RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 PLCXD3Q63HM9 321 aa11.61□□□□□ -0.55
TSPAN4-220ENST00000532375 BOLLQ8N9W6 283 aaKnown RBP11.61□□□□□ -0.55
TSPAN4-220ENST00000532375 AQP3Q92482 292 aa11.61□□□□□ -0.55
TSPAN4-220ENST00000532375 RGP1Q92546 391 aaPredicted RBP11.61□□□□□ -0.55
TSPAN4-220ENST00000532375 C10orf35Q96D05 121 aa11.61□□□□□ -0.55
TSPAN4-220ENST00000532375 NEIL1Q96FI4 390 aaPredicted RBP11.61□□□□□ -0.55
TSPAN4-220ENST00000532375 MRPL48Q96GC5 212 aaKnown RBP11.61□□□□□ -0.55
TSPAN4-220ENST00000532375 TMEM80Q96HE8 168 aa11.61□□□□□ -0.55
TSPAN4-220ENST00000532375 HIST1H2AAQ96QV6 131 aa11.61□□□□□ -0.55
TSPAN4-220ENST00000532375 CHST5Q9GZS9 411 aa11.61□□□□□ -0.55
TSPAN4-220ENST00000532375 VCXQ9H320 206 aa11.61□□□□□ -0.55
TSPAN4-220ENST00000532375 CNOT2Q9NZN8 540 aaKnown RBP11.61□□□□□ -0.55
TSPAN4-220ENST00000532375 OPN4Q9UHM6 478 aa11.61□□□□□ -0.55
TSPAN4-220ENST00000532375 LRCH1Q9Y2L9 728 aa11.61□□□□□ -0.55
TSPAN4-220ENST00000532375 TRAV38-1A0A0B4J264 116 aa11.6□□□□□ -0.55
TSPAN4-220ENST00000532375 IRGMA1A4Y4 181 aa11.6□□□□□ -0.55
TSPAN4-220ENST00000532375 ANKRD61A6NGH8 418 aa11.6□□□□□ -0.55
TSPAN4-220ENST00000532375 OGG1O15527 345 aa11.6□□□□□ -0.55
TSPAN4-220ENST00000532375 AKR7A2O43488 359 aa11.6□□□□□ -0.55
TSPAN4-220ENST00000532375 RPS2P15880 293 aaKnown RBP11.6□□□□□ -0.55
TSPAN4-220ENST00000532375 MUC1P15941 1255 aaPredicted RBP11.6□□□□□ -0.55
TSPAN4-220ENST00000532375 MPZP25189 248 aa11.6□□□□□ -0.55
TSPAN4-220ENST00000532375 C21orf33P30042 268 aaPredicted RBP11.6□□□□□ -0.55
TSPAN4-220ENST00000532375 MRPL28Q13084 256 aaKnown RBP11.6□□□□□ -0.55
TSPAN4-220ENST00000532375 ATPAF1Q5TC12 328 aaPredicted RBP11.6□□□□□ -0.55
TSPAN4-220ENST00000532375 WDR25Q64LD2 544 aaPredicted RBP11.6□□□□□ -0.55
TSPAN4-220ENST00000532375 CRIP3Q6Q6R5 217 aa11.6□□□□□ -0.55
TSPAN4-220ENST00000532375 KCTD8Q6ZWB6 473 aa11.6□□□□□ -0.55
TSPAN4-220ENST00000532375 CALHM1Q8IU99 346 aa11.6□□□□□ -0.55
TSPAN4-220ENST00000532375 FGGYQ96C11 551 aa11.6□□□□□ -0.55
TSPAN4-220ENST00000532375 PDCD1LG2Q9BQ51 273 aa11.6□□□□□ -0.55
TSPAN4-220ENST00000532375 BEX2Q9BXY8 128 aa11.6□□□□□ -0.55
TSPAN4-220ENST00000532375 SHARPINQ9H0F6 387 aa11.6□□□□□ -0.55
TSPAN4-220ENST00000532375 SMURF1Q9HCE7 757 aa11.6□□□□□ -0.55
TSPAN4-220ENST00000532375 ERVK-18Q9QC07 812 aa11.6□□□□□ -0.55
TSPAN4-220ENST00000532375 KAAG1Q9UBP8 84 aa11.6□□□□□ -0.55
TSPAN4-220ENST00000532375 LPAR3Q9UBY5 353 aa11.6□□□□□ -0.55
TSPAN4-220ENST00000532375 EXOSC1Q9Y3B2 195 aaKnown RBP11.6□□□□□ -0.55
TSPAN4-220ENST00000532375 A0A1B0GW55 424 aa11.59□□□□□ -0.55
TSPAN4-220ENST00000532375 EFCAB10A6NFE3 127 aa11.59□□□□□ -0.55
TSPAN4-220ENST00000532375 H0YHG0 523 aa11.59□□□□□ -0.55
TSPAN4-220ENST00000532375 NDUFA2O43678 99 aa11.59□□□□□ -0.55
TSPAN4-220ENST00000532375 SYNGR1O43759 233 aa11.59□□□□□ -0.55
TSPAN4-220ENST00000532375 NOS1APO75052 506 aaPredicted RBP11.59□□□□□ -0.55
TSPAN4-220ENST00000532375 GYPAP02724 150 aa11.59□□□□□ -0.55
TSPAN4-220ENST00000532375 ACAA1P09110 424 aaPredicted RBP11.59□□□□□ -0.55
TSPAN4-220ENST00000532375 FAM157CP0CG43 387 aa11.59□□□□□ -0.55
TSPAN4-220ENST00000532375 DUX4L2P0CJ85 424 aa11.59□□□□□ -0.55
TSPAN4-220ENST00000532375 DUX4L3P0CJ86 424 aa11.59□□□□□ -0.55
TSPAN4-220ENST00000532375 DUX4L4P0CJ87 422 aa11.59□□□□□ -0.55
TSPAN4-220ENST00000532375 DUX4L5P0CJ88 424 aa11.59□□□□□ -0.55
TSPAN4-220ENST00000532375 DUX4L6P0CJ89 424 aa11.59□□□□□ -0.55
TSPAN4-220ENST00000532375 DUX4L7P0CJ90 424 aa11.59□□□□□ -0.55
TSPAN4-220ENST00000532375 ZNF12P17014 697 aa11.59□□□□□ -0.55
TSPAN4-220ENST00000532375 MYF6P23409 242 aa11.59□□□□□ -0.55
TSPAN4-220ENST00000532375 GBX2P52951 348 aaPredicted RBP11.59□□□□□ -0.55
TSPAN4-220ENST00000532375 CCDC58Q4VC31 144 aa11.59□□□□□ -0.55
TSPAN4-220ENST00000532375 STUMQ69YW2 141 aa11.59□□□□□ -0.55
TSPAN4-220ENST00000532375 ASPHD2Q6ICH7 369 aa11.59□□□□□ -0.55
TSPAN4-220ENST00000532375 FAHD2BQ6P2I3 314 aaPredicted RBP11.59□□□□□ -0.55
TSPAN4-220ENST00000532375 HAGHLQ6PII5 290 aaPredicted RBP11.59□□□□□ -0.55
TSPAN4-220ENST00000532375 DUX4L9Q6RFH8 374 aaPredicted RBP11.59□□□□□ -0.55
TSPAN4-220ENST00000532375 UTS2BQ765I0 119 aa11.59□□□□□ -0.55
TSPAN4-220ENST00000532375 RNF144BQ7Z419 303 aa11.59□□□□□ -0.55
TSPAN4-220ENST00000532375 BPIFB6Q8NFQ5 453 aa11.59□□□□□ -0.55
TSPAN4-220ENST00000532375 OR52N1Q8NH53 320 aa11.59□□□□□ -0.55
TSPAN4-220ENST00000532375 SGCDQ92629 289 aa11.59□□□□□ -0.55
TSPAN4-220ENST00000532375 FAHD2AQ96GK7 314 aa11.59□□□□□ -0.55
TSPAN4-220ENST00000532375 MYCBPQ99417 103 aaPredicted RBP11.59□□□□□ -0.55
TSPAN4-220ENST00000532375 ANKRD60Q9BZ19 345 aa11.59□□□□□ -0.55
TSPAN4-220ENST00000532375 RASSF4Q9H2L5 321 aa11.59□□□□□ -0.55
TSPAN4-220ENST00000532375 PAK1IP1Q9NWT1 392 aaPredicted RBP11.59□□□□□ -0.55
TSPAN4-220ENST00000532375 BABAM2Q9NXR7 383 aa11.59□□□□□ -0.55
TSPAN4-220ENST00000532375 DUX4Q9UBX2 424 aa11.59□□□□□ -0.55
TSPAN4-220ENST00000532375 HHLA2Q9UM44 414 aa11.59□□□□□ -0.55
TSPAN4-220ENST00000532375 PCDHGB5Q9Y5G0 923 aa11.59□□□□□ -0.55
TSPAN4-220ENST00000532375 INSIG2Q9Y5U4 225 aa11.59□□□□□ -0.55
TSPAN4-220ENST00000532375 TMEM212A6NML5 194 aa11.58□□□□□ -0.56
TSPAN4-220ENST00000532375 C22orf46C9J442 243 aa11.58□□□□□ -0.56
TSPAN4-220ENST00000532375 FSHBP01225 129 aa11.58□□□□□ -0.56
TSPAN4-220ENST00000532375 PGA5P0DJD9 388 aa11.58□□□□□ -0.56
TSPAN4-220ENST00000532375 PITPNBP48739 271 aa11.58□□□□□ -0.56
TSPAN4-220ENST00000532375 ERVK11-1P61568 191 aa11.58□□□□□ -0.56
TSPAN4-220ENST00000532375 PAX8Q06710 450 aa11.58□□□□□ -0.56
TSPAN4-220ENST00000532375 CDK5R1Q15078 307 aa11.58□□□□□ -0.56
TSPAN4-220ENST00000532375 ESCO2Q56NI9 601 aa11.58□□□□□ -0.56
TSPAN4-220ENST00000532375 RPL22L1Q6P5R6 122 aaKnown RBP11.58□□□□□ -0.56
TSPAN4-220ENST00000532375 IZUMO2Q6UXV1 221 aa11.58□□□□□ -0.56
TSPAN4-220ENST00000532375 ZNF788Q6ZQV5 615 aa11.58□□□□□ -0.56
TSPAN4-220ENST00000532375 ANGPTL5Q86XS5 388 aa11.58□□□□□ -0.56
TSPAN4-220ENST00000532375 ZNF573Q86YE8 665 aa11.58□□□□□ -0.56
TSPAN4-220ENST00000532375 FGFRL1Q8N441 504 aa11.58□□□□□ -0.56
TSPAN4-220ENST00000532375 POC1AQ8NBT0 407 aa11.58□□□□□ -0.56
TSPAN4-220ENST00000532375 OR5T2Q8NGG2 359 aa11.58□□□□□ -0.56
TSPAN4-220ENST00000532375 OR8B3Q8NGG8 313 aa11.58□□□□□ -0.56
TSPAN4-220ENST00000532375 ANGPTL6Q8NI99 470 aa11.58□□□□□ -0.56
TSPAN4-220ENST00000532375 GATAD2BQ8WXI9 593 aa11.58□□□□□ -0.56
TSPAN4-220ENST00000532375 PP6455Q8WZ26 134 aa11.58□□□□□ -0.56
TSPAN4-220ENST00000532375 C12orf43Q96C57 262 aaKnown RBP11.58□□□□□ -0.56
TSPAN4-220ENST00000532375 ZNF488Q96MN9 340 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms