RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 KLHDC8BQ8IXV7 354 aa11.33□□□□□ -0.6
SPG11-203ENST00000535302 ADAT1Q9BUB4 502 aaKnown RBP11.33□□□□□ -0.6
SPG11-203ENST00000535302 MAMSTRQ6ZN01 415 aa11.33□□□□□ -0.6
SPG11-203ENST00000535302 NHLRC2Q8NBF2 726 aa11.33□□□□□ -0.6
SPG11-203ENST00000535302 OR2V1Q8NHB1 315 aa11.33□□□□□ -0.6
SPG11-203ENST00000535302 JAM3Q9BX67 310 aa11.33□□□□□ -0.6
SPG11-203ENST00000535302 GABARAPL3Q9BY60 117 aa11.33□□□□□ -0.6
SPG11-203ENST00000535302 AAMDCQ9H7C9 122 aa11.33□□□□□ -0.6
SPG11-203ENST00000535302 PRDM7Q9NQW5 492 aa11.33□□□□□ -0.6
SPG11-203ENST00000535302 NRAPQ86VF7 1730 aa11.32□□□□□ -0.6
SPG11-203ENST00000535302 A0A1B0GTQ1 180 aa11.32□□□□□ -0.6
SPG11-203ENST00000535302 ZNF716A6NP11 495 aa11.32□□□□□ -0.6
SPG11-203ENST00000535302 NOXO1Q8NFA2 376 aa11.32□□□□□ -0.6
SPG11-203ENST00000535302 BCL2L2Q92843 193 aaPredicted RBP11.32□□□□□ -0.6
SPG11-203ENST00000535302 TAAR6Q96RI8 345 aa11.32□□□□□ -0.6
SPG11-203ENST00000535302 IL17BQ9UHF5 180 aa11.32□□□□□ -0.6
SPG11-203ENST00000535302 CXCL10P02778 98 aa11.32□□□□□ -0.6
SPG11-203ENST00000535302 PATE4P0C8F1 98 aa11.32□□□□□ -0.6
SPG11-203ENST00000535302 SPNP16150 400 aa11.32□□□□□ -0.6
SPG11-203ENST00000535302 PLAURQ03405 335 aa11.32□□□□□ -0.6
SPG11-203ENST00000535302 ENDOGQ14249 297 aaKnown RBP11.32□□□□□ -0.6
SPG11-203ENST00000535302 DGAT2L6Q6ZPD8 337 aa11.32□□□□□ -0.6
SPG11-203ENST00000535302 SPEM1Q8N4L4 309 aa11.32□□□□□ -0.6
SPG11-203ENST00000535302 OR5A2Q8NGI9 324 aa11.32□□□□□ -0.6
SPG11-203ENST00000535302 IL22RA2Q969J5 263 aa11.32□□□□□ -0.6
SPG11-203ENST00000535302 SCPEP1Q9HB40 452 aa11.32□□□□□ -0.6
SPG11-203ENST00000535302 MKRN2OSH3BPM6 223 aa11.32□□□□□ -0.6
SPG11-203ENST00000535302 OR4E1P0C645 316 aa11.32□□□□□ -0.6
SPG11-203ENST00000535302 C21orf62-AS1Q17RA5 79 aa11.32□□□□□ -0.6
SPG11-203ENST00000535302 LRRC10Q5BKY1 277 aa11.32□□□□□ -0.6
SPG11-203ENST00000535302 FAM26EQ8N5C1 309 aa11.32□□□□□ -0.6
SPG11-203ENST00000535302 OR5D13Q8NGL4 314 aa11.32□□□□□ -0.6
SPG11-203ENST00000535302 C5orf52A6NGY3 159 aa11.32□□□□□ -0.6
SPG11-203ENST00000535302 TAAR9Q96RI9 348 aa11.32□□□□□ -0.6
SPG11-203ENST00000535302 VAMP8Q9BV40 100 aa11.32□□□□□ -0.6
SPG11-203ENST00000535302 SIRT3Q9NTG7 399 aaPredicted RBP11.32□□□□□ -0.6
SPG11-203ENST00000535302 ITGB4P16144 1822 aa11.32□□□□□ -0.6
SPG11-203ENST00000535302 FIGNL2A6NMB9 653 aa11.32□□□□□ -0.6
SPG11-203ENST00000535302 NDUFB3O43676 98 aa11.32□□□□□ -0.6
SPG11-203ENST00000535302 CIDEAO60543 219 aa11.32□□□□□ -0.6
SPG11-203ENST00000535302 ADRB1P08588 477 aa11.32□□□□□ -0.6
SPG11-203ENST00000535302 RAE1P78406 368 aaKnown RBP11.32□□□□□ -0.6
SPG11-203ENST00000535302 ZNF766Q5HY98 468 aa11.32□□□□□ -0.6
SPG11-203ENST00000535302 TMEM215Q68D42 235 aa11.32□□□□□ -0.6
SPG11-203ENST00000535302 TOMM20LQ6UXN7 152 aa11.32□□□□□ -0.6
SPG11-203ENST00000535302 MRGPRX4Q96LA9 322 aa11.32□□□□□ -0.6
SPG11-203ENST00000535302 C12orf57Q99622 126 aa11.32□□□□□ -0.6
SPG11-203ENST00000535302 DLL4Q9NR61 685 aa11.32□□□□□ -0.6
SPG11-203ENST00000535302 B9D1Q9UPM9 204 aa11.32□□□□□ -0.6
SPG11-203ENST00000535302 ECM29Q5VYK3 1845 aa11.31□□□□□ -0.6
SPG11-203ENST00000535302 TRGV10A0A0A0MS01 117 aa11.31□□□□□ -0.6
SPG11-203ENST00000535302 TRIM77I1YAP6 450 aa11.31□□□□□ -0.6
SPG11-203ENST00000535302 ECI1P42126 302 aa11.31□□□□□ -0.6
SPG11-203ENST00000535302 ERVS71-1P61550 626 aa11.31□□□□□ -0.6
SPG11-203ENST00000535302 RIMKLAQ8IXN7 391 aa11.31□□□□□ -0.6
SPG11-203ENST00000535302 FLYWCH2Q96CP2 140 aaKnown RBP11.31□□□□□ -0.6
SPG11-203ENST00000535302 POM121L2Q96KW2 1035 aa11.31□□□□□ -0.6
SPG11-203ENST00000535302 NPAP1Q9NZP6 1156 aa11.31□□□□□ -0.6
SPG11-203ENST00000535302 A0A1B0GTH9 108 aa11.31□□□□□ -0.6
SPG11-203ENST00000535302 RPL34P49207 117 aaKnown RBP11.31□□□□□ -0.6
SPG11-203ENST00000535302 ZNF117Q03924 483 aa11.31□□□□□ -0.6
SPG11-203ENST00000535302 TP53I13Q8NBR0 393 aaPredicted RBP11.31□□□□□ -0.6
SPG11-203ENST00000535302 TTC9Q92623 222 aa11.31□□□□□ -0.6
SPG11-203ENST00000535302 CLDN23Q96B33 292 aa11.31□□□□□ -0.6
SPG11-203ENST00000535302 LINC00052Q96N35 136 aa11.31□□□□□ -0.6
SPG11-203ENST00000535302 TMEM200CA6NKL6 621 aa11.31□□□□□ -0.6
SPG11-203ENST00000535302 H7C2G1 150 aa11.31□□□□□ -0.6
SPG11-203ENST00000535302 EMC4Q5J8M3 183 aa11.31□□□□□ -0.6
SPG11-203ENST00000535302 OSR2Q8N2R0 312 aa11.31□□□□□ -0.6
SPG11-203ENST00000535302 SLC25A21Q9BQT8 299 aaPredicted RBP11.31□□□□□ -0.6
SPG11-203ENST00000535302 VAMP5O95183 116 aa11.31□□□□□ -0.6
SPG11-203ENST00000535302 RTN4IP1Q8WWV3 396 aaPredicted RBP11.31□□□□□ -0.6
SPG11-203ENST00000535302 ST8SIA1Q92185 356 aa11.31□□□□□ -0.6
SPG11-203ENST00000535302 WDR89Q96FK6 387 aaPredicted RBP11.31□□□□□ -0.6
SPG11-203ENST00000535302 OR2A14Q96R47 310 aa11.31□□□□□ -0.6
SPG11-203ENST00000535302 CRISPLD2Q9H0B8 497 aa11.31□□□□□ -0.6
SPG11-203ENST00000535302 LSM2Q9Y333 95 aaKnown RBP11.31□□□□□ -0.6
SPG11-203ENST00000535302 LRP12Q9Y561 859 aa11.31□□□□□ -0.6
SPG11-203ENST00000535302 TRAV20A0A0B4J274 112 aa11.31□□□□□ -0.6
SPG11-203ENST00000535302 MGMTP16455 207 aa11.31□□□□□ -0.6
SPG11-203ENST00000535302 PSMB6P28072 239 aa11.31□□□□□ -0.6
SPG11-203ENST00000535302 CNN1P51911 297 aaKnown RBP11.31□□□□□ -0.6
SPG11-203ENST00000535302 PNLIPRP2P54317 469 aa11.31□□□□□ -0.6
SPG11-203ENST00000535302 TCL1AP56279 114 aa11.31□□□□□ -0.6
SPG11-203ENST00000535302 HIST1H3AP68431 136 aa11.31□□□□□ -0.6
SPG11-203ENST00000535302 ZNF793Q6ZN11 406 aa11.31□□□□□ -0.6
SPG11-203ENST00000535302 SLC16A12Q6ZSM3 486 aa11.31□□□□□ -0.6
SPG11-203ENST00000535302 ZNF629Q9UEG4 869 aaPredicted RBP11.31□□□□□ -0.6
SPG11-203ENST00000535302 PSG11Q9UQ72 335 aa11.31□□□□□ -0.6
SPG11-203ENST00000535302 U3KQ87 197 aa11.31□□□□□ -0.6
SPG11-203ENST00000535302 SSC5DA1L4H1 1573 aa11.31□□□□□ -0.6
SPG11-203ENST00000535302 IL9P15248 144 aa11.31□□□□□ -0.6
SPG11-203ENST00000535302 AVPR2P30518 371 aa11.31□□□□□ -0.6
SPG11-203ENST00000535302 GALR1P47211 349 aa11.31□□□□□ -0.6
SPG11-203ENST00000535302 DHODHQ02127 395 aa11.31□□□□□ -0.6
SPG11-203ENST00000535302 EGR3Q06889 387 aa11.31□□□□□ -0.6
SPG11-203ENST00000535302 SPACA9Q96E40 222 aaPredicted RBP11.31□□□□□ -0.6
SPG11-203ENST00000535302 A0A087WUJ7 227 aa11.3□□□□□ -0.6
SPG11-203ENST00000535302 KLK8O60259 260 aa11.3□□□□□ -0.6
SPG11-203ENST00000535302 ACTL6AO96019 429 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms