RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 OR5B21A6NL26 309 aa12.49□□□□□ -0.41
UBE3B-212ENST00000540230 SYT7O43581 403 aa12.49□□□□□ -0.41
UBE3B-212ENST00000540230 NDUFA2O43678 99 aa12.49□□□□□ -0.41
UBE3B-212ENST00000540230 SYNGR1O43759 233 aa12.49□□□□□ -0.41
UBE3B-212ENST00000540230 MPZL2O60487 215 aa12.49□□□□□ -0.41
UBE3B-212ENST00000540230 IGHV4-38-2P0DP08 117 aa12.49□□□□□ -0.41
UBE3B-212ENST00000540230 NPY4RP50391 375 aa12.49□□□□□ -0.41
UBE3B-212ENST00000540230 ARMCX4Q5H9R4 360 aa12.49□□□□□ -0.41
UBE3B-212ENST00000540230 BTNL3Q6UXE8 466 aa12.49□□□□□ -0.41
UBE3B-212ENST00000540230 OR52I1Q8NGK6 324 aa12.49□□□□□ -0.41
UBE3B-212ENST00000540230 TMEM158Q8WZ71 300 aa12.49□□□□□ -0.41
UBE3B-212ENST00000540230 ITFG2Q969R8 447 aa12.49□□□□□ -0.41
UBE3B-212ENST00000540230 PELI1Q96FA3 418 aa12.49□□□□□ -0.41
UBE3B-212ENST00000540230 ZNF488Q96MN9 340 aa12.49□□□□□ -0.41
UBE3B-212ENST00000540230 ISG20L2Q9H9L3 353 aaKnown RBP12.49□□□□□ -0.41
UBE3B-212ENST00000540230 SOX21Q9Y651 276 aaPredicted RBP12.49□□□□□ -0.41
UBE3B-212ENST00000540230 PQLC2LA1A4F0 135 aa12.48□□□□□ -0.41
UBE3B-212ENST00000540230 SNTNA6NMZ2 147 aa12.48□□□□□ -0.41
UBE3B-212ENST00000540230 DHRS7CA6NNS2 312 aa12.48□□□□□ -0.41
UBE3B-212ENST00000540230 J3QLW9 94 aa12.48□□□□□ -0.41
UBE3B-212ENST00000540230 IGHA1P01876 353 aa12.48□□□□□ -0.41
UBE3B-212ENST00000540230 ZNF19P17023 458 aa12.48□□□□□ -0.41
UBE3B-212ENST00000540230 GLRA1P23415 457 aa12.48□□□□□ -0.41
UBE3B-212ENST00000540230 UBE2V2Q15819 145 aa12.48□□□□□ -0.41
UBE3B-212ENST00000540230 ZNF691Q5VV52 312 aa12.48□□□□□ -0.41
UBE3B-212ENST00000540230 BCL6BQ8N143 479 aaPredicted RBP12.48□□□□□ -0.41
UBE3B-212ENST00000540230 BATF2Q8N1L9 274 aa12.48□□□□□ -0.41
UBE3B-212ENST00000540230 TEX29Q8N6K0 151 aa12.48□□□□□ -0.41
UBE3B-212ENST00000540230 ZNF555Q8NEP9 628 aa12.48□□□□□ -0.41
UBE3B-212ENST00000540230 OR10AC1Q8NH08 325 aa12.48□□□□□ -0.41
UBE3B-212ENST00000540230 CNIH3Q8TBE1 160 aa12.48□□□□□ -0.41
UBE3B-212ENST00000540230 TRMT10AQ8TBZ6 339 aaKnown RBP12.48□□□□□ -0.41
UBE3B-212ENST00000540230 NPRL2Q8WTW4 380 aa12.48□□□□□ -0.41
UBE3B-212ENST00000540230 ST8SIA4Q92187 359 aa12.48□□□□□ -0.41
UBE3B-212ENST00000540230 ALG8Q9BVK2 526 aa12.48□□□□□ -0.41
UBE3B-212ENST00000540230 DNAJB11Q9UBS4 358 aa12.48□□□□□ -0.41
UBE3B-212ENST00000540230 ZNF69Q9UC07 566 aa12.48□□□□□ -0.41
UBE3B-212ENST00000540230 ANK2Q01484 3957 aa12.48□□□□□ -0.41
UBE3B-212ENST00000540230 TRAV40A0A0B4J280 105 aa12.47□□□□□ -0.41
UBE3B-212ENST00000540230 ANKRD61A6NGH8 418 aa12.47□□□□□ -0.41
UBE3B-212ENST00000540230 ENSAO43768 121 aaKnown RBP12.47□□□□□ -0.41
UBE3B-212ENST00000540230 UBCP0CG48 685 aaKnown RBP12.47□□□□□ -0.41
UBE3B-212ENST00000540230 HAAOP46952 286 aa12.47□□□□□ -0.41
UBE3B-212ENST00000540230 FGF12P61328 243 aa12.47□□□□□ -0.41
UBE3B-212ENST00000540230 IKZF1Q13422 519 aa12.47□□□□□ -0.41
UBE3B-212ENST00000540230 GALEQ14376 348 aa12.47□□□□□ -0.41
UBE3B-212ENST00000540230 FDX2Q6P4F2 183 aa12.47□□□□□ -0.41
UBE3B-212ENST00000540230 BTN2A1Q7KYR7 527 aa12.47□□□□□ -0.41
UBE3B-212ENST00000540230 CALHM1Q8IU99 346 aa12.47□□□□□ -0.41
UBE3B-212ENST00000540230 ANGPTL6Q8NI99 470 aa12.47□□□□□ -0.41
UBE3B-212ENST00000540230 CYGBQ8WWM9 190 aa12.47□□□□□ -0.41
UBE3B-212ENST00000540230 UPRTQ96BW1 309 aa12.47□□□□□ -0.41
UBE3B-212ENST00000540230 C12orf43Q96C57 262 aaKnown RBP12.47□□□□□ -0.41
UBE3B-212ENST00000540230 ADAT3Q96EY9 351 aaPredicted RBP12.47□□□□□ -0.41
UBE3B-212ENST00000540230 Q96MT0 163 aa12.47□□□□□ -0.41
UBE3B-212ENST00000540230 GAFA1Q96PS6 74 aa12.47□□□□□ -0.41
UBE3B-212ENST00000540230 C19orf24Q9BVV8 132 aa12.47□□□□□ -0.41
UBE3B-212ENST00000540230 PLEKHA1Q9HB21 404 aa12.47□□□□□ -0.41
UBE3B-212ENST00000540230 MRPS18AQ9NVS2 196 aaKnown RBP12.47□□□□□ -0.41
UBE3B-212ENST00000540230 ERVK13-1Q9NX77 482 aa12.47□□□□□ -0.41
UBE3B-212ENST00000540230 NLKQ9UBE8 527 aa12.47□□□□□ -0.41
UBE3B-212ENST00000540230 NUP50Q9UKX7 468 aa12.47□□□□□ -0.41
UBE3B-212ENST00000540230 PCDHGB1Q9Y5G3 927 aa12.47□□□□□ -0.41
UBE3B-212ENST00000540230 IGKV1D-17A0A075B6S4 117 aa12.47□□□□□ -0.41
UBE3B-212ENST00000540230 IGKV1-27A0A075B6S5 117 aa12.47□□□□□ -0.41
UBE3B-212ENST00000540230 E9PI62 339 aa12.47□□□□□ -0.41
UBE3B-212ENST00000540230 CASQ2O14958 399 aaPredicted RBP12.47□□□□□ -0.41
UBE3B-212ENST00000540230 SFTPBP07988 381 aa12.47□□□□□ -0.41
UBE3B-212ENST00000540230 HTR1AP08908 422 aa12.47□□□□□ -0.41
UBE3B-212ENST00000540230 TGM4P49221 684 aa12.47□□□□□ -0.41
UBE3B-212ENST00000540230 ADARB1P78563 741 aaKnown RBP12.47□□□□□ -0.41
UBE3B-212ENST00000540230 RAB40BQ12829 278 aa12.47□□□□□ -0.41
UBE3B-212ENST00000540230 DGUOKQ16854 277 aa12.47□□□□□ -0.41
UBE3B-212ENST00000540230 TUSC1Q2TAM9 212 aa12.47□□□□□ -0.41
UBE3B-212ENST00000540230 ATPAF1Q5TC12 328 aaPredicted RBP12.47□□□□□ -0.41
UBE3B-212ENST00000540230 OGFRL1Q5TC84 451 aaPredicted RBP12.47□□□□□ -0.41
UBE3B-212ENST00000540230 ZNF788Q6ZQV5 615 aa12.47□□□□□ -0.41
UBE3B-212ENST00000540230 KCTD20Q7Z5Y7 419 aa12.47□□□□□ -0.41
UBE3B-212ENST00000540230 ANGPTL5Q86XS5 388 aa12.47□□□□□ -0.41
UBE3B-212ENST00000540230 OR51A4Q8NGJ6 313 aa12.47□□□□□ -0.41
UBE3B-212ENST00000540230 CHST5Q9GZS9 411 aa12.47□□□□□ -0.41
UBE3B-212ENST00000540230 ESM1Q9NQ30 184 aa12.47□□□□□ -0.41
UBE3B-212ENST00000540230 NKX1-2Q9UD57 310 aaPredicted RBP12.47□□□□□ -0.41
UBE3B-212ENST00000540230 ZNF222Q9UK12 451 aa12.47□□□□□ -0.41
UBE3B-212ENST00000540230 OR4C45A6NMZ5 311 aa12.46□□□□□ -0.42
UBE3B-212ENST00000540230 OR2AT4A6NND4 320 aa12.46□□□□□ -0.42
UBE3B-212ENST00000540230 J3QT63 122 aa12.46□□□□□ -0.42
UBE3B-212ENST00000540230 FADS2O95864 444 aaKnown RBP12.46□□□□□ -0.42
UBE3B-212ENST00000540230 PSG2P11465 335 aa12.46□□□□□ -0.42
UBE3B-212ENST00000540230 MMP9P14780 707 aa12.46□□□□□ -0.42
UBE3B-212ENST00000540230 HILS1P60008 231 aa12.46□□□□□ -0.42
UBE3B-212ENST00000540230 ACTA2P62736 377 aa12.46□□□□□ -0.42
UBE3B-212ENST00000540230 ACTG2P63267 376 aa12.46□□□□□ -0.42
UBE3B-212ENST00000540230 SLC36A1Q7Z2H8 476 aa12.46□□□□□ -0.42
UBE3B-212ENST00000540230 BPIFB2Q8N4F0 458 aa12.46□□□□□ -0.42
UBE3B-212ENST00000540230 PACRGLQ8N7B6 248 aa12.46□□□□□ -0.42
UBE3B-212ENST00000540230 POC1AQ8NBT0 407 aa12.46□□□□□ -0.42
UBE3B-212ENST00000540230 ZNF418Q8TF45 676 aaPredicted RBP12.46□□□□□ -0.42
UBE3B-212ENST00000540230 ZNF48Q96MX3 618 aaPredicted RBP12.46□□□□□ -0.42
UBE3B-212ENST00000540230 ADI1Q9BV57 179 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms