RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 Q499Y3 187 aa10.52□□□□□ -0.73
CLSTN3-208ENST00000538933 ACSM3Q53FZ2 586 aa10.52□□□□□ -0.73
CLSTN3-208ENST00000538933 CEACAM19Q7Z692 300 aa10.52□□□□□ -0.73
CLSTN3-208ENST00000538933 SIGLECL1Q8N7X8 197 aa10.52□□□□□ -0.73
CLSTN3-208ENST00000538933 SYNPRQ8TBG9 265 aa10.52□□□□□ -0.73
CLSTN3-208ENST00000538933 RNF166Q96A37 237 aaPredicted RBP10.52□□□□□ -0.73
CLSTN3-208ENST00000538933 CMBLQ96DG6 245 aa10.52□□□□□ -0.73
CLSTN3-208ENST00000538933 YIPF6Q96EC8 236 aa10.52□□□□□ -0.73
CLSTN3-208ENST00000538933 DUX5Q96PT3 197 aa10.52□□□□□ -0.73
CLSTN3-208ENST00000538933 OR14A2Q96R54 314 aa10.52□□□□□ -0.73
CLSTN3-208ENST00000538933 FUNDC2Q9BWH2 189 aa10.52□□□□□ -0.73
CLSTN3-208ENST00000538933 POFUT1Q9H488 388 aa10.52□□□□□ -0.73
CLSTN3-208ENST00000538933 DYNLRB1Q9NP97 96 aa10.52□□□□□ -0.73
CLSTN3-208ENST00000538933 ZNF275Q9NSD4 429 aaPredicted RBP10.52□□□□□ -0.73
CLSTN3-208ENST00000538933 CKLFQ9UBR5 152 aa10.52□□□□□ -0.73
CLSTN3-208ENST00000538933 DUSP13Q9UII6 198 aa10.52□□□□□ -0.73
CLSTN3-208ENST00000538933 ENPP5Q9UJA9 477 aa10.52□□□□□ -0.73
CLSTN3-208ENST00000538933 PIGLQ9Y2B2 252 aa10.52□□□□□ -0.73
CLSTN3-208ENST00000538933 hCG_38984A0A1B0GV85 526 aa10.51□□□□□ -0.73
CLSTN3-208ENST00000538933 DNAJC9-AS1A6NH13 148 aa10.51□□□□□ -0.73
CLSTN3-208ENST00000538933 ANKRD30BLA7E2S9 258 aa10.51□□□□□ -0.73
CLSTN3-208ENST00000538933 ZNF879B4DU55 563 aa10.51□□□□□ -0.73
CLSTN3-208ENST00000538933 H3BSA7 217 aa10.51□□□□□ -0.73
CLSTN3-208ENST00000538933 GABRPO00591 440 aa10.51□□□□□ -0.73
CLSTN3-208ENST00000538933 RP2O75695 350 aa10.51□□□□□ -0.73
CLSTN3-208ENST00000538933 GATBO75879 557 aaKnown RBP10.51□□□□□ -0.73
CLSTN3-208ENST00000538933 ARL6IP5O75915 188 aa10.51□□□□□ -0.73
CLSTN3-208ENST00000538933 RAC2P15153 192 aa10.51□□□□□ -0.73
CLSTN3-208ENST00000538933 CCL1P22362 96 aa10.51□□□□□ -0.73
CLSTN3-208ENST00000538933 MYL9P24844 172 aa10.51□□□□□ -0.73
CLSTN3-208ENST00000538933 FPR2P25090 351 aa10.51□□□□□ -0.73
CLSTN3-208ENST00000538933 TGFBR2P37173 567 aa10.51□□□□□ -0.73
CLSTN3-208ENST00000538933 DDOSTP39656 456 aa10.51□□□□□ -0.73
CLSTN3-208ENST00000538933 GSK3AP49840 483 aa10.51□□□□□ -0.73
CLSTN3-208ENST00000538933 PRSS12P56730 875 aa10.51□□□□□ -0.73
CLSTN3-208ENST00000538933 KLF3P57682 345 aaPredicted RBP10.51□□□□□ -0.73
CLSTN3-208ENST00000538933 FAM3AP98173 230 aa10.51□□□□□ -0.73
CLSTN3-208ENST00000538933 FABP5Q01469 135 aa10.51□□□□□ -0.73
CLSTN3-208ENST00000538933 MOGQ16653 247 aa10.51□□□□□ -0.73
CLSTN3-208ENST00000538933 OR2T2Q6IF00 324 aa10.51□□□□□ -0.73
CLSTN3-208ENST00000538933 FBXW12Q6X9E4 464 aa10.51□□□□□ -0.73
CLSTN3-208ENST00000538933 OR5AS1Q8N127 324 aa10.51□□□□□ -0.73
CLSTN3-208ENST00000538933 BHLHE23Q8NDY6 225 aa10.51□□□□□ -0.73
CLSTN3-208ENST00000538933 CSNK2A3Q8NEV1 391 aa10.51□□□□□ -0.73
CLSTN3-208ENST00000538933 OR56B2PQ8NGI1 322 aa10.51□□□□□ -0.73
CLSTN3-208ENST00000538933 OR51A4Q8NGJ6 313 aa10.51□□□□□ -0.73
CLSTN3-208ENST00000538933 OR10AC1Q8NH08 325 aa10.51□□□□□ -0.73
CLSTN3-208ENST00000538933 KLF14Q8TD94 323 aaPredicted RBP10.51□□□□□ -0.73
CLSTN3-208ENST00000538933 RDH5Q92781 318 aa10.51□□□□□ -0.73
CLSTN3-208ENST00000538933 ITFG2Q969R8 447 aa10.51□□□□□ -0.73
CLSTN3-208ENST00000538933 TMEM106AQ96A25 262 aa10.51□□□□□ -0.73
CLSTN3-208ENST00000538933 SPSB4Q96A44 273 aa10.51□□□□□ -0.73
CLSTN3-208ENST00000538933 LYZL4Q96KX0 146 aa10.51□□□□□ -0.73
CLSTN3-208ENST00000538933 PAPOLGQ9BWT3 736 aaKnown RBP10.51□□□□□ -0.73
CLSTN3-208ENST00000538933 OR51E2Q9H255 320 aa10.51□□□□□ -0.73
CLSTN3-208ENST00000538933 GPR160Q9UJ42 338 aa10.51□□□□□ -0.73
CLSTN3-208ENST00000538933 A0A0G2JMP0 313 aa10.5□□□□□ -0.73
CLSTN3-208ENST00000538933 A0A0X1KG70 313 aa10.5□□□□□ -0.73
CLSTN3-208ENST00000538933 A0A1B0GTI1 187 aa10.5□□□□□ -0.73
CLSTN3-208ENST00000538933 TRDV1A0A1B0GX56 115 aa10.5□□□□□ -0.73
CLSTN3-208ENST00000538933 A0A1W2PPK0 400 aa10.5□□□□□ -0.73
CLSTN3-208ENST00000538933 PLSCR5A0PG75 271 aa10.5□□□□□ -0.73
CLSTN3-208ENST00000538933 RNASE1P07998 156 aaKnown RBP10.5□□□□□ -0.73
CLSTN3-208ENST00000538933 MDKP21741 143 aaPredicted RBP10.5□□□□□ -0.73
CLSTN3-208ENST00000538933 GALP22466 123 aa10.5□□□□□ -0.73
CLSTN3-208ENST00000538933 ANOS1P23352 680 aa10.5□□□□□ -0.73
CLSTN3-208ENST00000538933 EVX1P49640 407 aa10.5□□□□□ -0.73
CLSTN3-208ENST00000538933 LSM3P62310 102 aaKnown RBP10.5□□□□□ -0.73
CLSTN3-208ENST00000538933 PPP3R1P63098 170 aa10.5□□□□□ -0.73
CLSTN3-208ENST00000538933 MRPS11P82912 194 aaKnown RBP10.5□□□□□ -0.73
CLSTN3-208ENST00000538933 NKPD1Q17RQ9 610 aa10.5□□□□□ -0.73
CLSTN3-208ENST00000538933 HSD17B12Q53GQ0 312 aa10.5□□□□□ -0.73
CLSTN3-208ENST00000538933 ZMAT1Q5H9K5 638 aa10.5□□□□□ -0.73
CLSTN3-208ENST00000538933 MBNL2Q5VZF2 373 aaKnown RBP10.5□□□□□ -0.73
CLSTN3-208ENST00000538933 GDPGP1Q6ZNW5 385 aa10.5□□□□□ -0.73
CLSTN3-208ENST00000538933 OR4M2Q8NGB6 313 aa10.5□□□□□ -0.73
CLSTN3-208ENST00000538933 OR14K1Q8NGZ2 314 aa10.5□□□□□ -0.73
CLSTN3-208ENST00000538933 RGP1Q92546 391 aaPredicted RBP10.5□□□□□ -0.73
CLSTN3-208ENST00000538933 FGGYQ96C11 551 aa10.5□□□□□ -0.73
CLSTN3-208ENST00000538933 C10orf35Q96D05 121 aa10.5□□□□□ -0.73
CLSTN3-208ENST00000538933 HAVCR1Q96D42 359 aa10.5□□□□□ -0.73
CLSTN3-208ENST00000538933 MARS2Q96GW9 593 aaKnown RBP10.5□□□□□ -0.73
CLSTN3-208ENST00000538933 SYT3Q9BQG1 590 aa10.5□□□□□ -0.73
CLSTN3-208ENST00000538933 NEK6Q9HC98 313 aa10.5□□□□□ -0.73
CLSTN3-208ENST00000538933 TCF7L1Q9HCS4 588 aa10.5□□□□□ -0.73
CLSTN3-208ENST00000538933 NDUFA13Q9P0J0 144 aa10.5□□□□□ -0.73
CLSTN3-208ENST00000538933 PURGQ9UJV8 347 aaKnown RBP10.5□□□□□ -0.73
CLSTN3-208ENST00000538933 SF3B6Q9Y3B4 125 aaKnown RBP10.5□□□□□ -0.73
CLSTN3-208ENST00000538933 V9GYS6 101 aa10.5□□□□□ -0.73
CLSTN3-208ENST00000538933 DNAH3Q8TD57 4116 aa10.49□□□□□ -0.73
CLSTN3-208ENST00000538933 TRBV5-5A0A0J9YX44 114 aa10.49□□□□□ -0.73
CLSTN3-208ENST00000538933 ZNF816-ZNF321PA0A0X1KG74 233 aa10.49□□□□□ -0.73
CLSTN3-208ENST00000538933 A6NIN4 97 aa10.49□□□□□ -0.73
CLSTN3-208ENST00000538933 DHRS7CA6NNS2 312 aa10.49□□□□□ -0.73
CLSTN3-208ENST00000538933 CD300LBA8K4G0 201 aa10.49□□□□□ -0.73
CLSTN3-208ENST00000538933 PPIHO43447 177 aaKnown RBP10.49□□□□□ -0.73
CLSTN3-208ENST00000538933 NCR1O76036 304 aa10.49□□□□□ -0.73
CLSTN3-208ENST00000538933 IGLV3-1P01715 115 aa10.49□□□□□ -0.73
CLSTN3-208ENST00000538933 FAHP16930 419 aa10.49□□□□□ -0.73
CLSTN3-208ENST00000538933 MPV17P39210 176 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms