RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 ZNF230Q9UIE0 474 aaPredicted RBP13.59□□□□□ -0.23
PCDHA3-202ENST00000532566 KLHDC2Q9Y2U9 406 aa13.59□□□□□ -0.23
PCDHA3-202ENST00000532566 HOXA1P49639 335 aaPredicted RBP13.58□□□□□ -0.23
PCDHA3-202ENST00000532566 FOXL2P58012 376 aa13.58□□□□□ -0.23
PCDHA3-202ENST00000532566 GNG3P63215 75 aa13.58□□□□□ -0.23
PCDHA3-202ENST00000532566 PLA1AQ53H76 456 aa13.58□□□□□ -0.23
PCDHA3-202ENST00000532566 TMEM182Q6ZP80 229 aaPredicted RBP13.58□□□□□ -0.23
PCDHA3-202ENST00000532566 C6orf201Q7Z4U5 140 aa13.58□□□□□ -0.23
PCDHA3-202ENST00000532566 LRRTM1Q86UE6 522 aa13.58□□□□□ -0.23
PCDHA3-202ENST00000532566 LIN37Q96GY3 246 aaPredicted RBP13.58□□□□□ -0.23
PCDHA3-202ENST00000532566 SF3B5Q9BWJ5 86 aaKnown RBP13.58□□□□□ -0.23
PCDHA3-202ENST00000532566 NKX6-2Q9C056 277 aaPredicted RBP13.58□□□□□ -0.23
PCDHA3-202ENST00000532566 PPP1R3CQ9UQK1 317 aa13.58□□□□□ -0.23
PCDHA3-202ENST00000532566 FIGNL2A6NMB9 653 aa13.58□□□□□ -0.24
PCDHA3-202ENST00000532566 SULT1A3P0DMM9 295 aa13.58□□□□□ -0.24
PCDHA3-202ENST00000532566 SULT1A4P0DMN0 295 aa13.58□□□□□ -0.24
PCDHA3-202ENST00000532566 HLXQ14774 488 aaPredicted RBP13.58□□□□□ -0.24
PCDHA3-202ENST00000532566 H2BFWTQ7Z2G1 175 aa13.58□□□□□ -0.24
PCDHA3-202ENST00000532566 WDR54Q9H977 334 aa13.58□□□□□ -0.24
PCDHA3-202ENST00000532566 GFOD1Q9NXC2 390 aa13.58□□□□□ -0.24
PCDHA3-202ENST00000532566 SF3B6Q9Y3B4 125 aaKnown RBP13.58□□□□□ -0.24
PCDHA3-202ENST00000532566 ZSWIM8A7E2V4 1837 aa13.58□□□□□ -0.24
PCDHA3-202ENST00000532566 C9orf170A2RU37 121 aa13.58□□□□□ -0.24
PCDHA3-202ENST00000532566 H3BMH7 237 aa13.58□□□□□ -0.24
PCDHA3-202ENST00000532566 NME2P1O60361 137 aa13.58□□□□□ -0.24
PCDHA3-202ENST00000532566 HPXP02790 462 aa13.58□□□□□ -0.24
PCDHA3-202ENST00000532566 PATE4P0C8F1 98 aa13.58□□□□□ -0.24
PCDHA3-202ENST00000532566 CCL3P10147 92 aa13.58□□□□□ -0.24
PCDHA3-202ENST00000532566 BRICD5Q6PL45 260 aa13.58□□□□□ -0.24
PCDHA3-202ENST00000532566 SCMH1Q96GD3 660 aa13.58□□□□□ -0.24
PCDHA3-202ENST00000532566 SPTBN2O15020 2390 aa13.58□□□□□ -0.24
PCDHA3-202ENST00000532566 SSSCA1O60232 199 aa13.57□□□□□ -0.24
PCDHA3-202ENST00000532566 DUS4LO95620 317 aaKnown RBP13.57□□□□□ -0.24
PCDHA3-202ENST00000532566 CTSBP07858 339 aa13.57□□□□□ -0.24
PCDHA3-202ENST00000532566 FABP6P51161 128 aa13.57□□□□□ -0.24
PCDHA3-202ENST00000532566 RAB11AP62491 216 aa13.57□□□□□ -0.24
PCDHA3-202ENST00000532566 SPATA46Q5T0L3 261 aa13.57□□□□□ -0.24
PCDHA3-202ENST00000532566 FAM122CQ6P4D5 195 aa13.57□□□□□ -0.24
PCDHA3-202ENST00000532566 ADPRHL1Q8NDY3 354 aa13.57□□□□□ -0.24
PCDHA3-202ENST00000532566 NEUROG3Q9Y4Z2 214 aa13.57□□□□□ -0.24
PCDHA3-202ENST00000532566 SBF1O95248 1867 aa13.57□□□□□ -0.24
PCDHA3-202ENST00000532566 TO15178 435 aa13.57□□□□□ -0.24
PCDHA3-202ENST00000532566 PNLIPP16233 465 aa13.57□□□□□ -0.24
PCDHA3-202ENST00000532566 DHODHQ02127 395 aa13.57□□□□□ -0.24
PCDHA3-202ENST00000532566 DEFB109BQ30KR1 87 aa13.57□□□□□ -0.24
PCDHA3-202ENST00000532566 MRGPREQ86SM8 312 aa13.57□□□□□ -0.24
PCDHA3-202ENST00000532566 SLC38A6Q8IZM9 456 aa13.57□□□□□ -0.24
PCDHA3-202ENST00000532566 RAB18Q9NP72 206 aa13.57□□□□□ -0.24
PCDHA3-202ENST00000532566 LIN7CQ9NUP9 197 aaKnown RBP13.57□□□□□ -0.24
PCDHA3-202ENST00000532566 DCTN6O00399 190 aa13.57□□□□□ -0.24
PCDHA3-202ENST00000532566 HLA-HP01893 362 aa13.57□□□□□ -0.24
PCDHA3-202ENST00000532566 GSK3AP49840 483 aa13.57□□□□□ -0.24
PCDHA3-202ENST00000532566 SELENOPP49908 381 aa13.57□□□□□ -0.24
PCDHA3-202ENST00000532566 AVPI1Q5T686 147 aa13.57□□□□□ -0.24
PCDHA3-202ENST00000532566 FAAP24Q9BTP7 215 aa13.57□□□□□ -0.24
PCDHA3-202ENST00000532566 ADAM19Q9H013 955 aa13.57□□□□□ -0.24
PCDHA3-202ENST00000532566 SFT2D2O95562 160 aa13.57□□□□□ -0.24
PCDHA3-202ENST00000532566 HPP00738 406 aa13.57□□□□□ -0.24
PCDHA3-202ENST00000532566 NFYBP25208 207 aa13.57□□□□□ -0.24
PCDHA3-202ENST00000532566 MGAT2Q10469 447 aa13.57□□□□□ -0.24
PCDHA3-202ENST00000532566 VASH2Q86V25 355 aa13.57□□□□□ -0.24
PCDHA3-202ENST00000532566 C20orf196Q8IYI0 205 aa13.57□□□□□ -0.24
PCDHA3-202ENST00000532566 OR1J1Q8NGS3 322 aa13.57□□□□□ -0.24
PCDHA3-202ENST00000532566 CT55Q8WUE5 264 aa13.57□□□□□ -0.24
PCDHA3-202ENST00000532566 PGLYRP3Q96LB9 341 aa13.57□□□□□ -0.24
PCDHA3-202ENST00000532566 DOCK6Q96HP0 2047 aa13.56□□□□□ -0.24
PCDHA3-202ENST00000532566 TRAV17A0A0B4J275 112 aa13.56□□□□□ -0.24
PCDHA3-202ENST00000532566 NKX6-3A6NJ46 265 aa13.56□□□□□ -0.24
PCDHA3-202ENST00000532566 LRRC30A6NM36 301 aa13.56□□□□□ -0.24
PCDHA3-202ENST00000532566 HMSDA8MTL9 139 aa13.56□□□□□ -0.24
PCDHA3-202ENST00000532566 RGS13O14921 159 aa13.56□□□□□ -0.24
PCDHA3-202ENST00000532566 SHOXO15266 292 aa13.56□□□□□ -0.24
PCDHA3-202ENST00000532566 ZNF808Q8N4W9 903 aaPredicted RBP13.56□□□□□ -0.24
PCDHA3-202ENST00000532566 OR5AP2Q8NGF4 316 aa13.56□□□□□ -0.24
PCDHA3-202ENST00000532566 VWCEQ96DN2 955 aa13.56□□□□□ -0.24
PCDHA3-202ENST00000532566 TCEAL7Q9BRU2 100 aa13.56□□□□□ -0.24
PCDHA3-202ENST00000532566 STRAPQ9Y3F4 350 aaKnown RBP13.56□□□□□ -0.24
PCDHA3-202ENST00000532566 PDCD6O75340 191 aa13.56□□□□□ -0.24
PCDHA3-202ENST00000532566 MEOX1P50221 254 aa13.56□□□□□ -0.24
PCDHA3-202ENST00000532566 P2RX3P56373 397 aa13.56□□□□□ -0.24
PCDHA3-202ENST00000532566 PDCD1Q15116 288 aa13.56□□□□□ -0.24
PCDHA3-202ENST00000532566 SP6Q3SY56 376 aa13.56□□□□□ -0.24
PCDHA3-202ENST00000532566 SSX3Q99909 188 aa13.56□□□□□ -0.24
PCDHA3-202ENST00000532566 AK3Q9UIJ7 227 aa13.56□□□□□ -0.24
PCDHA3-202ENST00000532566 PATE3B3GLJ2 98 aa13.56□□□□□ -0.24
PCDHA3-202ENST00000532566 GPR31O00270 319 aa13.56□□□□□ -0.24
PCDHA3-202ENST00000532566 PRRG2O14669 202 aa13.56□□□□□ -0.24
PCDHA3-202ENST00000532566 TBX6O95947 436 aaPredicted RBP13.56□□□□□ -0.24
PCDHA3-202ENST00000532566 ZNF766Q5HY98 468 aa13.56□□□□□ -0.24
PCDHA3-202ENST00000532566 ST7LQ8TDW4 575 aa13.56□□□□□ -0.24
PCDHA3-202ENST00000532566 MAGT1Q9H0U3 335 aa13.56□□□□□ -0.24
PCDHA3-202ENST00000532566 TMEM231Q9H6L2 316 aa13.56□□□□□ -0.24
PCDHA3-202ENST00000532566 CACNA1EQ15878 2313 aa13.56□□□□□ -0.24
PCDHA3-202ENST00000532566 C7orf66A4D0T2 115 aa13.56□□□□□ -0.24
PCDHA3-202ENST00000532566 OR13C7P0DN81 318 aa13.56□□□□□ -0.24
PCDHA3-202ENST00000532566 KIR3DL2P43630 455 aa13.56□□□□□ -0.24
PCDHA3-202ENST00000532566 ZP4Q12836 540 aa13.56□□□□□ -0.24
PCDHA3-202ENST00000532566 SPANXN5Q5MJ07 72 aa13.56□□□□□ -0.24
PCDHA3-202ENST00000532566 PRAMEF5Q5TYX0 476 aa13.56□□□□□ -0.24
PCDHA3-202ENST00000532566 PRAMEF6Q5VXH4 476 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 163 ms