RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 TMIGD2Q96BF3 282 aa19.32■□□□□ 0.68
SMPD1-209ENST00000533196 CENPNQ96H22 339 aaPredicted RBP19.32■□□□□ 0.68
SMPD1-209ENST00000533196 GAFA1Q96PS6 74 aa19.32■□□□□ 0.68
SMPD1-209ENST00000533196 UNKLQ9H9P5 680 aaKnown RBP19.32■□□□□ 0.68
SMPD1-209ENST00000533196 ONECUT1Q9UBC0 465 aa19.32■□□□□ 0.68
SMPD1-209ENST00000533196 SLC25A10Q9UBX3 287 aaPredicted RBP19.32■□□□□ 0.68
SMPD1-209ENST00000533196 SNX5Q9Y5X3 404 aa19.32■□□□□ 0.68
SMPD1-209ENST00000533196 OR2AT4A6NND4 320 aa19.31■□□□□ 0.68
SMPD1-209ENST00000533196 SPRY1O43609 319 aaPredicted RBP19.31■□□□□ 0.68
SMPD1-209ENST00000533196 CIB2O75838 187 aa19.31■□□□□ 0.68
SMPD1-209ENST00000533196 GMFBP60983 142 aa19.31■□□□□ 0.68
SMPD1-209ENST00000533196 GUCA2AQ02747 115 aa19.31■□□□□ 0.68
SMPD1-209ENST00000533196 MFGE8Q08431 387 aaPredicted RBP19.31■□□□□ 0.68
SMPD1-209ENST00000533196 ZNF684Q5T5D7 378 aa19.31■□□□□ 0.68
SMPD1-209ENST00000533196 BCL2L15Q5TBC7 163 aa19.31■□□□□ 0.68
SMPD1-209ENST00000533196 PLCXD3Q63HM9 321 aa19.31■□□□□ 0.68
SMPD1-209ENST00000533196 Q6ZSR3 168 aa19.31■□□□□ 0.68
SMPD1-209ENST00000533196 LRTOMTQ8WZ04 291 aa19.31■□□□□ 0.68
SMPD1-209ENST00000533196 AQP3Q92482 292 aa19.31■□□□□ 0.68
SMPD1-209ENST00000533196 IL4I1Q96RQ9 567 aa19.31■□□□□ 0.68
SMPD1-209ENST00000533196 CIB1Q99828 191 aa19.31■□□□□ 0.68
SMPD1-209ENST00000533196 APOL4Q9BPW4 351 aa19.31■□□□□ 0.68
SMPD1-209ENST00000533196 GABARAPL3Q9BY60 117 aa19.31■□□□□ 0.68
SMPD1-209ENST00000533196 TTTY10Q9BZA0 68 aa19.31■□□□□ 0.68
SMPD1-209ENST00000533196 SLITRK2Q9H156 845 aa19.31■□□□□ 0.68
SMPD1-209ENST00000533196 CAB39Q9Y376 341 aaPredicted RBP19.31■□□□□ 0.68
SMPD1-209ENST00000533196 MGAM2Q2M2H8 2515 aa19.31■□□□□ 0.68
SMPD1-209ENST00000533196 M0R129 80 aa19.3■□□□□ 0.68
SMPD1-209ENST00000533196 RHBDL1O75783 438 aa19.3■□□□□ 0.68
SMPD1-209ENST00000533196 NRASP01111 189 aa19.3■□□□□ 0.68
SMPD1-209ENST00000533196 CRYBA1P05813 215 aa19.3■□□□□ 0.68
SMPD1-209ENST00000533196 FAHP16930 419 aa19.3■□□□□ 0.68
SMPD1-209ENST00000533196 TMED1Q13445 227 aa19.3■□□□□ 0.68
SMPD1-209ENST00000533196 DGUOKQ16854 277 aa19.3■□□□□ 0.68
SMPD1-209ENST00000533196 CLVS2Q5SYC1 327 aa19.3■□□□□ 0.68
SMPD1-209ENST00000533196 TMEM42Q69YG0 159 aa19.3■□□□□ 0.68
SMPD1-209ENST00000533196 LDLRAD3Q86YD5 345 aa19.3■□□□□ 0.68
SMPD1-209ENST00000533196 PPP1R14AQ96A00 147 aa19.3■□□□□ 0.68
SMPD1-209ENST00000533196 MRM2Q9UI43 246 aaKnown RBP19.3■□□□□ 0.68
SMPD1-209ENST00000533196 OR52A1Q9UKL2 312 aa19.3■□□□□ 0.68
SMPD1-209ENST00000533196 V9GYS6 101 aa19.3■□□□□ 0.68
SMPD1-209ENST00000533196 FAM181BA6NEQ2 426 aa19.29■□□□□ 0.68
SMPD1-209ENST00000533196 DLGAP1O14490 977 aa19.29■□□□□ 0.68
SMPD1-209ENST00000533196 HAGHLQ6PII5 290 aaPredicted RBP19.29■□□□□ 0.68
SMPD1-209ENST00000533196 OR51G2Q8NGK0 314 aa19.29■□□□□ 0.68
SMPD1-209ENST00000533196 OR8J1Q8NGP2 316 aa19.29■□□□□ 0.68
SMPD1-209ENST00000533196 H1FXQ92522 213 aaKnown RBP19.29■□□□□ 0.68
SMPD1-209ENST00000533196 ZNF696Q9H7X3 374 aa19.29■□□□□ 0.68
SMPD1-209ENST00000533196 ZNF222Q9UK12 451 aa19.29■□□□□ 0.68
SMPD1-209ENST00000533196 GTF2A1LQ9UNN4 478 aa19.29■□□□□ 0.68
SMPD1-209ENST00000533196 M0R1W7 72 aa19.28■□□□□ 0.68
SMPD1-209ENST00000533196 KRT8P05787 483 aa19.28■□□□□ 0.68
SMPD1-209ENST00000533196 OR2T7P0C7T2 308 aa19.28■□□□□ 0.68
SMPD1-209ENST00000533196 PSG2P11465 335 aa19.28■□□□□ 0.68
SMPD1-209ENST00000533196 SELLP14151 372 aa19.28■□□□□ 0.68
SMPD1-209ENST00000533196 HTR1FP30939 366 aa19.28■□□□□ 0.68
SMPD1-209ENST00000533196 PRR31Q5SQ13 230 aa19.28■□□□□ 0.68
SMPD1-209ENST00000533196 FIP1L1Q6UN15 594 aaKnown RBP19.28■□□□□ 0.68
SMPD1-209ENST00000533196 ZNF573Q86YE8 665 aa19.28■□□□□ 0.68
SMPD1-209ENST00000533196 POC1AQ8NBT0 407 aa19.28■□□□□ 0.68
SMPD1-209ENST00000533196 OR2T27Q8NH04 317 aa19.28■□□□□ 0.68
SMPD1-209ENST00000533196 OR4F5Q8NH21 305 aa19.28■□□□□ 0.68
SMPD1-209ENST00000533196 DYRK2Q92630 601 aa19.28■□□□□ 0.68
SMPD1-209ENST00000533196 SDSLQ96GA7 329 aa19.28■□□□□ 0.68
SMPD1-209ENST00000533196 RBM4BQ9BQ04 359 aaKnown RBP19.28■□□□□ 0.68
SMPD1-209ENST00000533196 CHIAQ9BZP6 476 aa19.28■□□□□ 0.68
SMPD1-209ENST00000533196 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP19.28■□□□□ 0.68
SMPD1-209ENST00000533196 OAZ3Q9UMX2 235 aa19.28■□□□□ 0.68
SMPD1-209ENST00000533196 IGKV1D-17A0A075B6S4 117 aa19.27■□□□□ 0.68
SMPD1-209ENST00000533196 TRBV23-1A0A0A0MS06 115 aa19.27■□□□□ 0.68
SMPD1-209ENST00000533196 J3QT63 122 aa19.27■□□□□ 0.68
SMPD1-209ENST00000533196 NOS1APO75052 506 aaPredicted RBP19.27■□□□□ 0.68
SMPD1-209ENST00000533196 SULT1C4O75897 302 aa19.27■□□□□ 0.68
SMPD1-209ENST00000533196 NDUFA7O95182 113 aa19.27■□□□□ 0.68
SMPD1-209ENST00000533196 NDUFB7P17568 137 aa19.27■□□□□ 0.68
SMPD1-209ENST00000533196 CCL1P22362 96 aa19.27■□□□□ 0.68
SMPD1-209ENST00000533196 EEF1B2P24534 225 aaKnown RBP19.27■□□□□ 0.68
SMPD1-209ENST00000533196 GABRA2P47869 451 aa19.27■□□□□ 0.68
SMPD1-209ENST00000533196 SMIM21Q3B7S5 101 aa19.27■□□□□ 0.68
SMPD1-209ENST00000533196 CCDC54Q8NEL0 328 aa19.27■□□□□ 0.68
SMPD1-209ENST00000533196 OR14K1Q8NGZ2 314 aa19.27■□□□□ 0.68
SMPD1-209ENST00000533196 RFKQ969G6 155 aa19.27■□□□□ 0.68
SMPD1-209ENST00000533196 SEMA6AQ9H2E6 1030 aa19.27■□□□□ 0.68
SMPD1-209ENST00000533196 DPAGT1Q9H3H5 408 aa19.27■□□□□ 0.68
SMPD1-209ENST00000533196 BEX1Q9HBH7 125 aa19.27■□□□□ 0.68
SMPD1-209ENST00000533196 POLDIP2Q9Y2S7 368 aa19.27■□□□□ 0.68
SMPD1-209ENST00000533196 FAM96BQ9Y3D0 163 aa19.27■□□□□ 0.68
SMPD1-209ENST00000533196 A0A0U1RQK1 487 aa19.26■□□□□ 0.67
SMPD1-209ENST00000533196 A0A1B0GTI1 187 aa19.26■□□□□ 0.67
SMPD1-209ENST00000533196 MDKP21741 143 aaPredicted RBP19.26■□□□□ 0.67
SMPD1-209ENST00000533196 IER3P46695 156 aa19.26■□□□□ 0.67
SMPD1-209ENST00000533196 BLMHQ13867 455 aa19.26■□□□□ 0.67
SMPD1-209ENST00000533196 NCR3LG1Q68D85 454 aa19.26■□□□□ 0.67
SMPD1-209ENST00000533196 ACP7Q6ZNF0 438 aa19.26■□□□□ 0.67
SMPD1-209ENST00000533196 PIP4P2Q8N4L2 257 aa19.26■□□□□ 0.67
SMPD1-209ENST00000533196 Q8N7P7 452 aa19.26■□□□□ 0.67
SMPD1-209ENST00000533196 YIPF7Q8N8F6 280 aa19.26■□□□□ 0.67
SMPD1-209ENST00000533196 RIBC2Q9H4K1 309 aa19.26■□□□□ 0.67
SMPD1-209ENST00000533196 METTL8Q9H825 291 aaKnown RBP19.26■□□□□ 0.67
SMPD1-209ENST00000533196 SIRT7Q9NRC8 400 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms