RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 CANT1Q8WVQ1 401 aa12.56□□□□□ -0.4
UBE3B-211ENST00000539843 PPP1R3EQ9H7J1 279 aa12.56□□□□□ -0.4
UBE3B-211ENST00000539843 MOB1AQ9H8S9 216 aa12.56□□□□□ -0.4
UBE3B-211ENST00000539843 SLC25A19Q9HC21 320 aa12.56□□□□□ -0.4
UBE3B-211ENST00000539843 H2AFY2Q9P0M6 372 aaPredicted RBP12.56□□□□□ -0.4
UBE3B-211ENST00000539843 DNAJB9Q9UBS3 223 aa12.56□□□□□ -0.4
UBE3B-211ENST00000539843 IKZF2Q9UKS7 526 aa12.56□□□□□ -0.4
UBE3B-211ENST00000539843 GTF2A1LQ9UNN4 478 aa12.56□□□□□ -0.4
UBE3B-211ENST00000539843 POLDIP2Q9Y2S7 368 aa12.56□□□□□ -0.4
UBE3B-211ENST00000539843 RNASEK-C17orf49H0YIS7 233 aa12.55□□□□□ -0.4
UBE3B-211ENST00000539843 FCN3O75636 299 aa12.55□□□□□ -0.4
UBE3B-211ENST00000539843 ELF3P78545 371 aaPredicted RBP12.55□□□□□ -0.4
UBE3B-211ENST00000539843 CBX1P83916 185 aa12.55□□□□□ -0.4
UBE3B-211ENST00000539843 CDK5Q00535 292 aa12.55□□□□□ -0.4
UBE3B-211ENST00000539843 C11orf88Q6PI97 169 aa12.55□□□□□ -0.4
UBE3B-211ENST00000539843 MOB3CQ70IA8 216 aa12.55□□□□□ -0.4
UBE3B-211ENST00000539843 HPSE2Q8WWQ2 592 aa12.55□□□□□ -0.4
UBE3B-211ENST00000539843 DUS3LQ96G46 650 aaKnown RBP12.55□□□□□ -0.4
UBE3B-211ENST00000539843 CLPTM1LQ96KA5 538 aa12.55□□□□□ -0.4
UBE3B-211ENST00000539843 LYZL4Q96KX0 146 aa12.55□□□□□ -0.4
UBE3B-211ENST00000539843 CNN2Q99439 309 aaKnown RBP12.55□□□□□ -0.4
UBE3B-211ENST00000539843 RBM4BQ9BQ04 359 aaKnown RBP12.55□□□□□ -0.4
UBE3B-211ENST00000539843 PBOV1Q9GZY1 135 aa12.55□□□□□ -0.4
UBE3B-211ENST00000539843 C16orf95Q9H693 158 aa12.55□□□□□ -0.4
UBE3B-211ENST00000539843 PAPOLBQ9NRJ5 636 aaKnown RBP12.55□□□□□ -0.4
UBE3B-211ENST00000539843 TAS2R1Q9NYW7 299 aa12.55□□□□□ -0.4
UBE3B-211ENST00000539843 TVP23BQ9NYZ1 205 aa12.55□□□□□ -0.4
UBE3B-211ENST00000539843 PIGLQ9Y2B2 252 aa12.55□□□□□ -0.4
UBE3B-211ENST00000539843 SLC22A31A6NKX4 558 aa12.54□□□□□ -0.4
UBE3B-211ENST00000539843 GYG2O15488 501 aa12.54□□□□□ -0.4
UBE3B-211ENST00000539843 ANGPTL7O43827 346 aa12.54□□□□□ -0.4
UBE3B-211ENST00000539843 DHRS3O75911 302 aa12.54□□□□□ -0.4
UBE3B-211ENST00000539843 MRPL3P09001 348 aaKnown RBP12.54□□□□□ -0.4
UBE3B-211ENST00000539843 SELLP14151 372 aa12.54□□□□□ -0.4
UBE3B-211ENST00000539843 GABRA5P31644 462 aa12.54□□□□□ -0.4
UBE3B-211ENST00000539843 PROK1P58294 105 aa12.54□□□□□ -0.4
UBE3B-211ENST00000539843 ESRRGP62508 458 aa12.54□□□□□ -0.4
UBE3B-211ENST00000539843 KLRD1Q13241 179 aa12.54□□□□□ -0.4
UBE3B-211ENST00000539843 HAGHLQ6PII5 290 aaPredicted RBP12.54□□□□□ -0.4
UBE3B-211ENST00000539843 Q6ZSV7 163 aa12.54□□□□□ -0.4
UBE3B-211ENST00000539843 Q6ZTK2 550 aa12.54□□□□□ -0.4
UBE3B-211ENST00000539843 ZNF573Q86YE8 665 aa12.54□□□□□ -0.4
UBE3B-211ENST00000539843 ZNF679Q8IYX0 411 aa12.54□□□□□ -0.4
UBE3B-211ENST00000539843 Q8N7P7 452 aa12.54□□□□□ -0.4
UBE3B-211ENST00000539843 MNTQ99583 582 aa12.54□□□□□ -0.4
UBE3B-211ENST00000539843 SEMA6AQ9H2E6 1030 aa12.54□□□□□ -0.4
UBE3B-211ENST00000539843 OR51I2Q9H344 312 aa12.54□□□□□ -0.4
UBE3B-211ENST00000539843 HEXA-AS1Q9H8Q6 139 aa12.54□□□□□ -0.4
UBE3B-211ENST00000539843 GPR84Q9NQS5 396 aa12.54□□□□□ -0.4
UBE3B-211ENST00000539843 KLHDC2Q9Y2U9 406 aa12.54□□□□□ -0.4
UBE3B-211ENST00000539843 MEGF8Q7Z7M0 2845 aa12.53□□□□□ -0.4
UBE3B-211ENST00000539843 FKBP6O75344 327 aa12.53□□□□□ -0.4
UBE3B-211ENST00000539843 TSPAN9O75954 239 aa12.53□□□□□ -0.4
UBE3B-211ENST00000539843 NRASP01111 189 aa12.53□□□□□ -0.4
UBE3B-211ENST00000539843 PSG2P11465 335 aa12.53□□□□□ -0.4
UBE3B-211ENST00000539843 AMY2BP19961 511 aa12.53□□□□□ -0.4
UBE3B-211ENST00000539843 LGALS4P56470 323 aa12.53□□□□□ -0.4
UBE3B-211ENST00000539843 ZNF561Q8N587 486 aa12.53□□□□□ -0.4
UBE3B-211ENST00000539843 ZNRF1Q8ND25 227 aa12.53□□□□□ -0.4
UBE3B-211ENST00000539843 BEND2Q8NDZ0 799 aa12.53□□□□□ -0.4
UBE3B-211ENST00000539843 BBS1Q8NFJ9 593 aa12.53□□□□□ -0.4
UBE3B-211ENST00000539843 OR4C13Q8NGP0 309 aa12.53□□□□□ -0.4
UBE3B-211ENST00000539843 OR51E1Q8TCB6 317 aa12.53□□□□□ -0.4
UBE3B-211ENST00000539843 AQP3Q92482 292 aa12.53□□□□□ -0.4
UBE3B-211ENST00000539843 NRBF2Q96F24 287 aa12.53□□□□□ -0.4
UBE3B-211ENST00000539843 OR8B4Q96RC9 309 aa12.53□□□□□ -0.4
UBE3B-211ENST00000539843 TEAD3Q99594 435 aa12.53□□□□□ -0.4
UBE3B-211ENST00000539843 PPA2Q9H2U2 334 aa12.53□□□□□ -0.4
UBE3B-211ENST00000539843 FAM206AQ9NX38 181 aa12.53□□□□□ -0.4
UBE3B-211ENST00000539843 NUFIP1Q9UHK0 495 aaKnown RBP12.53□□□□□ -0.4
UBE3B-211ENST00000539843 ENOPH1Q9UHY7 261 aa12.53□□□□□ -0.4
UBE3B-211ENST00000539843 LOC110117498-PIK3R3F6TDL0 507 aa12.52□□□□□ -0.41
UBE3B-211ENST00000539843 PSMD9O00233 223 aa12.52□□□□□ -0.41
UBE3B-211ENST00000539843 RHBDL1O75783 438 aa12.52□□□□□ -0.41
UBE3B-211ENST00000539843 NXPH2O95156 264 aa12.52□□□□□ -0.41
UBE3B-211ENST00000539843 FAHP16930 419 aa12.52□□□□□ -0.41
UBE3B-211ENST00000539843 PRKACGP22612 351 aa12.52□□□□□ -0.41
UBE3B-211ENST00000539843 SLC2A5P22732 501 aa12.52□□□□□ -0.41
UBE3B-211ENST00000539843 HAAOP46952 286 aa12.52□□□□□ -0.41
UBE3B-211ENST00000539843 CRISP1P54107 249 aa12.52□□□□□ -0.41
UBE3B-211ENST00000539843 ROM1Q03395 351 aa12.52□□□□□ -0.41
UBE3B-211ENST00000539843 PRB3Q04118 309 aaPredicted RBP12.52□□□□□ -0.41
UBE3B-211ENST00000539843 EGR3Q06889 387 aa12.52□□□□□ -0.41
UBE3B-211ENST00000539843 CLVS2Q5SYC1 327 aa12.52□□□□□ -0.41
UBE3B-211ENST00000539843 BCL2L15Q5TBC7 163 aa12.52□□□□□ -0.41
UBE3B-211ENST00000539843 TMEM236Q5W0B7 351 aa12.52□□□□□ -0.41
UBE3B-211ENST00000539843 ASPHD2Q6ICH7 369 aa12.52□□□□□ -0.41
UBE3B-211ENST00000539843 LIAT1Q6ZQX7 453 aa12.52□□□□□ -0.41
UBE3B-211ENST00000539843 TRPM8Q7Z2W7 1104 aa12.52□□□□□ -0.41
UBE3B-211ENST00000539843 TMEM179BQ7Z7N9 219 aa12.52□□□□□ -0.41
UBE3B-211ENST00000539843 TNFRSF14Q92956 283 aa12.52□□□□□ -0.41
UBE3B-211ENST00000539843 SDSLQ96GA7 329 aa12.52□□□□□ -0.41
UBE3B-211ENST00000539843 PLEKHA1Q9HB21 404 aa12.52□□□□□ -0.41
UBE3B-211ENST00000539843 IGKV1D-17A0A075B6S4 117 aa12.51□□□□□ -0.41
UBE3B-211ENST00000539843 ZNF670-ZNF695F2Z2N8 137 aa12.51□□□□□ -0.41
UBE3B-211ENST00000539843 H3BUX3 64 aa12.51□□□□□ -0.41
UBE3B-211ENST00000539843 J3QT63 122 aa12.51□□□□□ -0.41
UBE3B-211ENST00000539843 CSF1P09603 554 aa12.51□□□□□ -0.41
UBE3B-211ENST00000539843 T-ENOLP0DO92 83 aa12.51□□□□□ -0.41
UBE3B-211ENST00000539843 RPL31P62899 125 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms