RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 YY1AP1Q9H869 796 aa10.54□□□□□ -0.72
TNFRSF1A-207ENST00000535958 MED20Q9H944 212 aa10.54□□□□□ -0.72
TNFRSF1A-207ENST00000535958 C19orf12Q9NSK7 152 aa10.54□□□□□ -0.72
TNFRSF1A-207ENST00000535958 ZNF319Q9P2F9 582 aa10.54□□□□□ -0.72
TNFRSF1A-207ENST00000535958 SAMHD1Q9Y3Z3 626 aaKnown RBP10.54□□□□□ -0.72
TNFRSF1A-207ENST00000535958 LRP12Q9Y561 859 aa10.54□□□□□ -0.72
TNFRSF1A-207ENST00000535958 IGKV1D-17A0A075B6S4 117 aa10.53□□□□□ -0.72
TNFRSF1A-207ENST00000535958 OR5B21A6NL26 309 aa10.53□□□□□ -0.72
TNFRSF1A-207ENST00000535958 H3BUI4 141 aa10.53□□□□□ -0.72
TNFRSF1A-207ENST00000535958 GSC2O15499 205 aa10.53□□□□□ -0.72
TNFRSF1A-207ENST00000535958 CHST1O43916 411 aa10.53□□□□□ -0.72
TNFRSF1A-207ENST00000535958 RHBDL1O75783 438 aa10.53□□□□□ -0.72
TNFRSF1A-207ENST00000535958 FAHP16930 419 aa10.53□□□□□ -0.72
TNFRSF1A-207ENST00000535958 CD33P20138 364 aa10.53□□□□□ -0.72
TNFRSF1A-207ENST00000535958 PAX6P26367 422 aa10.53□□□□□ -0.72
TNFRSF1A-207ENST00000535958 HMGA2P52926 109 aa10.53□□□□□ -0.72
TNFRSF1A-207ENST00000535958 RPS7P62081 194 aaKnown RBP10.53□□□□□ -0.72
TNFRSF1A-207ENST00000535958 LINC01590Q5TEZ4 76 aa10.53□□□□□ -0.72
TNFRSF1A-207ENST00000535958 PLCXD3Q63HM9 321 aa10.53□□□□□ -0.72
TNFRSF1A-207ENST00000535958 HCP5Q6MZN7 132 aa10.53□□□□□ -0.72
TNFRSF1A-207ENST00000535958 HAGHLQ6PII5 290 aaPredicted RBP10.53□□□□□ -0.72
TNFRSF1A-207ENST00000535958 CYP2R1Q6VVX0 501 aa10.53□□□□□ -0.72
TNFRSF1A-207ENST00000535958 KRT77Q7Z794 578 aa10.53□□□□□ -0.72
TNFRSF1A-207ENST00000535958 ZNF561Q8N587 486 aa10.53□□□□□ -0.72
TNFRSF1A-207ENST00000535958 RPS4Y2Q8TD47 263 aa10.53□□□□□ -0.72
TNFRSF1A-207ENST00000535958 PHF21AQ96BD5 680 aa10.53□□□□□ -0.72
TNFRSF1A-207ENST00000535958 AMELYQ99218 206 aa10.53□□□□□ -0.72
TNFRSF1A-207ENST00000535958 ELAC2Q9BQ52 826 aaKnown RBP10.53□□□□□ -0.72
TNFRSF1A-207ENST00000535958 PRSS22Q9GZN4 317 aa10.53□□□□□ -0.72
TNFRSF1A-207ENST00000535958 FAM107BQ9H098 131 aa10.53□□□□□ -0.72
TNFRSF1A-207ENST00000535958 MYLK2Q9H1R3 596 aa10.53□□□□□ -0.72
TNFRSF1A-207ENST00000535958 MMP28Q9H239 520 aa10.53□□□□□ -0.72
TNFRSF1A-207ENST00000535958 AURKAIP1Q9NWT8 199 aaPredicted RBP10.53□□□□□ -0.72
TNFRSF1A-207ENST00000535958 RASL12Q9NYN1 266 aa10.53□□□□□ -0.72
TNFRSF1A-207ENST00000535958 U3KQV3 271 aa10.53□□□□□ -0.72
TNFRSF1A-207ENST00000535958 PRR23D1E9PI22 279 aaPredicted RBP10.52□□□□□ -0.73
TNFRSF1A-207ENST00000535958 PRR23D2P0DMB1 279 aaPredicted RBP10.52□□□□□ -0.73
TNFRSF1A-207ENST00000535958 PF4V1P10720 104 aa10.52□□□□□ -0.73
TNFRSF1A-207ENST00000535958 CD28P10747 220 aa10.52□□□□□ -0.73
TNFRSF1A-207ENST00000535958 DCTDP32321 178 aa10.52□□□□□ -0.73
TNFRSF1A-207ENST00000535958 PPP1R8Q12972 351 aaKnown RBP10.52□□□□□ -0.73
TNFRSF1A-207ENST00000535958 CNN3Q15417 329 aaKnown RBP10.52□□□□□ -0.73
TNFRSF1A-207ENST00000535958 MICAQ29983 383 aa10.52□□□□□ -0.73
TNFRSF1A-207ENST00000535958 CEACAM21Q3KPI0 293 aa10.52□□□□□ -0.73
TNFRSF1A-207ENST00000535958 FAM76BQ5HYJ3 339 aa10.52□□□□□ -0.73
TNFRSF1A-207ENST00000535958 ZNF770Q6IQ21 691 aaPredicted RBP10.52□□□□□ -0.73
TNFRSF1A-207ENST00000535958 ZNF782Q6ZMW2 699 aaPredicted RBP10.52□□□□□ -0.73
TNFRSF1A-207ENST00000535958 MOB3CQ70IA8 216 aa10.52□□□□□ -0.73
TNFRSF1A-207ENST00000535958 IQCF1Q8N6M8 205 aa10.52□□□□□ -0.73
TNFRSF1A-207ENST00000535958 OR8B12Q8NGG6 310 aa10.52□□□□□ -0.73
TNFRSF1A-207ENST00000535958 OR13D1Q8NGV5 346 aa10.52□□□□□ -0.73
TNFRSF1A-207ENST00000535958 OR2T27Q8NH04 317 aa10.52□□□□□ -0.73
TNFRSF1A-207ENST00000535958 OTOSQ8NHW6 89 aa10.52□□□□□ -0.73
TNFRSF1A-207ENST00000535958 SDSLQ96GA7 329 aa10.52□□□□□ -0.73
TNFRSF1A-207ENST00000535958 DGCR6LQ9BY27 220 aa10.52□□□□□ -0.73
TNFRSF1A-207ENST00000535958 LAMP5Q9UJQ1 280 aa10.52□□□□□ -0.73
TNFRSF1A-207ENST00000535958 ZNF222Q9UK12 451 aa10.52□□□□□ -0.73
TNFRSF1A-207ENST00000535958 TCF19Q9Y242 345 aa10.52□□□□□ -0.73
TNFRSF1A-207ENST00000535958 NOTCH3Q9UM47 2321 aa10.52□□□□□ -0.73
TNFRSF1A-207ENST00000535958 RFPL4AA6NLU0 287 aa10.51□□□□□ -0.73
TNFRSF1A-207ENST00000535958 RFPL4AL1F8VTS6 287 aa10.51□□□□□ -0.73
TNFRSF1A-207ENST00000535958 F2RL2O00254 374 aa10.51□□□□□ -0.73
TNFRSF1A-207ENST00000535958 SELENOFO60613 162 aa10.51□□□□□ -0.73
TNFRSF1A-207ENST00000535958 ARG1P05089 322 aa10.51□□□□□ -0.73
TNFRSF1A-207ENST00000535958 VDAC2P45880 294 aaPredicted RBP10.51□□□□□ -0.73
TNFRSF1A-207ENST00000535958 CBX1P83916 185 aa10.51□□□□□ -0.73
TNFRSF1A-207ENST00000535958 RIPPLY1Q0D2K3 151 aa10.51□□□□□ -0.73
TNFRSF1A-207ENST00000535958 HABP2Q14520 560 aaPredicted RBP10.51□□□□□ -0.73
TNFRSF1A-207ENST00000535958 SPATS1Q496A3 300 aa10.51□□□□□ -0.73
TNFRSF1A-207ENST00000535958 ZNF684Q5T5D7 378 aa10.51□□□□□ -0.73
TNFRSF1A-207ENST00000535958 KCTD18Q6PI47 426 aaPredicted RBP10.51□□□□□ -0.73
TNFRSF1A-207ENST00000535958 CRIP3Q6Q6R5 217 aa10.51□□□□□ -0.73
TNFRSF1A-207ENST00000535958 ACP7Q6ZNF0 438 aa10.51□□□□□ -0.73
TNFRSF1A-207ENST00000535958 DEFB107AQ8IZN7 70 aa10.51□□□□□ -0.73
TNFRSF1A-207ENST00000535958 OR10G2Q8NGC3 310 aa10.51□□□□□ -0.73
TNFRSF1A-207ENST00000535958 OR4M1Q8NGD0 313 aa10.51□□□□□ -0.73
TNFRSF1A-207ENST00000535958 OR5A2Q8NGI9 324 aa10.51□□□□□ -0.73
TNFRSF1A-207ENST00000535958 AQP3Q92482 292 aa10.51□□□□□ -0.73
TNFRSF1A-207ENST00000535958 LYZL4Q96KX0 146 aa10.51□□□□□ -0.73
TNFRSF1A-207ENST00000535958 OR5M11Q96RB7 305 aa10.51□□□□□ -0.73
TNFRSF1A-207ENST00000535958 CITED2Q99967 270 aaPredicted RBP10.51□□□□□ -0.73
TNFRSF1A-207ENST00000535958 CDCA4Q9BXL8 241 aa10.51□□□□□ -0.73
TNFRSF1A-207ENST00000535958 OR51I2Q9H344 312 aa10.51□□□□□ -0.73
TNFRSF1A-207ENST00000535958 ZNF702PQ9H963 129 aa10.51□□□□□ -0.73
TNFRSF1A-207ENST00000535958 OR14J1Q9UGF5 321 aa10.51□□□□□ -0.73
TNFRSF1A-207ENST00000535958 ENPP5Q9UJA9 477 aa10.51□□□□□ -0.73
TNFRSF1A-207ENST00000535958 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.51□□□□□ -0.73
TNFRSF1A-207ENST00000535958 POLDIP2Q9Y2S7 368 aa10.51□□□□□ -0.73
TNFRSF1A-207ENST00000535958 TBL2Q9Y4P3 447 aaKnown RBP10.51□□□□□ -0.73
TNFRSF1A-207ENST00000535958 PRODHO43272 600 aa10.5□□□□□ -0.73
TNFRSF1A-207ENST00000535958 MTRF1O75570 445 aaKnown RBP10.5□□□□□ -0.73
TNFRSF1A-207ENST00000535958 NXPH2O95156 264 aa10.5□□□□□ -0.73
TNFRSF1A-207ENST00000535958 MPIG6BO95866 241 aa10.5□□□□□ -0.73
TNFRSF1A-207ENST00000535958 PF4P02776 101 aa10.5□□□□□ -0.73
TNFRSF1A-207ENST00000535958 PIPP12273 146 aaPredicted RBP10.5□□□□□ -0.73
TNFRSF1A-207ENST00000535958 ATP6V1B1P15313 513 aa10.5□□□□□ -0.73
TNFRSF1A-207ENST00000535958 CCL3L1P16619 93 aa10.5□□□□□ -0.73
TNFRSF1A-207ENST00000535958 MAGEA2P43356 314 aa10.5□□□□□ -0.73
TNFRSF1A-207ENST00000535958 DYNC1I2Q13409 638 aaKnown RBP10.5□□□□□ -0.73
TNFRSF1A-207ENST00000535958 FAM98BQ52LJ0 330 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms