RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 SSC4DQ8WTU2 575 aa13.17□□□□□ -0.3
VAMP1-207ENST00000539047 HPSE2Q8WWQ2 592 aa13.17□□□□□ -0.3
VAMP1-207ENST00000539047 DVL3Q92997 716 aaPredicted RBP13.17□□□□□ -0.3
VAMP1-207ENST00000539047 PTX4Q96A99 478 aa13.17□□□□□ -0.3
VAMP1-207ENST00000539047 S100A16Q96FQ6 103 aaKnown RBP13.17□□□□□ -0.3
VAMP1-207ENST00000539047 MRPL37Q9BZE1 423 aaKnown RBP13.17□□□□□ -0.3
VAMP1-207ENST00000539047 METTL9Q9H1A3 318 aa13.17□□□□□ -0.3
VAMP1-207ENST00000539047 RHBDL2Q9NX52 303 aa13.17□□□□□ -0.3
VAMP1-207ENST00000539047 CRIM1Q9NZV1 1036 aa13.17□□□□□ -0.3
VAMP1-207ENST00000539047 OR5V1Q9UGF6 321 aa13.17□□□□□ -0.3
VAMP1-207ENST00000539047 POLDIP2Q9Y2S7 368 aa13.17□□□□□ -0.3
VAMP1-207ENST00000539047 LRP5LA4QPB2 252 aa13.16□□□□□ -0.3
VAMP1-207ENST00000539047 METTL21EPA6NDL7 271 aa13.16□□□□□ -0.3
VAMP1-207ENST00000539047 SHISA9B4DS77 424 aa13.16□□□□□ -0.3
VAMP1-207ENST00000539047 LILRA1O75019 489 aa13.16□□□□□ -0.3
VAMP1-207ENST00000539047 OR4A8P0C604 315 aa13.16□□□□□ -0.3
VAMP1-207ENST00000539047 RAB6AP20340 208 aa13.16□□□□□ -0.3
VAMP1-207ENST00000539047 TNFSF8P32971 234 aa13.16□□□□□ -0.3
VAMP1-207ENST00000539047 HAAOP46952 286 aa13.16□□□□□ -0.3
VAMP1-207ENST00000539047 EVX1P49640 407 aa13.16□□□□□ -0.3
VAMP1-207ENST00000539047 C2orf76Q3KRA6 126 aa13.16□□□□□ -0.3
VAMP1-207ENST00000539047 DMRTC1Q5HYR2 192 aa13.16□□□□□ -0.3
VAMP1-207ENST00000539047 CNIH2Q6PI25 160 aa13.16□□□□□ -0.3
VAMP1-207ENST00000539047 METAP1DQ6UB28 335 aaPredicted RBP13.16□□□□□ -0.3
VAMP1-207ENST00000539047 FAM131AQ6UXB0 335 aa13.16□□□□□ -0.3
VAMP1-207ENST00000539047 MEX3BQ6ZN04 569 aaKnown RBP13.16□□□□□ -0.3
VAMP1-207ENST00000539047 DMRTC2Q8IXT2 367 aaPredicted RBP13.16□□□□□ -0.3
VAMP1-207ENST00000539047 SAXO1Q8IYX7 474 aa13.16□□□□□ -0.3
VAMP1-207ENST00000539047 FBXL14Q8N1E6 418 aa13.16□□□□□ -0.3
VAMP1-207ENST00000539047 ZNF611Q8N823 705 aa13.16□□□□□ -0.3
VAMP1-207ENST00000539047 OR2Z1Q8NG97 314 aa13.16□□□□□ -0.3
VAMP1-207ENST00000539047 OR10AD1Q8NGE0 317 aa13.16□□□□□ -0.3
VAMP1-207ENST00000539047 DIRC2Q96SL1 478 aa13.16□□□□□ -0.3
VAMP1-207ENST00000539047 URM1Q9BTM9 101 aaKnown RBP13.16□□□□□ -0.3
VAMP1-207ENST00000539047 DYNLRB1Q9NP97 96 aa13.16□□□□□ -0.3
VAMP1-207ENST00000539047 DIABLOQ9NR28 239 aa13.16□□□□□ -0.3
VAMP1-207ENST00000539047 FAIMQ9NVQ4 179 aa13.16□□□□□ -0.3
VAMP1-207ENST00000539047 EXTL2Q9UBQ6 330 aa13.16□□□□□ -0.3
VAMP1-207ENST00000539047 FBXO9Q9UK97 447 aaPredicted RBP13.16□□□□□ -0.3
VAMP1-207ENST00000539047 RAB22AQ9UL26 194 aa13.16□□□□□ -0.3
VAMP1-207ENST00000539047 ZDHHC8Q9ULC8 765 aa13.16□□□□□ -0.3
VAMP1-207ENST00000539047 TMEM272A0A1B0GTI8 110 aa13.15□□□□□ -0.3
VAMP1-207ENST00000539047 FABP12A6NFH5 140 aa13.15□□□□□ -0.3
VAMP1-207ENST00000539047 J3QT63 122 aa13.15□□□□□ -0.3
VAMP1-207ENST00000539047 CRTAPO75718 401 aaPredicted RBP13.15□□□□□ -0.3
VAMP1-207ENST00000539047 APOBEC3AP31941 199 aaPredicted RBP13.15□□□□□ -0.3
VAMP1-207ENST00000539047 SERPINF1P36955 418 aa13.15□□□□□ -0.3
VAMP1-207ENST00000539047 ALDH3B1P43353 468 aa13.15□□□□□ -0.3
VAMP1-207ENST00000539047 SRP9P49458 86 aaKnown RBP13.15□□□□□ -0.3
VAMP1-207ENST00000539047 ZNF81P51508 661 aa13.15□□□□□ -0.3
VAMP1-207ENST00000539047 MMP15P51511 669 aa13.15□□□□□ -0.3
VAMP1-207ENST00000539047 PDZK1IP1Q13113 114 aa13.15□□□□□ -0.3
VAMP1-207ENST00000539047 ADIPOQQ15848 244 aa13.15□□□□□ -0.3
VAMP1-207ENST00000539047 ALKBH6Q3KRA9 238 aa13.15□□□□□ -0.3
VAMP1-207ENST00000539047 SLC22A6Q4U2R8 563 aa13.15□□□□□ -0.3
VAMP1-207ENST00000539047 LYPD6Q86Y78 171 aa13.15□□□□□ -0.3
VAMP1-207ENST00000539047 PXT1Q8NFP0 134 aa13.15□□□□□ -0.3
VAMP1-207ENST00000539047 OR5H6Q8NGV6 325 aa13.15□□□□□ -0.3
VAMP1-207ENST00000539047 C15orf40Q8WUR7 153 aa13.15□□□□□ -0.3
VAMP1-207ENST00000539047 FAM46BQ96A09 425 aa13.15□□□□□ -0.3
VAMP1-207ENST00000539047 SLC25A28Q96A46 364 aa13.15□□□□□ -0.3
VAMP1-207ENST00000539047 ELMOD3Q96FG2 381 aa13.15□□□□□ -0.3
VAMP1-207ENST00000539047 NKX3-1Q99801 234 aaPredicted RBP13.15□□□□□ -0.3
VAMP1-207ENST00000539047 DHRS9Q9BPW9 319 aa13.15□□□□□ -0.3
VAMP1-207ENST00000539047 TMEM59Q9BXS4 323 aa13.15□□□□□ -0.3
VAMP1-207ENST00000539047 PKIBQ9C010 78 aa13.15□□□□□ -0.3
VAMP1-207ENST00000539047 ATG5Q9H1Y0 275 aa13.15□□□□□ -0.3
VAMP1-207ENST00000539047 ABCG5Q9H222 651 aa13.15□□□□□ -0.3
VAMP1-207ENST00000539047 MIXL1Q9H2W2 232 aa13.15□□□□□ -0.3
VAMP1-207ENST00000539047 MSL2Q9HCI7 577 aa13.15□□□□□ -0.3
VAMP1-207ENST00000539047 AKIP1Q9NQ31 210 aa13.15□□□□□ -0.3
VAMP1-207ENST00000539047 FBLN5Q9UBX5 448 aa13.15□□□□□ -0.3
VAMP1-207ENST00000539047 PRR14LQ5THK1 2151 aa13.15□□□□□ -0.3
VAMP1-207ENST00000539047 A6NLC8 198 aa13.14□□□□□ -0.31
VAMP1-207ENST00000539047 DEFB108AA8MXU0 73 aa13.14□□□□□ -0.31
VAMP1-207ENST00000539047 PRSS44E7EML9 344 aa13.14□□□□□ -0.31
VAMP1-207ENST00000539047 TRAPPC2LH3BP13 241 aa13.14□□□□□ -0.31
VAMP1-207ENST00000539047 M0R233 179 aa13.14□□□□□ -0.31
VAMP1-207ENST00000539047 EIF4EP06730 217 aaKnown RBP13.14□□□□□ -0.31
VAMP1-207ENST00000539047 BMP4P12644 408 aa13.14□□□□□ -0.31
VAMP1-207ENST00000539047 ELK1P19419 428 aa13.14□□□□□ -0.31
VAMP1-207ENST00000539047 SERPINA2P20848 420 aa13.14□□□□□ -0.31
VAMP1-207ENST00000539047 PTBP1P26599 531 aaKnown RBP eCLIP13.14□□□□□ -0.31
VAMP1-207ENST00000539047 ETV6P41212 452 aa13.14□□□□□ -0.31
VAMP1-207ENST00000539047 NR4A2P43354 598 aa13.14□□□□□ -0.31
VAMP1-207ENST00000539047 ZP1P60852 638 aa13.14□□□□□ -0.31
VAMP1-207ENST00000539047 SNRPD2P62316 118 aaKnown RBP13.14□□□□□ -0.31
VAMP1-207ENST00000539047 PITPNAQ00169 270 aa13.14□□□□□ -0.31
VAMP1-207ENST00000539047 IL18Q14116 193 aa13.14□□□□□ -0.31
VAMP1-207ENST00000539047 ZNF672Q499Z4 452 aaPredicted RBP13.14□□□□□ -0.31
VAMP1-207ENST00000539047 RAB12Q6IQ22 244 aa13.14□□□□□ -0.31
VAMP1-207ENST00000539047 HAGHLQ6PII5 290 aaPredicted RBP13.14□□□□□ -0.31
VAMP1-207ENST00000539047 SLC25A26Q70HW3 274 aa13.14□□□□□ -0.31
VAMP1-207ENST00000539047 CCDC190Q86UF4 302 aa13.14□□□□□ -0.31
VAMP1-207ENST00000539047 LRP11Q86VZ4 500 aa13.14□□□□□ -0.31
VAMP1-207ENST00000539047 OR51F2Q8NH61 342 aa13.14□□□□□ -0.31
VAMP1-207ENST00000539047 PPP1R3EQ9H7J1 279 aa13.14□□□□□ -0.31
VAMP1-207ENST00000539047 CISD1Q9NZ45 108 aaKnown RBP13.14□□□□□ -0.31
VAMP1-207ENST00000539047 IL36GQ9NZH8 169 aa13.14□□□□□ -0.31
VAMP1-207ENST00000539047 IGKV1-27A0A075B6S5 117 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms