RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 OR14I1A6ND48 311 aa11.28□□□□□ -0.6
CDK5RAP3-202ENST00000536708 WIPF3A6NGB9 483 aa11.28□□□□□ -0.6
CDK5RAP3-202ENST00000536708 RFPL4AA6NLU0 287 aa11.28□□□□□ -0.6
CDK5RAP3-202ENST00000536708 RFPL4AL1F8VTS6 287 aa11.28□□□□□ -0.6
CDK5RAP3-202ENST00000536708 ARPC5O15511 151 aa11.28□□□□□ -0.6
CDK5RAP3-202ENST00000536708 NDUFA2O43678 99 aa11.28□□□□□ -0.6
CDK5RAP3-202ENST00000536708 SIX6O95475 246 aa11.28□□□□□ -0.6
CDK5RAP3-202ENST00000536708 AMY2AP04746 511 aa11.28□□□□□ -0.6
CDK5RAP3-202ENST00000536708 RPA2P15927 270 aa11.28□□□□□ -0.6
CDK5RAP3-202ENST00000536708 C4orf46Q504U0 113 aa11.28□□□□□ -0.6
CDK5RAP3-202ENST00000536708 TSPO2Q5TGU0 170 aa11.28□□□□□ -0.6
CDK5RAP3-202ENST00000536708 DCAF12L2Q5VW00 463 aa11.28□□□□□ -0.6
CDK5RAP3-202ENST00000536708 MCEMP1Q8IX19 187 aa11.28□□□□□ -0.6
CDK5RAP3-202ENST00000536708 C20orf196Q8IYI0 205 aa11.28□□□□□ -0.6
CDK5RAP3-202ENST00000536708 OR5D14Q8NGL3 314 aa11.28□□□□□ -0.6
CDK5RAP3-202ENST00000536708 OR13C8Q8NGS7 320 aa11.28□□□□□ -0.6
CDK5RAP3-202ENST00000536708 FAM46BQ96A09 425 aa11.28□□□□□ -0.6
CDK5RAP3-202ENST00000536708 SEC61A2Q9H9S3 476 aa11.28□□□□□ -0.6
CDK5RAP3-202ENST00000536708 CRLF2Q9HC73 371 aa11.28□□□□□ -0.6
CDK5RAP3-202ENST00000536708 FAM215AQ9Y5M1 114 aa11.28□□□□□ -0.6
CDK5RAP3-202ENST00000536708 DISC1C4P0D8 188 aa11.28□□□□□ -0.6
CDK5RAP3-202ENST00000536708 ZNF878C9JN71 531 aa11.28□□□□□ -0.6
CDK5RAP3-202ENST00000536708 SYT7O43581 403 aa11.28□□□□□ -0.6
CDK5RAP3-202ENST00000536708 CD8AP01732 235 aa11.28□□□□□ -0.6
CDK5RAP3-202ENST00000536708 HLA-GP17693 338 aa11.28□□□□□ -0.6
CDK5RAP3-202ENST00000536708 FOXG1P55316 489 aaPredicted RBP11.28□□□□□ -0.6
CDK5RAP3-202ENST00000536708 RNPS1Q15287 305 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-202ENST00000536708 LY6G6FQ5SQ64 297 aa11.28□□□□□ -0.6
CDK5RAP3-202ENST00000536708 ATPAF1Q5TC12 328 aaPredicted RBP11.28□□□□□ -0.6
CDK5RAP3-202ENST00000536708 C9orf135Q5VTT2 229 aa11.28□□□□□ -0.6
CDK5RAP3-202ENST00000536708 RTL6Q6ICC9 239 aa11.28□□□□□ -0.6
CDK5RAP3-202ENST00000536708 OR10K2Q6IF99 312 aa11.28□□□□□ -0.6
CDK5RAP3-202ENST00000536708 LPCAT3Q6P1A2 487 aa11.28□□□□□ -0.6
CDK5RAP3-202ENST00000536708 GSG1LQ6UXU4 331 aa11.28□□□□□ -0.6
CDK5RAP3-202ENST00000536708 P4HA3Q7Z4N8 544 aa11.28□□□□□ -0.6
CDK5RAP3-202ENST00000536708 BPIFB2Q8N4F0 458 aa11.28□□□□□ -0.6
CDK5RAP3-202ENST00000536708 EIF4E3Q8N5X7 224 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-202ENST00000536708 OR1J2Q8NGS2 313 aa11.28□□□□□ -0.6
CDK5RAP3-202ENST00000536708 OR1S1Q8NH92 325 aa11.28□□□□□ -0.6
CDK5RAP3-202ENST00000536708 TMEM45BQ96B21 275 aa11.28□□□□□ -0.6
CDK5RAP3-202ENST00000536708 ADAT3Q96EY9 351 aaPredicted RBP11.28□□□□□ -0.6
CDK5RAP3-202ENST00000536708 SLC7A10Q9NS82 523 aa11.28□□□□□ -0.6
CDK5RAP3-202ENST00000536708 ZNF175Q9Y473 711 aa11.28□□□□□ -0.6
CDK5RAP3-202ENST00000536708 LHFPL6Q9Y693 200 aa11.28□□□□□ -0.6
CDK5RAP3-202ENST00000536708 FXYD6-FXYD2A0A087WZ82 144 aa11.27□□□□□ -0.61
CDK5RAP3-202ENST00000536708 TMEM14DPA8MWL7 114 aa11.27□□□□□ -0.61
CDK5RAP3-202ENST00000536708 M0QYG6 137 aa11.27□□□□□ -0.61
CDK5RAP3-202ENST00000536708 MRPL33O75394 65 aaKnown RBP11.27□□□□□ -0.61
CDK5RAP3-202ENST00000536708 ERCC1P07992 297 aaPredicted RBP11.27□□□□□ -0.61
CDK5RAP3-202ENST00000536708 RAB3AP20336 220 aa11.27□□□□□ -0.61
CDK5RAP3-202ENST00000536708 UNC119Q13432 240 aa11.27□□□□□ -0.61
CDK5RAP3-202ENST00000536708 SEM1Q6ZVN7 128 aa11.27□□□□□ -0.61
CDK5RAP3-202ENST00000536708 ZNF584Q8IVC4 421 aa11.27□□□□□ -0.61
CDK5RAP3-202ENST00000536708 PDZD9Q8IXQ8 264 aa11.27□□□□□ -0.61
CDK5RAP3-202ENST00000536708 ZDHHC22Q8N966 263 aa11.27□□□□□ -0.61
CDK5RAP3-202ENST00000536708 OR52N4Q8NGI2 321 aa11.27□□□□□ -0.61
CDK5RAP3-202ENST00000536708 OR10Z1Q8NGY1 313 aa11.27□□□□□ -0.61
CDK5RAP3-202ENST00000536708 OR6K3Q8NGY3 331 aa11.27□□□□□ -0.61
CDK5RAP3-202ENST00000536708 DMRTA2Q96SC8 542 aa11.27□□□□□ -0.61
CDK5RAP3-202ENST00000536708 SLC6A7Q99884 636 aa11.27□□□□□ -0.61
CDK5RAP3-202ENST00000536708 PRRT1Q99946 306 aa11.27□□□□□ -0.61
CDK5RAP3-202ENST00000536708 ARL6Q9H0F7 186 aa11.27□□□□□ -0.61
CDK5RAP3-202ENST00000536708 FXYD6Q9H0Q3 95 aa11.27□□□□□ -0.61
CDK5RAP3-202ENST00000536708 TMEM235A6NFC5 223 aa11.27□□□□□ -0.61
CDK5RAP3-202ENST00000536708 VSIG8P0DPA2 414 aa11.27□□□□□ -0.61
CDK5RAP3-202ENST00000536708 FCGR2AP12318 317 aa11.27□□□□□ -0.61
CDK5RAP3-202ENST00000536708 B4GALT1P15291 398 aa11.27□□□□□ -0.61
CDK5RAP3-202ENST00000536708 CCL1P22362 96 aa11.27□□□□□ -0.61
CDK5RAP3-202ENST00000536708 FOXF2Q12947 444 aa11.27□□□□□ -0.61
CDK5RAP3-202ENST00000536708 C10orf128Q5T292 105 aa11.27□□□□□ -0.61
CDK5RAP3-202ENST00000536708 FAHD2BQ6P2I3 314 aaPredicted RBP11.27□□□□□ -0.61
CDK5RAP3-202ENST00000536708 OR2W3Q7Z3T1 314 aa11.27□□□□□ -0.61
CDK5RAP3-202ENST00000536708 FJX1Q86VR8 437 aa11.27□□□□□ -0.61
CDK5RAP3-202ENST00000536708 GPR137CQ8N3F9 429 aa11.27□□□□□ -0.61
CDK5RAP3-202ENST00000536708 STPG2Q8N412 459 aa11.27□□□□□ -0.61
CDK5RAP3-202ENST00000536708 NABP1Q96AH0 204 aa11.27□□□□□ -0.61
CDK5RAP3-202ENST00000536708 INTS12Q96CB8 462 aaKnown RBP11.27□□□□□ -0.61
CDK5RAP3-202ENST00000536708 MRPS24Q96EL2 167 aaKnown RBP11.27□□□□□ -0.61
CDK5RAP3-202ENST00000536708 FAHD2AQ96GK7 314 aa11.27□□□□□ -0.61
CDK5RAP3-202ENST00000536708 RBM24Q9BX46 236 aaKnown RBP11.27□□□□□ -0.61
CDK5RAP3-202ENST00000536708 IFT46Q9NQC8 304 aa11.27□□□□□ -0.61
CDK5RAP3-202ENST00000536708 PRSS50Q9UI38 385 aa11.27□□□□□ -0.61
CDK5RAP3-202ENST00000536708 GPR160Q9UJ42 338 aa11.27□□□□□ -0.61
CDK5RAP3-202ENST00000536708 SH3BGRL2Q9UJC5 107 aa11.27□□□□□ -0.61
CDK5RAP3-202ENST00000536708 TINAGQ9UJW2 476 aa11.27□□□□□ -0.61
CDK5RAP3-202ENST00000536708 ZNF724A8MTY0 619 aa11.26□□□□□ -0.61
CDK5RAP3-202ENST00000536708 DHHO43323 396 aa11.26□□□□□ -0.61
CDK5RAP3-202ENST00000536708 IL2RAP01589 272 aa11.26□□□□□ -0.61
CDK5RAP3-202ENST00000536708 CHRM2P08172 466 aa11.26□□□□□ -0.61
CDK5RAP3-202ENST00000536708 ABOP16442 354 aa11.26□□□□□ -0.61
CDK5RAP3-202ENST00000536708 TBPP20226 339 aa11.26□□□□□ -0.61
CDK5RAP3-202ENST00000536708 UBE2MP61081 183 aaKnown RBP11.26□□□□□ -0.61
CDK5RAP3-202ENST00000536708 FGL1Q08830 312 aa11.26□□□□□ -0.61
CDK5RAP3-202ENST00000536708 KLRB1Q12918 225 aa11.26□□□□□ -0.61
CDK5RAP3-202ENST00000536708 CEACAM16Q2WEN9 425 aa11.26□□□□□ -0.61
CDK5RAP3-202ENST00000536708 CDNFQ49AH0 187 aa11.26□□□□□ -0.61
CDK5RAP3-202ENST00000536708 ZNF660Q6AZW8 331 aaPredicted RBP11.26□□□□□ -0.61
CDK5RAP3-202ENST00000536708 VWA1Q6PCB0 445 aa11.26□□□□□ -0.61
CDK5RAP3-202ENST00000536708 SLC25A42Q86VD7 318 aa11.26□□□□□ -0.61
CDK5RAP3-202ENST00000536708 ACBD4Q8NC06 268 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms