RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 JSRP1Q96MG2 331 aaPredicted RBP2.15□□□□□ -2.07
SKA3-207ENST00000536239 YPEL4Q96NS1 127 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 PRAP1Q96NZ9 151 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 IL4I1Q96RQ9 567 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 HIST1H2BNQ99877 126 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 HIST1H2BMQ99879 126 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 HIST1H2BLQ99880 126 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 SLC6A7Q99884 636 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 ATF6BQ99941 703 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 RHNO1Q9BSD3 238 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 MED10Q9BTT4 135 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 MCRIP2Q9BUT9 160 aaKnown RBP2.15□□□□□ -2.07
SKA3-207ENST00000536239 MS4A8Q9BY19 250 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 CHIAQ9BZP6 476 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 SELENOIQ9C0D9 397 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 ZNF350Q9GZX5 532 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 LAT2Q9GZY6 243 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 FXYD6Q9H0Q3 95 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 RAB1BQ9H0U4 201 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 PORCNQ9H237 461 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 CPVLQ9H3G5 476 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 HRH4Q9H3N8 390 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 SRMSQ9H3Y6 488 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 SMDT1Q9H4I9 107 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 SLC32A1Q9H598 525 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 TMEM27Q9HBJ8 222 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 APOBEC3GQ9HC16 384 aaKnown RBP2.15□□□□□ -2.07
SKA3-207ENST00000536239 G6PC2Q9NQR9 355 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 MBNL1Q9NR56 388 aaKnown RBP2.15□□□□□ -2.07
SKA3-207ENST00000536239 SDR39U1Q9NRG7 319 aaPredicted RBP2.15□□□□□ -2.07
SKA3-207ENST00000536239 CUTCQ9NTM9 273 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 CBLN4Q9NTU7 201 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 DCAF13Q9NV06 445 aaKnown RBP2.15□□□□□ -2.07
SKA3-207ENST00000536239 DMAC2Q9NW81 257 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 CLN6Q9NWW5 311 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 GPR83Q9NYM4 423 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 TAS2R13Q9NYV9 303 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 CISD1Q9NZ45 108 aaKnown RBP2.15□□□□□ -2.07
SKA3-207ENST00000536239 CNIH4Q9P003 139 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 VPS29Q9UBQ0 182 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 COPS7AQ9UBW8 275 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 CACNG5Q9UF02 275 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 ZNF230Q9UIE0 474 aaPredicted RBP2.15□□□□□ -2.07
SKA3-207ENST00000536239 NPIPA1Q9UND3 350 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 ST3GAL6Q9Y274 331 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 LSM2Q9Y333 95 aaKnown RBP2.15□□□□□ -2.07
SKA3-207ENST00000536239 ZNF337Q9Y3M9 751 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 OR2W1Q9Y3N9 320 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 NME7Q9Y5B8 376 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 ARL5AQ9Y689 179 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 UBR2Q8IWV8 1755 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 ALPK3Q96L96 1907 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 FRMPD3Q5JV73 1810 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 NRAPQ86VF7 1730 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 AHDC1Q5TGY3 1603 aaPredicted RBP2.14□□□□□ -2.07
SKA3-207ENST00000536239 SLIT2O94813 1529 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 TRAV26-1A0A087WT03 109 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 IGHV2OR16-5A0A0B4J2B6 119 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 A0A1B0GW15 77 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 FAM230AA0A1W2PPH8 454 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 ELOVL7A1L3X0 281 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 ANKRD61A6NGH8 418 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 SH2D7A6NKC9 451 aaPredicted RBP2.14□□□□□ -2.07
SKA3-207ENST00000536239 FAM183AA6NL82 134 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 OR6C76A6NM76 312 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 DHRS7CA6NNS2 312 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 YJEFN3A6XGL0 299 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 F8VVB4 439 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 F8VWA3 439 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 G3V4G9 280 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 H3BN98 237 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 TNFRSF11BO00300 401 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 GABRPO00591 440 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 PEX12O00623 359 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 TGFB1I1O43294 461 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 EEF1E1O43324 174 aaKnown RBP2.14□□□□□ -2.07
SKA3-207ENST00000536239 TBX19O60806 448 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 ENTPD6O75354 484 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 CSO75390 466 aaKnown RBP2.14□□□□□ -2.07
SKA3-207ENST00000536239 SCGNO76038 276 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 UBL3O95164 117 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 OR6A2O95222 327 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 SYNGR4O95473 234 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 IGSF6O95976 241 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 MT-CO2P00403 227 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 SOD1P00441 154 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 CD8AP01732 235 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 THY1P04216 161 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 CD74P04233 296 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 PCCBP05166 539 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 FABP3P05413 133 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 ANXA4P09525 319 aaPredicted RBP2.14□□□□□ -2.07
SKA3-207ENST00000536239 OR13C7P0DN81 318 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 LAMP1P11279 417 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 TPT1P13693 172 aaKnown RBP2.14□□□□□ -2.07
SKA3-207ENST00000536239 ELK1P19419 428 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 ACHEP22303 614 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 UCP1P25874 307 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 DPP4P27487 766 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 EPHA2P29317 976 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms