RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 MTRF1O75570 445 aaKnown RBP11.8□□□□□ -0.52
UBE3B-206ENST00000536398 PLATP00750 562 aa11.8□□□□□ -0.52
UBE3B-206ENST00000536398 PPIAL4GP0DN37 164 aa11.8□□□□□ -0.52
UBE3B-206ENST00000536398 CCL1P22362 96 aa11.8□□□□□ -0.52
UBE3B-206ENST00000536398 KIR3DL2P43630 455 aa11.8□□□□□ -0.52
UBE3B-206ENST00000536398 OR12D2P58182 307 aa11.8□□□□□ -0.52
UBE3B-206ENST00000536398 CLVS2Q5SYC1 327 aa11.8□□□□□ -0.52
UBE3B-206ENST00000536398 ATPAF1Q5TC12 328 aaPredicted RBP11.8□□□□□ -0.52
UBE3B-206ENST00000536398 CD276Q5ZPR3 534 aa11.8□□□□□ -0.52
UBE3B-206ENST00000536398 DOK3Q7L591 496 aa11.8□□□□□ -0.52
UBE3B-206ENST00000536398 ENTHD1Q8IYW4 607 aa11.8□□□□□ -0.52
UBE3B-206ENST00000536398 BATF2Q8N1L9 274 aa11.8□□□□□ -0.52
UBE3B-206ENST00000536398 ANGPTL6Q8NI99 470 aa11.8□□□□□ -0.52
UBE3B-206ENST00000536398 AQP3Q92482 292 aa11.8□□□□□ -0.52
UBE3B-206ENST00000536398 C12orf43Q96C57 262 aaKnown RBP11.8□□□□□ -0.52
UBE3B-206ENST00000536398 LGALS12Q96DT0 336 aa11.8□□□□□ -0.52
UBE3B-206ENST00000536398 C1orf147Q96MC9 270 aaPredicted RBP11.8□□□□□ -0.52
UBE3B-206ENST00000536398 GAFA1Q96PS6 74 aa11.8□□□□□ -0.52
UBE3B-206ENST00000536398 TBX15Q96SF7 602 aa11.8□□□□□ -0.52
UBE3B-206ENST00000536398 PCGF1Q9BSM1 259 aa11.8□□□□□ -0.52
UBE3B-206ENST00000536398 MS4A7Q9GZW8 240 aaPredicted RBP11.8□□□□□ -0.52
UBE3B-206ENST00000536398 AMBNQ9NP70 447 aa11.8□□□□□ -0.52
UBE3B-206ENST00000536398 FAM118AQ9NWS6 357 aa11.8□□□□□ -0.52
UBE3B-206ENST00000536398 LOC100130705A0A1B0GUX0 176 aa11.79□□□□□ -0.52
UBE3B-206ENST00000536398 DAPL1A0PJW8 107 aa11.79□□□□□ -0.52
UBE3B-206ENST00000536398 OR5B21A6NL26 309 aa11.79□□□□□ -0.52
UBE3B-206ENST00000536398 ZNF879B4DU55 563 aa11.79□□□□□ -0.52
UBE3B-206ENST00000536398 SYT7O43581 403 aa11.79□□□□□ -0.52
UBE3B-206ENST00000536398 MMP9P14780 707 aa11.79□□□□□ -0.52
UBE3B-206ENST00000536398 GLRA1P23415 457 aa11.79□□□□□ -0.52
UBE3B-206ENST00000536398 ARF6P62330 175 aa11.79□□□□□ -0.52
UBE3B-206ENST00000536398 DGUOKQ16854 277 aa11.79□□□□□ -0.52
UBE3B-206ENST00000536398 MEDAGQ5VYS4 303 aa11.79□□□□□ -0.52
UBE3B-206ENST00000536398 RUSC1-AS1Q66K80 236 aa11.79□□□□□ -0.52
UBE3B-206ENST00000536398 ZNF788Q6ZQV5 615 aa11.79□□□□□ -0.52
UBE3B-206ENST00000536398 SLC36A1Q7Z2H8 476 aa11.79□□□□□ -0.52
UBE3B-206ENST00000536398 ANGPTL5Q86XS5 388 aa11.79□□□□□ -0.52
UBE3B-206ENST00000536398 RHOXF1Q8NHV9 184 aa11.79□□□□□ -0.52
UBE3B-206ENST00000536398 TRMT10AQ8TBZ6 339 aaKnown RBP11.79□□□□□ -0.52
UBE3B-206ENST00000536398 ITFG2Q969R8 447 aa11.79□□□□□ -0.52
UBE3B-206ENST00000536398 SIRPDQ9H106 197 aa11.79□□□□□ -0.52
UBE3B-206ENST00000536398 NLKQ9UBE8 527 aa11.79□□□□□ -0.52
UBE3B-206ENST00000536398 EXOGQ9Y2C4 368 aaKnown RBP11.79□□□□□ -0.52
UBE3B-206ENST00000536398 IGKV1D-17A0A075B6S4 117 aa11.78□□□□□ -0.52
UBE3B-206ENST00000536398 A0A1B0GVI7 797 aa11.78□□□□□ -0.52
UBE3B-206ENST00000536398 PQLC2LA1A4F0 135 aa11.78□□□□□ -0.52
UBE3B-206ENST00000536398 OR2AT4A6NND4 320 aa11.78□□□□□ -0.52
UBE3B-206ENST00000536398 ANKRD65E5RJM6 399 aa11.78□□□□□ -0.52
UBE3B-206ENST00000536398 TRIM77I1YAP6 450 aa11.78□□□□□ -0.52
UBE3B-206ENST00000536398 NDUFB3O43676 98 aa11.78□□□□□ -0.52
UBE3B-206ENST00000536398 TOX4O94842 621 aa11.78□□□□□ -0.52
UBE3B-206ENST00000536398 PSG2P11465 335 aa11.78□□□□□ -0.52
UBE3B-206ENST00000536398 HAAOP46952 286 aa11.78□□□□□ -0.52
UBE3B-206ENST00000536398 GABRA2P47869 451 aa11.78□□□□□ -0.52
UBE3B-206ENST00000536398 DLX1P56177 255 aa11.78□□□□□ -0.52
UBE3B-206ENST00000536398 NANOS3P60323 173 aaKnown RBP11.78□□□□□ -0.52
UBE3B-206ENST00000536398 UBA52P62987 128 aaKnown RBP11.78□□□□□ -0.52
UBE3B-206ENST00000536398 PRB3Q04118 309 aaPredicted RBP11.78□□□□□ -0.52
UBE3B-206ENST00000536398 ZNF91Q05481 1191 aa11.78□□□□□ -0.52
UBE3B-206ENST00000536398 UBE2V2Q15819 145 aa11.78□□□□□ -0.52
UBE3B-206ENST00000536398 CDONQ4KMG0 1287 aa11.78□□□□□ -0.52
UBE3B-206ENST00000536398 LPCAT4Q643R3 524 aa11.78□□□□□ -0.52
UBE3B-206ENST00000536398 LHFPL3Q86UP9 236 aa11.78□□□□□ -0.52
UBE3B-206ENST00000536398 CALHM1Q8IU99 346 aa11.78□□□□□ -0.52
UBE3B-206ENST00000536398 PNLDC1Q8NA58 520 aaKnown RBP11.78□□□□□ -0.52
UBE3B-206ENST00000536398 ZNF671Q8TAW3 534 aa11.78□□□□□ -0.52
UBE3B-206ENST00000536398 NPRL2Q8WTW4 380 aa11.78□□□□□ -0.52
UBE3B-206ENST00000536398 FAM216AQ8WUB2 273 aa11.78□□□□□ -0.52
UBE3B-206ENST00000536398 APH1BQ8WW43 257 aa11.78□□□□□ -0.52
UBE3B-206ENST00000536398 TMIGD2Q96BF3 282 aa11.78□□□□□ -0.52
UBE3B-206ENST00000536398 WDFY2Q96P53 400 aa11.78□□□□□ -0.52
UBE3B-206ENST00000536398 FRRS1LQ9P0K9 344 aa11.78□□□□□ -0.52
UBE3B-206ENST00000536398 RPUSD1Q9UJJ7 312 aaKnown RBP11.78□□□□□ -0.52
UBE3B-206ENST00000536398 MYRFQ9Y2G1 1151 aa11.78□□□□□ -0.52
UBE3B-206ENST00000536398 CENPVL3A0A0U1RRI6 287 aa11.77□□□□□ -0.53
UBE3B-206ENST00000536398 LOC107986453A0A1B0GWG9 222 aa11.77□□□□□ -0.53
UBE3B-206ENST00000536398 FAM230AA0A1W2PPH8 454 aa11.77□□□□□ -0.53
UBE3B-206ENST00000536398 DNAJC9-AS1A6NH13 148 aa11.77□□□□□ -0.53
UBE3B-206ENST00000536398 J3QLW9 94 aa11.77□□□□□ -0.53
UBE3B-206ENST00000536398 SLC16A6O15403 523 aa11.77□□□□□ -0.53
UBE3B-206ENST00000536398 ECDO95905 644 aaPredicted RBP11.77□□□□□ -0.53
UBE3B-206ENST00000536398 LIPFP07098 398 aa11.77□□□□□ -0.53
UBE3B-206ENST00000536398 ACAA1P09110 424 aaPredicted RBP11.77□□□□□ -0.53
UBE3B-206ENST00000536398 DBTP11182 482 aaKnown RBP11.77□□□□□ -0.53
UBE3B-206ENST00000536398 ZNF19P17023 458 aa11.77□□□□□ -0.53
UBE3B-206ENST00000536398 BAMBIQ13145 260 aa11.77□□□□□ -0.53
UBE3B-206ENST00000536398 LRRC36Q1X8D7 754 aa11.77□□□□□ -0.53
UBE3B-206ENST00000536398 C9orf139Q6ZV77 190 aa11.77□□□□□ -0.53
UBE3B-206ENST00000536398 FAM220AQ7Z4H9 259 aa11.77□□□□□ -0.53
UBE3B-206ENST00000536398 PDZD9Q8IXQ8 264 aa11.77□□□□□ -0.53
UBE3B-206ENST00000536398 ACBD7Q8N6N7 88 aa11.77□□□□□ -0.53
UBE3B-206ENST00000536398 ZNRF1Q8ND25 227 aa11.77□□□□□ -0.53
UBE3B-206ENST00000536398 LY6G5BQ8NDX9 201 aa11.77□□□□□ -0.53
UBE3B-206ENST00000536398 OR2G2Q8NGZ5 317 aa11.77□□□□□ -0.53
UBE3B-206ENST00000536398 ZFAND2BQ8WV99 257 aa11.77□□□□□ -0.53
UBE3B-206ENST00000536398 TAF15Q92804 592 aaKnown RBP eCLIP11.77□□□□□ -0.53
UBE3B-206ENST00000536398 STMN2Q93045 179 aa11.77□□□□□ -0.53
UBE3B-206ENST00000536398 JMJD8Q96S16 334 aa11.77□□□□□ -0.53
UBE3B-206ENST00000536398 CNTD2Q9H8S5 307 aa11.77□□□□□ -0.53
UBE3B-206ENST00000536398 ISG20L2Q9H9L3 353 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms