RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 C5orf47Q569G3 176 aa11.17□□□□□ -0.62
DDX55-206ENST00000539934 TMEM64Q6YI46 380 aa11.17□□□□□ -0.62
DDX55-206ENST00000539934 TMPPEQ6ZT21 453 aa11.17□□□□□ -0.62
DDX55-206ENST00000539934 HIST2H3AQ71DI3 136 aa11.17□□□□□ -0.62
DDX55-206ENST00000539934 LINC00346Q8IVM7 164 aa11.17□□□□□ -0.62
DDX55-206ENST00000539934 CMTM1Q8IZ96 169 aa11.17□□□□□ -0.62
DDX55-206ENST00000539934 ZBTB34Q8NCN2 500 aa11.17□□□□□ -0.62
DDX55-206ENST00000539934 SUN3Q8TAQ9 357 aa11.17□□□□□ -0.62
DDX55-206ENST00000539934 CCDC74AQ96AQ1 378 aa11.17□□□□□ -0.62
DDX55-206ENST00000539934 KTI12Q96EK9 354 aaPredicted RBP11.17□□□□□ -0.62
DDX55-206ENST00000539934 SMIM10Q96HG1 83 aa11.17□□□□□ -0.62
DDX55-206ENST00000539934 SLC25A31Q9H0C2 315 aa11.17□□□□□ -0.62
DDX55-206ENST00000539934 OR51I1Q9H343 314 aa11.17□□□□□ -0.62
DDX55-206ENST00000539934 NOX3Q9HBY0 568 aa11.17□□□□□ -0.62
DDX55-206ENST00000539934 MMP26Q9NRE1 261 aa11.17□□□□□ -0.62
DDX55-206ENST00000539934 P2RX2Q9UBL9 471 aa11.17□□□□□ -0.62
DDX55-206ENST00000539934 COL5A1P20908 1838 aaPredicted RBP11.17□□□□□ -0.62
DDX55-206ENST00000539934 A0A1W2PS29 197 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 ZNF860A6NHJ4 632 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 CD37P11049 281 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 LIM2P55344 173 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 CKS1BP61024 79 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 SNRPNP63162 240 aaKnown RBP11.16□□□□□ -0.62
DDX55-206ENST00000539934 RHOGP84095 191 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 FABP5Q01469 135 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 PAX5Q02548 391 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 AESQ08117 197 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 TMEM177Q53S58 311 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 OR4A47Q6IF82 309 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 CSNK1A1LQ8N752 337 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 SLC35G3Q8N808 338 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 NHLRC2Q8NBF2 726 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 OR4K5Q8NGD3 323 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 OR5D16Q8NGK9 328 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 SFXN5Q8TD22 340 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 GEMIN6Q8WXD5 167 aaKnown RBP11.16□□□□□ -0.62
DDX55-206ENST00000539934 MOAP1Q96BY2 351 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 IL4I1Q96RQ9 567 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 SSBP4Q9BWG4 385 aaPredicted RBP11.16□□□□□ -0.62
DDX55-206ENST00000539934 TAPBPLQ9BX59 468 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 GABARAPL1Q9H0R8 117 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 DAPP1Q9UN19 280 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 FAM96BQ9Y3D0 163 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 CDHR4A6H8M9 788 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 OR6C76A6NM76 312 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 KLK10O43240 276 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 HIST1H2BKO60814 126 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 SCGB2A1O75556 95 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 HIST1H2BJP06899 126 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 ST6GAL1P15907 406 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 HIST1H2BOP23527 126 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 SSTR4P31391 388 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 HIST1H2BBP33778 126 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 FASLGP48023 281 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 SUMO3P55854 103 aaPredicted RBP11.16□□□□□ -0.62
DDX55-206ENST00000539934 HIST1H2BDP58876 126 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 HIST1H2BCP62807 126 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 RAB1AP62820 205 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 HIST2H2BEQ16778 126 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 PGGHGQ32M88 737 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.16□□□□□ -0.62
DDX55-206ENST00000539934 CCDC144NLQ6NUI1 221 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 ZNF613Q6PF04 617 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 ZNF546Q86UE3 836 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 OR56A1Q8NGH5 318 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 OR13C9Q8NGT0 318 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 GPR148Q8TDV2 347 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 HIST1H2BHQ93079 126 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 C16orf58Q96GQ5 468 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 YPEL4Q96NS1 127 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 EPYCQ99645 322 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 HIST1H2BNQ99877 126 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 HIST1H2BMQ99879 126 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 MIEN1Q9BRT3 115 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 RPS10P5Q9NQ39 176 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 THSD1Q9NS62 852 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 PSORS1C1Q9UIG5 152 aa11.16□□□□□ -0.62
DDX55-206ENST00000539934 AQP7P3A6NL99 342 aa11.15□□□□□ -0.62
DDX55-206ENST00000539934 M0R036 132 aa11.15□□□□□ -0.62
DDX55-206ENST00000539934 FAAHO00519 579 aa11.15□□□□□ -0.62
DDX55-206ENST00000539934 HMGN2P05204 90 aaKnown RBP11.15□□□□□ -0.62
DDX55-206ENST00000539934 PPOXP50336 477 aa11.15□□□□□ -0.62
DDX55-206ENST00000539934 NXPH1P58417 271 aa11.15□□□□□ -0.62
DDX55-206ENST00000539934 AKR1C1Q04828 323 aa11.15□□□□□ -0.62
DDX55-206ENST00000539934 MAPK14Q16539 360 aa11.15□□□□□ -0.62
DDX55-206ENST00000539934 DEFB110Q30KQ9 67 aa11.15□□□□□ -0.62
DDX55-206ENST00000539934 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.15□□□□□ -0.62
DDX55-206ENST00000539934 TEX38Q6PEX7 206 aa11.15□□□□□ -0.62
DDX55-206ENST00000539934 ZNF705AQ6ZN79 300 aaPredicted RBP11.15□□□□□ -0.62
DDX55-206ENST00000539934 OR2W3Q7Z3T1 314 aa11.15□□□□□ -0.62
DDX55-206ENST00000539934 OR2Z1Q8NG97 314 aa11.15□□□□□ -0.62
DDX55-206ENST00000539934 OR56B4Q8NH76 319 aa11.15□□□□□ -0.62
DDX55-206ENST00000539934 SLC25A28Q96A46 364 aa11.15□□□□□ -0.62
DDX55-206ENST00000539934 ZNF681Q96N22 645 aa11.15□□□□□ -0.62
DDX55-206ENST00000539934 ZNF607Q96SK3 696 aa11.15□□□□□ -0.62
DDX55-206ENST00000539934 C20orf144Q9BQM9 153 aa11.15□□□□□ -0.62
DDX55-206ENST00000539934 SPRTNQ9H040 489 aaPredicted RBP11.15□□□□□ -0.62
DDX55-206ENST00000539934 GPN1Q9HCN4 374 aaPredicted RBP11.15□□□□□ -0.62
DDX55-206ENST00000539934 TMEFF2Q9UIK5 374 aaPredicted RBP11.15□□□□□ -0.62
DDX55-206ENST00000539934 KPTNQ9Y664 436 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms