4-202ENST00000540428 POLDIP2Q9Y2S7 368 aa9.73□□□□□ -0.85
CBX3P4-202ENST00000540428 TBL2Q9Y4P3 447 aaKnown RBP9.73□□□□□ -0.85
CBX3P4-202ENST00000540428 B2RBV5 119 aa9.72□□□□□ -0.85
CBX3P4-202ENST00000540428 J3QT63 122 aa9.72□□□□□ -0.85
CBX3P4-202ENST00000540428 ATP8B1O43520 1251 aa9.72□□□□□ -0.85
CBX3P4-202ENST00000540428 FBXO24O75426 580 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms