RNA–Protein interactions for RNA: ENST00000537004.5

CLIP1-208, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 2,000 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-208ENST00000537004 OR14K1Q8NGZ2 314 aa10.31□□□□□ -0.76
CLIP1-208ENST00000537004 PARPBPQ9NWS1 579 aa10.31□□□□□ -0.76
CLIP1-208ENST00000537004 SETD2Q9BYW2 2564 aaPredicted RBP10.3□□□□□ -0.76
CLIP1-208ENST00000537004 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.3□□□□□ -0.76
CLIP1-208ENST00000537004 NAP1L6A6NFF2 107 aa10.3□□□□□ -0.76
CLIP1-208ENST00000537004 H7C417 338 aa10.3□□□□□ -0.76
CLIP1-208ENST00000537004 GMDSO60547 372 aa10.3□□□□□ -0.76
CLIP1-208ENST00000537004 DHFRP00374 187 aa10.3□□□□□ -0.76
CLIP1-208ENST00000537004 ZNF32P17041 273 aa10.3□□□□□ -0.76
CLIP1-208ENST00000537004 RAB6AP20340 208 aa10.3□□□□□ -0.76
CLIP1-208ENST00000537004 IGHV1-2P23083 117 aa10.3□□□□□ -0.76
CLIP1-208ENST00000537004 ZNF93P35789 620 aaPredicted RBP10.3□□□□□ -0.76
CLIP1-208ENST00000537004 ECH1Q13011 328 aa10.3□□□□□ -0.76
CLIP1-208ENST00000537004 TSPO2Q5TGU0 170 aa10.3□□□□□ -0.76
CLIP1-208ENST00000537004 OR1F12Q8NHA8 337 aa10.3□□□□□ -0.76
CLIP1-208ENST00000537004 GAL3ST1Q99999 423 aa10.3□□□□□ -0.76
CLIP1-208ENST00000537004 MTFP1Q9UDX5 166 aa10.3□□□□□ -0.76
CLIP1-208ENST00000537004 OR6C6A6NF89 314 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 RBBP9O75884 186 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 DHRS3O75911 302 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 BPNT1O95861 308 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 PLAUP00749 431 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 ALDOBP05062 364 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 PATE4P0C8F1 98 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 IL32P24001 234 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 PRSS3P35030 304 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 GNG2P59768 71 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 GUCA2AQ02747 115 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 CDK10Q15131 360 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 STK11Q15831 433 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 C9orf135Q5VTT2 229 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 OLFML2AQ68BL7 652 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 SFRP4Q6FHJ7 346 aaPredicted RBP10.29□□□□□ -0.76
CLIP1-208ENST00000537004 DRAM2Q6UX65 266 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 BTN2A1Q7KYR7 527 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 ZNF627Q7L945 461 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 SLC16A14Q7RTX9 510 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 AKR7LQ8NHP1 331 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 ANGPTL6Q8NI99 470 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 APH1AQ96BI3 265 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 SPACA5Q96QH8 159 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 ARPC5LQ9BPX5 153 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 LINC00470Q9BZP3 86 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 RAB22AQ9UL26 194 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 TIMM10BQ9Y5J6 103 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 FLNAP21333 2647 aaKnown RBP10.29□□□□□ -0.76
CLIP1-208ENST00000537004 A0A0A6YYH2 397 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 A0A0A6YYJ9 748 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 A6NJ64 397 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 HCKP08631 526 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 PCBD1P61457 104 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 RRAS2P62070 204 aaPredicted RBP10.29□□□□□ -0.76
CLIP1-208ENST00000537004 QRFPP83859 136 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 PSG4Q00888 419 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 FAPQ12884 760 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 UNC119Q13432 240 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 P2RY6Q15077 328 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 PCGF3Q3KNV8 242 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 SNAI3Q3KNW1 292 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 FBXW9Q5XUX1 488 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 SIGIRRQ6IA17 410 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 BHLHA15Q7RTS1 189 aaPredicted RBP10.29□□□□□ -0.76
CLIP1-208ENST00000537004 RNF144BQ7Z419 303 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 ANGPTL5Q86XS5 388 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 SKA3Q8IX90 412 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 PAQR4Q8N4S7 273 aaPredicted RBP10.29□□□□□ -0.76
CLIP1-208ENST00000537004 OR52H1Q8NGJ2 320 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 PLPPR2Q96GM1 343 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 BEX2Q9BXY8 128 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 OR2H1Q9GZK4 316 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 OR10A2Q9H208 303 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 RANGRFQ9HD47 186 aaPredicted RBP10.29□□□□□ -0.76
CLIP1-208ENST00000537004 SLC7A10Q9NS82 523 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 MCUBQ9NWR8 336 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 V9GYS6 101 aa10.29□□□□□ -0.76
CLIP1-208ENST00000537004 NIPBLQ6KC79 2804 aaeCLIP10.28□□□□□ -0.76
CLIP1-208ENST00000537004 A0A1W2PR80 420 aa10.28□□□□□ -0.76
CLIP1-208ENST00000537004 RAD51DO75771 328 aa10.28□□□□□ -0.76
CLIP1-208ENST00000537004 FARS2O95363 451 aaKnown RBP10.28□□□□□ -0.76
CLIP1-208ENST00000537004 CSF1P09603 554 aa10.28□□□□□ -0.76
CLIP1-208ENST00000537004 H2AFB2P0C5Z0 115 aa10.28□□□□□ -0.76
CLIP1-208ENST00000537004 VSIG8P0DPA2 414 aa10.28□□□□□ -0.76
CLIP1-208ENST00000537004 CD83Q01151 205 aa10.28□□□□□ -0.76
CLIP1-208ENST00000537004 HGFACQ04756 655 aa10.28□□□□□ -0.76
CLIP1-208ENST00000537004 MOGAT2Q3SYC2 334 aa10.28□□□□□ -0.76
CLIP1-208ENST00000537004 NRN1LQ496H8 165 aa10.28□□□□□ -0.76
CLIP1-208ENST00000537004 AWAT2Q6E213 333 aa10.28□□□□□ -0.76
CLIP1-208ENST00000537004 FAAP20Q6NZ36 180 aa10.28□□□□□ -0.76
CLIP1-208ENST00000537004 CDH26Q8IXH8 852 aa10.28□□□□□ -0.76
CLIP1-208ENST00000537004 STEAP2Q8NFT2 490 aa10.28□□□□□ -0.76
CLIP1-208ENST00000537004 OR56B4Q8NH76 319 aa10.28□□□□□ -0.76
CLIP1-208ENST00000537004 GRPEL2Q8TAA5 225 aa10.28□□□□□ -0.76
CLIP1-208ENST00000537004 FGFBP3Q8TAT2 258 aa10.28□□□□□ -0.76
CLIP1-208ENST00000537004 AKAP1Q92667 903 aaKnown RBP eCLIP10.28□□□□□ -0.76
CLIP1-208ENST00000537004 FAM46BQ96A09 425 aa10.28□□□□□ -0.76
CLIP1-208ENST00000537004 DMRTB1Q96MA1 342 aa10.28□□□□□ -0.76
CLIP1-208ENST00000537004 WNT5BQ9H1J7 359 aa10.28□□□□□ -0.76
CLIP1-208ENST00000537004 C20orf85Q9H1P6 137 aa10.28□□□□□ -0.76
CLIP1-208ENST00000537004 SLA2Q9H6Q3 261 aa10.28□□□□□ -0.76
CLIP1-208ENST00000537004 UBTD1Q9HAC8 227 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms