RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 MAT2BQ9NZL9 334 aa1.8□□□□□ -2.12
CD44-234ENST00000531873 VAPAQ9P0L0 249 aa1.8□□□□□ -2.12
CD44-234ENST00000531873 OPN4Q9UHM6 478 aa1.8□□□□□ -2.12
CD44-234ENST00000531873 ENPP5Q9UJA9 477 aa1.8□□□□□ -2.12
CD44-234ENST00000531873 CFL2Q9Y281 166 aa1.8□□□□□ -2.12
CD44-234ENST00000531873 FARSAQ9Y285 508 aaKnown RBP1.8□□□□□ -2.12
CD44-234ENST00000531873 LRRC42Q9Y546 428 aa1.8□□□□□ -2.12
CD44-234ENST00000531873 PIK3R4Q99570 1358 aa1.8□□□□□ -2.12
CD44-234ENST00000531873 MED1Q15648 1581 aaPredicted RBP1.8□□□□□ -2.12
CD44-234ENST00000531873 KIAA1671Q9BY89 1806 aa1.8□□□□□ -2.12
CD44-234ENST00000531873 SLC5A10A0PJK1 596 aa1.79□□□□□ -2.12
CD44-234ENST00000531873 ZNF233A6NK53 670 aa1.79□□□□□ -2.12
CD44-234ENST00000531873 IQCF5A8MTL0 148 aa1.79□□□□□ -2.12
CD44-234ENST00000531873 MANBAO00462 879 aa1.79□□□□□ -2.12
CD44-234ENST00000531873 CCDC22O60826 627 aa1.79□□□□□ -2.12
CD44-234ENST00000531873 CCNE2O96020 404 aa1.79□□□□□ -2.12
CD44-234ENST00000531873 CD74P04233 296 aa1.79□□□□□ -2.12
CD44-234ENST00000531873 CISD3P0C7P0 127 aa1.79□□□□□ -2.12
CD44-234ENST00000531873 C1GALT1C1LP0DN25 315 aa1.79□□□□□ -2.12
CD44-234ENST00000531873 HSPD1P10809 573 aaKnown RBP1.79□□□□□ -2.12
CD44-234ENST00000531873 NQO2P16083 231 aa1.79□□□□□ -2.12
CD44-234ENST00000531873 IL12BP29460 328 aa1.79□□□□□ -2.12
CD44-234ENST00000531873 OR12D2P58182 307 aa1.79□□□□□ -2.12
CD44-234ENST00000531873 MTPNP58546 118 aa1.79□□□□□ -2.12
CD44-234ENST00000531873 KRTAP12-2P59991 146 aa1.79□□□□□ -2.12
CD44-234ENST00000531873 LRRC63Q05C16 580 aa1.79□□□□□ -2.12
CD44-234ENST00000531873 CDC20Q12834 499 aa1.79□□□□□ -2.12
CD44-234ENST00000531873 STX3Q13277 289 aa1.79□□□□□ -2.12
CD44-234ENST00000531873 SHHQ15465 462 aa1.79□□□□□ -2.12
CD44-234ENST00000531873 TOMM34Q15785 309 aaPredicted RBP1.79□□□□□ -2.12
CD44-234ENST00000531873 ZBTB6Q15916 424 aa1.79□□□□□ -2.12
CD44-234ENST00000531873 CDNFQ49AH0 187 aa1.79□□□□□ -2.12
CD44-234ENST00000531873 LINC00483Q53H64 154 aa1.79□□□□□ -2.12
CD44-234ENST00000531873 TEX30Q5JUR7 227 aa1.79□□□□□ -2.12
CD44-234ENST00000531873 NANOGP8Q6NSW7 305 aa1.79□□□□□ -2.12
CD44-234ENST00000531873 ZFP1Q6P2D0 407 aa1.79□□□□□ -2.12
CD44-234ENST00000531873 TIFABQ6ZNK6 161 aa1.79□□□□□ -2.12
CD44-234ENST00000531873 MDP1Q86V88 176 aa1.79□□□□□ -2.12
CD44-234ENST00000531873 TMEM25Q86YD3 366 aa1.79□□□□□ -2.12
CD44-234ENST00000531873 SYCE1Q8N0S2 351 aa1.79□□□□□ -2.12
CD44-234ENST00000531873 OR2Y1Q8NGV0 311 aa1.79□□□□□ -2.12
CD44-234ENST00000531873 SYNPRQ8TBG9 265 aa1.79□□□□□ -2.12
CD44-234ENST00000531873 TMEM239Q8WW34 195 aa1.79□□□□□ -2.12
CD44-234ENST00000531873 FRZBQ92765 325 aa1.79□□□□□ -2.12
CD44-234ENST00000531873 Q96MT0 163 aa1.79□□□□□ -2.12
CD44-234ENST00000531873 FOPNLQ96NB1 174 aa1.79□□□□□ -2.12
CD44-234ENST00000531873 RNF5Q99942 180 aa1.79□□□□□ -2.12
CD44-234ENST00000531873 NUDT9Q9BW91 350 aa1.79□□□□□ -2.12
CD44-234ENST00000531873 GOLPH3Q9H4A6 298 aa1.79□□□□□ -2.12
CD44-234ENST00000531873 PRORYQ9H606 182 aa1.79□□□□□ -2.12
CD44-234ENST00000531873 C6orf50Q9HD87 102 aa1.79□□□□□ -2.12
CD44-234ENST00000531873 OR2S2Q9NQN1 319 aa1.79□□□□□ -2.12
CD44-234ENST00000531873 CA10Q9NS85 328 aa1.79□□□□□ -2.12
CD44-234ENST00000531873 SLC7A11Q9UPY5 501 aa1.79□□□□□ -2.12
CD44-234ENST00000531873 AP3M1Q9Y2T2 418 aa1.79□□□□□ -2.12
CD44-234ENST00000531873 RFNGQ9Y644 331 aa1.79□□□□□ -2.12
CD44-234ENST00000531873 AHDC1Q5TGY3 1603 aaPredicted RBP1.79□□□□□ -2.12
CD44-234ENST00000531873 SETD1AO15047 1707 aaKnown RBP1.79□□□□□ -2.12
CD44-234ENST00000531873 LTBP4Q8N2S1 1624 aa1.78□□□□□ -2.12
CD44-234ENST00000531873 IGHV3-49A0A0A0MS15 119 aa1.78□□□□□ -2.12
CD44-234ENST00000531873 hCG_2039718K7EN88 272 aa1.78□□□□□ -2.12
CD44-234ENST00000531873 MYL12BO14950 172 aa1.78□□□□□ -2.12
CD44-234ENST00000531873 ENSAO43768 121 aaKnown RBP1.78□□□□□ -2.12
CD44-234ENST00000531873 NDUFS5O43920 106 aa1.78□□□□□ -2.12
CD44-234ENST00000531873 EIF1BO60739 113 aaKnown RBP1.78□□□□□ -2.12
CD44-234ENST00000531873 SHOX2O60902 331 aaPredicted RBP1.78□□□□□ -2.12
CD44-234ENST00000531873 ZNF324O75467 553 aaPredicted RBP1.78□□□□□ -2.12
CD44-234ENST00000531873 VAMP5O95183 116 aa1.78□□□□□ -2.12
CD44-234ENST00000531873 HLA-DQB1P01920 261 aa1.78□□□□□ -2.12
CD44-234ENST00000531873 MRPL3P09001 348 aaKnown RBP1.78□□□□□ -2.12
CD44-234ENST00000531873 ZNF688P0C7X2 276 aa1.78□□□□□ -2.12
CD44-234ENST00000531873 IL3RAP26951 378 aa1.78□□□□□ -2.12
CD44-234ENST00000531873 PSMB5P28074 263 aa1.78□□□□□ -2.12
CD44-234ENST00000531873 PCK1P35558 622 aa1.78□□□□□ -2.12
CD44-234ENST00000531873 SPAM1P38567 509 aa1.78□□□□□ -2.12
CD44-234ENST00000531873 EIF1P41567 113 aaKnown RBP1.78□□□□□ -2.12
CD44-234ENST00000531873 RANBP1P43487 201 aa1.78□□□□□ -2.12
CD44-234ENST00000531873 DNASE1L1P49184 302 aa1.78□□□□□ -2.12
CD44-234ENST00000531873 OR2B6P58173 313 aa1.78□□□□□ -2.12
CD44-234ENST00000531873 UBE2KP61086 200 aa1.78□□□□□ -2.12
CD44-234ENST00000531873 ELF3P78545 371 aaPredicted RBP1.78□□□□□ -2.12
CD44-234ENST00000531873 IL5RAQ01344 420 aa1.78□□□□□ -2.12
CD44-234ENST00000531873 CEACAM16Q2WEN9 425 aa1.78□□□□□ -2.12
CD44-234ENST00000531873 TTC32Q5I0X7 151 aa1.78□□□□□ -2.12
CD44-234ENST00000531873 MFSD14CQ5VZR4 134 aa1.78□□□□□ -2.12
CD44-234ENST00000531873 RESP18Q5W5W9 173 aa1.78□□□□□ -2.12
CD44-234ENST00000531873 GUSBP11Q6P575 273 aa1.78□□□□□ -2.12
CD44-234ENST00000531873 Q6ZSR6 202 aa1.78□□□□□ -2.12
CD44-234ENST00000531873 Q6ZT83 130 aa1.78□□□□□ -2.12
CD44-234ENST00000531873 UBALD2Q8IYN6 164 aa1.78□□□□□ -2.12
CD44-234ENST00000531873 ZNF101Q8IZC7 436 aa1.78□□□□□ -2.12
CD44-234ENST00000531873 SELENOHQ8IZQ5 122 aaKnown RBP1.78□□□□□ -2.12
CD44-234ENST00000531873 LRRC52Q8N7C0 313 aa1.78□□□□□ -2.12
CD44-234ENST00000531873 OR5T1Q8NG75 326 aa1.78□□□□□ -2.12
CD44-234ENST00000531873 OR2M7Q8NG81 312 aa1.78□□□□□ -2.12
CD44-234ENST00000531873 OR1S1Q8NH92 325 aa1.78□□□□□ -2.12
CD44-234ENST00000531873 SFXN5Q8TD22 340 aa1.78□□□□□ -2.12
CD44-234ENST00000531873 DOK4Q8TEW6 326 aa1.78□□□□□ -2.12
CD44-234ENST00000531873 OR5P2Q8WZ92 322 aa1.78□□□□□ -2.12
CD44-234ENST00000531873 TNFRSF14Q92956 283 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms