RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 SLC36A1Q7Z2H8 476 aa8.83□□□□□ -1
SPARC-209ENST00000539687 C1orf174Q8IYL3 243 aa8.83□□□□□ -1
SPARC-209ENST00000539687 OR6K3Q8NGY3 331 aa8.83□□□□□ -1
SPARC-209ENST00000539687 OR4K15Q8NH41 348 aa8.83□□□□□ -1
SPARC-209ENST00000539687 BOD1Q96IK1 185 aa8.83□□□□□ -1
SPARC-209ENST00000539687 HIST1H2AAQ96QV6 131 aa8.83□□□□□ -1
SPARC-209ENST00000539687 REPIN1Q9BWE0 567 aaKnown RBP8.83□□□□□ -1
SPARC-209ENST00000539687 BEX2Q9BXY8 128 aa8.83□□□□□ -1
SPARC-209ENST00000539687 CHST6Q9GZX3 395 aa8.83□□□□□ -1
SPARC-209ENST00000539687 RHOFQ9HBH0 211 aa8.83□□□□□ -1
SPARC-209ENST00000539687 OBP2BQ9NPH6 170 aa8.83□□□□□ -1
SPARC-209ENST00000539687 TUBG2Q9NRH3 451 aa8.83□□□□□ -1
SPARC-209ENST00000539687 MYEF2Q9P2K5 600 aaKnown RBP8.83□□□□□ -1
SPARC-209ENST00000539687 MGAT4CQ9UBM8 478 aa8.83□□□□□ -1
SPARC-209ENST00000539687 MPC1Q9Y5U8 109 aa8.83□□□□□ -1
SPARC-209ENST00000539687 KCNMB2Q9Y691 235 aa8.83□□□□□ -1
SPARC-209ENST00000539687 USP24Q9UPU5 2620 aa8.83□□□□□ -1
SPARC-209ENST00000539687 A0A096LPE4 126 aa8.82□□□□□ -1
SPARC-209ENST00000539687 FAM230AA0A1W2PPH8 454 aa8.82□□□□□ -1
SPARC-209ENST00000539687 A0A1W2PPZ6 126 aa8.82□□□□□ -1
SPARC-209ENST00000539687 C5orf49A4QMS7 147 aa8.82□□□□□ -1
SPARC-209ENST00000539687 MEIS3P1A6NDR6 274 aa8.82□□□□□ -1
SPARC-209ENST00000539687 ANKRD30BLA7E2S9 258 aa8.82□□□□□ -1
SPARC-209ENST00000539687 FOXI3A8MTJ6 420 aaPredicted RBP8.82□□□□□ -1
SPARC-209ENST00000539687 FABP7O15540 132 aa8.82□□□□□ -1
SPARC-209ENST00000539687 HLA-HP01893 362 aa8.82□□□□□ -1
SPARC-209ENST00000539687 CRHP06850 196 aa8.82□□□□□ -1
SPARC-209ENST00000539687 TPOP07202 933 aa8.82□□□□□ -1
SPARC-209ENST00000539687 PATE4P0C8F1 98 aa8.82□□□□□ -1
SPARC-209ENST00000539687 ZNF735P0CB33 412 aa8.82□□□□□ -1
SPARC-209ENST00000539687 EDN3P14138 238 aa8.82□□□□□ -1
SPARC-209ENST00000539687 ANXA7P20073 488 aaKnown RBP8.82□□□□□ -1
SPARC-209ENST00000539687 DNASE1P24855 282 aa8.82□□□□□ -1
SPARC-209ENST00000539687 ACKR3P25106 362 aa8.82□□□□□ -1
SPARC-209ENST00000539687 BLVRBP30043 206 aaPredicted RBP8.82□□□□□ -1
SPARC-209ENST00000539687 RAD52P43351 418 aa8.82□□□□□ -1
SPARC-209ENST00000539687 NKX2-5P52952 324 aaPredicted RBP8.82□□□□□ -1
SPARC-209ENST00000539687 CXADRP78310 365 aa8.82□□□□□ -1
SPARC-209ENST00000539687 ZNF92Q03936 586 aa8.82□□□□□ -1
SPARC-209ENST00000539687 HGFACQ04756 655 aa8.82□□□□□ -1
SPARC-209ENST00000539687 SURF2Q15527 256 aaPredicted RBP8.82□□□□□ -1
SPARC-209ENST00000539687 NSUN5P2Q63ZY6 315 aa8.82□□□□□ -1
SPARC-209ENST00000539687 LIN54Q6MZP7 749 aa8.82□□□□□ -1
SPARC-209ENST00000539687 FAAP20Q6NZ36 180 aa8.82□□□□□ -1
SPARC-209ENST00000539687 INO80CQ6PI98 192 aaPredicted RBP8.82□□□□□ -1
SPARC-209ENST00000539687 MOB3CQ70IA8 216 aa8.82□□□□□ -1
SPARC-209ENST00000539687 ZNF767PQ75MW2 155 aa8.82□□□□□ -1
SPARC-209ENST00000539687 FAM214BQ7L5A3 538 aa8.82□□□□□ -1
SPARC-209ENST00000539687 HOGA1Q86XE5 327 aa8.82□□□□□ -1
SPARC-209ENST00000539687 ZDHHC23Q8IYP9 409 aa8.82□□□□□ -1
SPARC-209ENST00000539687 C17orf78Q8N4C9 275 aa8.82□□□□□ -1
SPARC-209ENST00000539687 TMEM104Q8NE00 496 aa8.82□□□□□ -1
SPARC-209ENST00000539687 CPEB3Q8NE35 698 aaKnown RBP8.82□□□□□ -1
SPARC-209ENST00000539687 OR5H2Q8NGV7 314 aa8.82□□□□□ -1
SPARC-209ENST00000539687 OR2AE1Q8NHA4 323 aa8.82□□□□□ -1
SPARC-209ENST00000539687 SNIP1Q8TAD8 396 aaKnown RBP8.82□□□□□ -1
SPARC-209ENST00000539687 BCL2L2Q92843 193 aaPredicted RBP8.82□□□□□ -1
SPARC-209ENST00000539687 POM121L2Q96KW2 1035 aa8.82□□□□□ -1
SPARC-209ENST00000539687 Q96M66 194 aa8.82□□□□□ -1
SPARC-209ENST00000539687 SPACA5Q96QH8 159 aa8.82□□□□□ -1
SPARC-209ENST00000539687 PLK3Q9H4B4 646 aa8.82□□□□□ -1
SPARC-209ENST00000539687 BANF2Q9H503 90 aa8.82□□□□□ -1
SPARC-209ENST00000539687 ZMAT3Q9HA38 289 aaKnown RBP8.82□□□□□ -1
SPARC-209ENST00000539687 B3GNT2Q9NY97 397 aa8.82□□□□□ -1
SPARC-209ENST00000539687 FLVCR2Q9UPI3 526 aa8.82□□□□□ -1
SPARC-209ENST00000539687 CHD6Q8TD26 2715 aa8.82□□□□□ -1
SPARC-209ENST00000539687 OR5B21A6NL26 309 aa8.81□□□□□ -1
SPARC-209ENST00000539687 SOCS1O15524 211 aa8.81□□□□□ -1
SPARC-209ENST00000539687 HTR3BO95264 441 aa8.81□□□□□ -1
SPARC-209ENST00000539687 HPXP02790 462 aa8.81□□□□□ -1
SPARC-209ENST00000539687 SELEP16581 610 aa8.81□□□□□ -1
SPARC-209ENST00000539687 AMY2BP19961 511 aa8.81□□□□□ -1
SPARC-209ENST00000539687 DTYMKP23919 212 aa8.81□□□□□ -1
SPARC-209ENST00000539687 OR3A3P47888 321 aa8.81□□□□□ -1
SPARC-209ENST00000539687 FGL1Q08830 312 aa8.81□□□□□ -1
SPARC-209ENST00000539687 PDZK1IP1Q13113 114 aa8.81□□□□□ -1
SPARC-209ENST00000539687 GRK1Q15835 563 aa8.81□□□□□ -1
SPARC-209ENST00000539687 C3AR1Q16581 482 aa8.81□□□□□ -1
SPARC-209ENST00000539687 CEACAM21Q3KPI0 293 aa8.81□□□□□ -1
SPARC-209ENST00000539687 SCGB2B2Q4G0G5 96 aa8.81□□□□□ -1
SPARC-209ENST00000539687 RNFT1Q5M7Z0 435 aa8.81□□□□□ -1
SPARC-209ENST00000539687 SEZ6L2Q6UXD5 910 aa8.81□□□□□ -1
SPARC-209ENST00000539687 TFAP2EQ6VUC0 442 aa8.81□□□□□ -1
SPARC-209ENST00000539687 C3P1Q6ZMU1 363 aa8.81□□□□□ -1
SPARC-209ENST00000539687 Q6ZT83 130 aa8.81□□□□□ -1
SPARC-209ENST00000539687 LINC00596Q86U02 117 aa8.81□□□□□ -1
SPARC-209ENST00000539687 TMEM200AQ86VY9 491 aa8.81□□□□□ -1
SPARC-209ENST00000539687 MKXQ8IYA7 352 aa8.81□□□□□ -1
SPARC-209ENST00000539687 OSR2Q8N2R0 312 aa8.81□□□□□ -1
SPARC-209ENST00000539687 BEST4Q8NFU0 473 aa8.81□□□□□ -1
SPARC-209ENST00000539687 OR2AK2Q8NG84 335 aa8.81□□□□□ -1
SPARC-209ENST00000539687 OR4D10Q8NGI6 311 aa8.81□□□□□ -1
SPARC-209ENST00000539687 OR5A2Q8NGI9 324 aa8.81□□□□□ -1
SPARC-209ENST00000539687 OR5D18Q8NGL1 313 aa8.81□□□□□ -1
SPARC-209ENST00000539687 FGFBP3Q8TAT2 258 aa8.81□□□□□ -1
SPARC-209ENST00000539687 NPRL2Q8WTW4 380 aa8.81□□□□□ -1
SPARC-209ENST00000539687 NUDCD2Q8WVJ2 157 aa8.81□□□□□ -1
SPARC-209ENST00000539687 ST8SIA4Q92187 359 aa8.81□□□□□ -1
SPARC-209ENST00000539687 PIGCQ92535 297 aa8.81□□□□□ -1
SPARC-209ENST00000539687 DVL3Q92997 716 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms