RNA–Protein interactions for RNA: ENST00000530290.5

CTSB-216, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-216ENST00000530290 NMNAT3Q96T66 252 aa4.48□□□□□ -1.69
CTSB-216ENST00000530290 P2RX4Q99571 388 aa4.48□□□□□ -1.69
CTSB-216ENST00000530290 ZNF649Q9BS31 505 aa4.48□□□□□ -1.69
CTSB-216ENST00000530290 WDR13Q9H1Z4 485 aa4.48□□□□□ -1.69
CTSB-216ENST00000530290 DCLRE1BQ9H816 532 aa4.48□□□□□ -1.69
CTSB-216ENST00000530290 ZMAT4Q9H898 229 aa4.48□□□□□ -1.69
CTSB-216ENST00000530290 SRA1Q9HD15 236 aaKnown RBP4.48□□□□□ -1.69
CTSB-216ENST00000530290 C19orf12Q9NSK7 152 aa4.48□□□□□ -1.69
CTSB-216ENST00000530290 SNTG1Q9NSN8 517 aa4.48□□□□□ -1.69
CTSB-216ENST00000530290 GID8Q9NWU2 228 aa4.48□□□□□ -1.69
CTSB-216ENST00000530290 MRPL22Q9NWU5 206 aaKnown RBP4.48□□□□□ -1.69
CTSB-216ENST00000530290 GAR1Q9NY12 217 aaKnown RBP4.48□□□□□ -1.69
CTSB-216ENST00000530290 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.48□□□□□ -1.69
CTSB-216ENST00000530290 SMAD5-AS1Q9Y6J3 95 aa4.48□□□□□ -1.69
CTSB-216ENST00000530290 ENPP4Q9Y6X5 453 aa4.48□□□□□ -1.69
CTSB-216ENST00000530290 COMMD3-BMI1R4GMX3 469 aa4.48□□□□□ -1.69
CTSB-216ENST00000530290 ALMS1Q8TCU4 4167 aa4.48□□□□□ -1.69
CTSB-216ENST00000530290 OR6C68A6NDL8 312 aa4.47□□□□□ -1.69
CTSB-216ENST00000530290 OOSP1A8MZH6 123 aa4.47□□□□□ -1.69
CTSB-216ENST00000530290 TBX1O43435 398 aa4.47□□□□□ -1.69
CTSB-216ENST00000530290 SPARCP09486 303 aa4.47□□□□□ -1.69
CTSB-216ENST00000530290 ZNF728P0DKX0 622 aa4.47□□□□□ -1.69
CTSB-216ENST00000530290 HTR1DP28221 377 aa4.47□□□□□ -1.69
CTSB-216ENST00000530290 FMO3P31513 532 aa4.47□□□□□ -1.69
CTSB-216ENST00000530290 PRKXP51817 358 aa4.47□□□□□ -1.69
CTSB-216ENST00000530290 FXYD6P3P58550 94 aa4.47□□□□□ -1.69
CTSB-216ENST00000530290 MAGOHP61326 146 aaKnown RBP4.47□□□□□ -1.69
CTSB-216ENST00000530290 BLCAPP62952 87 aa4.47□□□□□ -1.69
CTSB-216ENST00000530290 MEF2CQ06413 473 aaPredicted RBP4.47□□□□□ -1.69
CTSB-216ENST00000530290 SLC34A1Q06495 639 aa4.47□□□□□ -1.69
CTSB-216ENST00000530290 PRDX4Q13162 271 aa4.47□□□□□ -1.69
CTSB-216ENST00000530290 EIF2B1Q14232 305 aaKnown RBP4.47□□□□□ -1.69
CTSB-216ENST00000530290 KRT72Q14CN4 511 aa4.47□□□□□ -1.69
CTSB-216ENST00000530290 SEC23BQ15437 767 aa4.47□□□□□ -1.69
CTSB-216ENST00000530290 TMEM95Q3KNT9 176 aa4.47□□□□□ -1.69
CTSB-216ENST00000530290 OTPQ5XKR4 325 aa4.47□□□□□ -1.69
CTSB-216ENST00000530290 TMEM200BQ69YZ2 307 aa4.47□□□□□ -1.69
CTSB-216ENST00000530290 ACP7Q6ZNF0 438 aa4.47□□□□□ -1.69
CTSB-216ENST00000530290 FKBP9P1Q75LS8 142 aa4.47□□□□□ -1.69
CTSB-216ENST00000530290 CBLL1Q75N03 491 aa4.47□□□□□ -1.69
CTSB-216ENST00000530290 MEPCEQ7L2J0 689 aaKnown RBP4.47□□□□□ -1.69
CTSB-216ENST00000530290 OR2W3Q7Z3T1 314 aa4.47□□□□□ -1.69
CTSB-216ENST00000530290 LHFPL4Q7Z7J7 247 aa4.47□□□□□ -1.69
CTSB-216ENST00000530290 RTN4RL2Q86UN3 420 aa4.47□□□□□ -1.69
CTSB-216ENST00000530290 POC1AQ8NBT0 407 aa4.47□□□□□ -1.69
CTSB-216ENST00000530290 OR2T27Q8NH04 317 aa4.47□□□□□ -1.69
CTSB-216ENST00000530290 OR8U1Q8NH10 309 aa4.47□□□□□ -1.69
CTSB-216ENST00000530290 OR4K13Q8NH42 304 aa4.47□□□□□ -1.69
CTSB-216ENST00000530290 NDNFQ8TB73 568 aa4.47□□□□□ -1.69
CTSB-216ENST00000530290 ZNF596Q8TC21 504 aa4.47□□□□□ -1.69
CTSB-216ENST00000530290 HPSE2Q8WWQ2 592 aa4.47□□□□□ -1.69
CTSB-216ENST00000530290 RPL3LQ92901 407 aaKnown RBP4.47□□□□□ -1.69
CTSB-216ENST00000530290 RNF170Q96K19 258 aa4.47□□□□□ -1.69
CTSB-216ENST00000530290 ZNF714Q96N38 554 aa4.47□□□□□ -1.69
CTSB-216ENST00000530290 SLC25A33Q9BSK2 321 aa4.47□□□□□ -1.69
CTSB-216ENST00000530290 IFT27Q9BW83 186 aa4.47□□□□□ -1.69
CTSB-216ENST00000530290 GON7Q9BXV9 100 aa4.47□□□□□ -1.69
CTSB-216ENST00000530290 NSRP1Q9H0G5 558 aaKnown RBP4.47□□□□□ -1.69
CTSB-216ENST00000530290 OR52D1Q9H346 318 aa4.47□□□□□ -1.69
CTSB-216ENST00000530290 NIPAL2Q9H841 368 aa4.47□□□□□ -1.69
CTSB-216ENST00000530290 PCDHB16Q9NRJ7 776 aa4.47□□□□□ -1.69
CTSB-216ENST00000530290 DCAF13Q9NV06 445 aaKnown RBP4.47□□□□□ -1.69
CTSB-216ENST00000530290 VNN3Q9NY84 501 aa4.47□□□□□ -1.69
CTSB-216ENST00000530290 RHBDD3Q9Y3P4 386 aa4.47□□□□□ -1.69
CTSB-216ENST00000530290 PLECQ15149 4684 aaKnown RBP4.47□□□□□ -1.69
CTSB-216ENST00000530290 hADV38S2A0JD32 116 aa4.46□□□□□ -1.7
CTSB-216ENST00000530290 RFPL4AA6NLU0 287 aa4.46□□□□□ -1.7
CTSB-216ENST00000530290 NUDT19A8MXV4 375 aa4.46□□□□□ -1.7
CTSB-216ENST00000530290 RFPL4AL1F8VTS6 287 aa4.46□□□□□ -1.7
CTSB-216ENST00000530290 J3KTA2 159 aa4.46□□□□□ -1.7
CTSB-216ENST00000530290 MRASO14807 208 aa4.46□□□□□ -1.7
CTSB-216ENST00000530290 NOS1APO75052 506 aaPredicted RBP4.46□□□□□ -1.7
CTSB-216ENST00000530290 ZNF682O95780 498 aa4.46□□□□□ -1.7
CTSB-216ENST00000530290 TK1P04183 234 aa4.46□□□□□ -1.7
CTSB-216ENST00000530290 LPLP06858 475 aa4.46□□□□□ -1.7
CTSB-216ENST00000530290 CCDC159P0C7I6 412 aa4.46□□□□□ -1.7
CTSB-216ENST00000530290 SLC2A1P11166 492 aa4.46□□□□□ -1.7
CTSB-216ENST00000530290 CEACAM3P40198 252 aa4.46□□□□□ -1.7
CTSB-216ENST00000530290 MNDAP41218 407 aa4.46□□□□□ -1.7
CTSB-216ENST00000530290 YAP1P46937 504 aaKnown RBP4.46□□□□□ -1.7
CTSB-216ENST00000530290 OR3A4PP47883 348 aa4.46□□□□□ -1.7
CTSB-216ENST00000530290 VEGFCP49767 419 aa4.46□□□□□ -1.7
CTSB-216ENST00000530290 DLX6P56179 175 aa4.46□□□□□ -1.7
CTSB-216ENST00000530290 ZNF121P58317 390 aaPredicted RBP4.46□□□□□ -1.7
CTSB-216ENST00000530290 ELF3P78545 371 aaPredicted RBP4.46□□□□□ -1.7
CTSB-216ENST00000530290 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.46□□□□□ -1.7
CTSB-216ENST00000530290 DYNC1I2Q13409 638 aaKnown RBP4.46□□□□□ -1.7
CTSB-216ENST00000530290 ZNF273Q14593 569 aa4.46□□□□□ -1.7
CTSB-216ENST00000530290 SNAPC1Q16533 368 aa4.46□□□□□ -1.7
CTSB-216ENST00000530290 CEACAM21Q3KPI0 293 aa4.46□□□□□ -1.7
CTSB-216ENST00000530290 ABCA11PQ4W5N1 156 aa4.46□□□□□ -1.7
CTSB-216ENST00000530290 PLA1AQ53H76 456 aa4.46□□□□□ -1.7
CTSB-216ENST00000530290 OR52W1Q6IF63 320 aa4.46□□□□□ -1.7
CTSB-216ENST00000530290 TBPL2Q6SJ96 375 aa4.46□□□□□ -1.7
CTSB-216ENST00000530290 ZNF782Q6ZMW2 699 aaPredicted RBP4.46□□□□□ -1.7
CTSB-216ENST00000530290 SHFQ7M4L6 423 aa4.46□□□□□ -1.7
CTSB-216ENST00000530290 PRSS45Q7RTY3 260 aa4.46□□□□□ -1.7
CTSB-216ENST00000530290 VTCN1Q7Z7D3 282 aa4.46□□□□□ -1.7
CTSB-216ENST00000530290 ZNF573Q86YE8 665 aa4.46□□□□□ -1.7
CTSB-216ENST00000530290 TIGD4Q8IY51 512 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms