RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 PLTPP55058 493 aa4.09□□□□□ -1.75
CLIP1-207ENST00000536634 KLF3P57682 345 aaPredicted RBP4.09□□□□□ -1.75
CLIP1-207ENST00000536634 RPS23P62266 143 aaKnown RBP4.09□□□□□ -1.75
CLIP1-207ENST00000536634 RPL38P63173 70 aaKnown RBP4.09□□□□□ -1.75
CLIP1-207ENST00000536634 CHI3L2Q15782 390 aa4.09□□□□□ -1.75
CLIP1-207ENST00000536634 ARHGAP11BQ3KRB8 267 aa4.09□□□□□ -1.75
CLIP1-207ENST00000536634 RFTN2Q52LD8 501 aaPredicted RBP4.09□□□□□ -1.75
CLIP1-207ENST00000536634 SPANXN4Q5MJ08 99 aa4.09□□□□□ -1.75
CLIP1-207ENST00000536634 CLEC6AQ6EIG7 209 aa4.09□□□□□ -1.75
CLIP1-207ENST00000536634 TMEM225Q6GV28 225 aa4.09□□□□□ -1.75
CLIP1-207ENST00000536634 ZNF620Q6ZNG0 422 aa4.09□□□□□ -1.75
CLIP1-207ENST00000536634 KRT77Q7Z794 578 aa4.09□□□□□ -1.75
CLIP1-207ENST00000536634 CROCCP3Q8IVE0 287 aa4.09□□□□□ -1.75
CLIP1-207ENST00000536634 TMEM123Q8N131 208 aa4.09□□□□□ -1.75
CLIP1-207ENST00000536634 GPR137CQ8N3F9 429 aa4.09□□□□□ -1.75
CLIP1-207ENST00000536634 PRSS35Q8N3Z0 413 aa4.09□□□□□ -1.75
CLIP1-207ENST00000536634 ARFGAP2Q8N6H7 521 aa4.09□□□□□ -1.75
CLIP1-207ENST00000536634 OCC1Q8TAD7 63 aa4.09□□□□□ -1.75
CLIP1-207ENST00000536634 SFXN5Q8TD22 340 aa4.09□□□□□ -1.75
CLIP1-207ENST00000536634 OR5P2Q8WZ92 322 aa4.09□□□□□ -1.75
CLIP1-207ENST00000536634 L3HYPDHQ96EM0 354 aa4.09□□□□□ -1.75
CLIP1-207ENST00000536634 OR2M2Q96R28 347 aa4.09□□□□□ -1.75
CLIP1-207ENST00000536634 CCT7Q99832 543 aa4.09□□□□□ -1.75
CLIP1-207ENST00000536634 ERP44Q9BS26 406 aa4.09□□□□□ -1.75
CLIP1-207ENST00000536634 ALKBH7Q9BT30 221 aaPredicted RBP4.09□□□□□ -1.75
CLIP1-207ENST00000536634 CCDC28BQ9BUN5 200 aa4.09□□□□□ -1.75
CLIP1-207ENST00000536634 IL1RAPQ9NPH3 570 aa4.09□□□□□ -1.75
CLIP1-207ENST00000536634 EXOSC3Q9NQT5 275 aaKnown RBP4.09□□□□□ -1.75
CLIP1-207ENST00000536634 C1orf109Q9NX04 203 aa4.09□□□□□ -1.75
CLIP1-207ENST00000536634 GIMAP2Q9UG22 337 aa4.09□□□□□ -1.75
CLIP1-207ENST00000536634 ATP6V1HQ9UI12 483 aa4.09□□□□□ -1.75
CLIP1-207ENST00000536634 STK38LQ9Y2H1 464 aa4.09□□□□□ -1.75
CLIP1-207ENST00000536634 NPTNQ9Y639 398 aa4.09□□□□□ -1.75
CLIP1-207ENST00000536634 KMT2AQ03164 3969 aa4.08□□□□□ -1.76
CLIP1-207ENST00000536634 FTCDNL1E5RQL4 147 aa4.08□□□□□ -1.76
CLIP1-207ENST00000536634 LSM1O15116 133 aaKnown RBP4.08□□□□□ -1.76
CLIP1-207ENST00000536634 NPIPB7O75200 414 aa4.08□□□□□ -1.76
CLIP1-207ENST00000536634 VAMP5O95183 116 aa4.08□□□□□ -1.76
CLIP1-207ENST00000536634 RAB36O95755 333 aa4.08□□□□□ -1.76
CLIP1-207ENST00000536634 SBK2P0C263 348 aa4.08□□□□□ -1.76
CLIP1-207ENST00000536634 GKN3PP0CG01 181 aa4.08□□□□□ -1.76
CLIP1-207ENST00000536634 PPIAL4GP0DN37 164 aa4.08□□□□□ -1.76
CLIP1-207ENST00000536634 OR12D1P0DN82 309 aa4.08□□□□□ -1.76
CLIP1-207ENST00000536634 UROSP10746 265 aa4.08□□□□□ -1.76
CLIP1-207ENST00000536634 H2AFXP16104 143 aaPredicted RBP4.08□□□□□ -1.76
CLIP1-207ENST00000536634 SOAT1P35610 550 aa4.08□□□□□ -1.76
CLIP1-207ENST00000536634 HPCAL1P37235 193 aa4.08□□□□□ -1.76
CLIP1-207ENST00000536634 MNAT1P51948 309 aa4.08□□□□□ -1.76
CLIP1-207ENST00000536634 NDUFV3P56181 108 aaKnown RBP4.08□□□□□ -1.76
CLIP1-207ENST00000536634 HBA1P69905 142 aa4.08□□□□□ -1.76
CLIP1-207ENST00000536634 C2orf54Q08AI8 447 aa4.08□□□□□ -1.76
CLIP1-207ENST00000536634 ZMYND11Q15326 602 aa4.08□□□□□ -1.76
CLIP1-207ENST00000536634 HIGD2BQ4VC39 106 aa4.08□□□□□ -1.76
CLIP1-207ENST00000536634 C1orf140Q5VVS0 124 aa4.08□□□□□ -1.76
CLIP1-207ENST00000536634 CARD17Q5XLA6 110 aa4.08□□□□□ -1.76
CLIP1-207ENST00000536634 TNFAIP8L2Q6P589 184 aaPredicted RBP4.08□□□□□ -1.76
CLIP1-207ENST00000536634 Q6ZR54 194 aa4.08□□□□□ -1.76
CLIP1-207ENST00000536634 C16orf62Q7Z3J2 963 aa4.08□□□□□ -1.76
CLIP1-207ENST00000536634 C6orf120Q7Z4R8 191 aa4.08□□□□□ -1.76
CLIP1-207ENST00000536634 SH2D6Q7Z4S9 175 aa4.08□□□□□ -1.76
CLIP1-207ENST00000536634 GPR141Q7Z602 305 aa4.08□□□□□ -1.76
CLIP1-207ENST00000536634 CCDC36Q8IYA8 594 aa4.08□□□□□ -1.76
CLIP1-207ENST00000536634 TMEM86BQ8N661 226 aa4.08□□□□□ -1.76
CLIP1-207ENST00000536634 KRTCAP2Q8N6L1 136 aa4.08□□□□□ -1.76
CLIP1-207ENST00000536634 CCNYL1Q8N7R7 359 aa4.08□□□□□ -1.76
CLIP1-207ENST00000536634 ZSCAN4Q8NAM6 433 aaPredicted RBP4.08□□□□□ -1.76
CLIP1-207ENST00000536634 ICA1LQ8NDH6 482 aa4.08□□□□□ -1.76
CLIP1-207ENST00000536634 FAM81AQ8TBF8 368 aa4.08□□□□□ -1.76
CLIP1-207ENST00000536634 SYNPRQ8TBG9 265 aa4.08□□□□□ -1.76
CLIP1-207ENST00000536634 MGARPQ8TDB4 240 aa4.08□□□□□ -1.76
CLIP1-207ENST00000536634 SLC26A7Q8TE54 656 aa4.08□□□□□ -1.76
CLIP1-207ENST00000536634 TOMM40LQ969M1 308 aa4.08□□□□□ -1.76
CLIP1-207ENST00000536634 ST6GALNAC6Q969X2 333 aa4.08□□□□□ -1.76
CLIP1-207ENST00000536634 NEURL3Q96EH8 262 aa4.08□□□□□ -1.76
CLIP1-207ENST00000536634 SLC35G5Q96KT7 338 aa4.08□□□□□ -1.76
CLIP1-207ENST00000536634 ATF6BQ99941 703 aa4.08□□□□□ -1.76
CLIP1-207ENST00000536634 SLC30A2Q9BRI3 323 aa4.08□□□□□ -1.76
CLIP1-207ENST00000536634 OR51I1Q9H343 314 aa4.08□□□□□ -1.76
CLIP1-207ENST00000536634 MMADHCQ9H3L0 296 aaPredicted RBP4.08□□□□□ -1.76
CLIP1-207ENST00000536634 PATZ1Q9HBE1 687 aaKnown RBP4.08□□□□□ -1.76
CLIP1-207ENST00000536634 BATF3Q9NR55 127 aa4.08□□□□□ -1.76
CLIP1-207ENST00000536634 SLCO1C1Q9NYB5 712 aa4.08□□□□□ -1.76
CLIP1-207ENST00000536634 KLK11Q9UBX7 282 aa4.08□□□□□ -1.76
CLIP1-207ENST00000536634 TP53TG3Q9ULZ0 132 aa4.08□□□□□ -1.76
CLIP1-207ENST00000536634 RASD1Q9Y272 281 aa4.08□□□□□ -1.76
CLIP1-207ENST00000536634 WDR45Q9Y484 360 aa4.08□□□□□ -1.76
CLIP1-207ENST00000536634 N6AMT1Q9Y5N5 214 aa4.08□□□□□ -1.76
CLIP1-207ENST00000536634 ALMS1Q8TCU4 4167 aa4.08□□□□□ -1.76
CLIP1-207ENST00000536634 IGHV2-70DA0A0C4DH43 119 aa4.07□□□□□ -1.76
CLIP1-207ENST00000536634 RNF103-CHMP3A0A140T963 221 aa4.07□□□□□ -1.76
CLIP1-207ENST00000536634 CFAP73A6NFT4 308 aa4.07□□□□□ -1.76
CLIP1-207ENST00000536634 NKX6-3A6NJ46 265 aa4.07□□□□□ -1.76
CLIP1-207ENST00000536634 TRIM64CA6NLI5 447 aa4.07□□□□□ -1.76
CLIP1-207ENST00000536634 CEACAM18A8MTB9 384 aa4.07□□□□□ -1.76
CLIP1-207ENST00000536634 FAAHO00519 579 aa4.07□□□□□ -1.76
CLIP1-207ENST00000536634 SIGLEC5O15389 551 aa4.07□□□□□ -1.76
CLIP1-207ENST00000536634 MLNRO43193 412 aa4.07□□□□□ -1.76
CLIP1-207ENST00000536634 FCGR3BO75015 233 aa4.07□□□□□ -1.76
CLIP1-207ENST00000536634 CRCPO75575 148 aa4.07□□□□□ -1.76
CLIP1-207ENST00000536634 MFN2O95140 757 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms