RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 C16orf87Q6PH81 154 aa7.04□□□□□ -1.28
SSBP3-212ENST00000528930 DEGS2Q6QHC5 323 aa7.04□□□□□ -1.28
SSBP3-212ENST00000528930 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.04□□□□□ -1.28
SSBP3-212ENST00000528930 CLVS1Q8IUQ0 354 aaPredicted RBP7.04□□□□□ -1.28
SSBP3-212ENST00000528930 C11orf53Q8IXP5 236 aa7.04□□□□□ -1.28
SSBP3-212ENST00000528930 KLHL36Q8N4N3 616 aa7.04□□□□□ -1.28
SSBP3-212ENST00000528930 SPICQ8N5J4 248 aa7.04□□□□□ -1.28
SSBP3-212ENST00000528930 OR8B12Q8NGG6 310 aa7.04□□□□□ -1.28
SSBP3-212ENST00000528930 OR13F1Q8NGS4 319 aa7.04□□□□□ -1.28
SSBP3-212ENST00000528930 MISP3Q96FF7 219 aa7.04□□□□□ -1.28
SSBP3-212ENST00000528930 FAHD2AQ96GK7 314 aa7.04□□□□□ -1.28
SSBP3-212ENST00000528930 PGAM5Q96HS1 289 aa7.04□□□□□ -1.28
SSBP3-212ENST00000528930 LYZL4Q96KX0 146 aa7.04□□□□□ -1.28
SSBP3-212ENST00000528930 RDH12Q96NR8 316 aa7.04□□□□□ -1.28
SSBP3-212ENST00000528930 IL4I1Q96RQ9 567 aa7.04□□□□□ -1.28
SSBP3-212ENST00000528930 ADAT1Q9BUB4 502 aaKnown RBP7.04□□□□□ -1.28
SSBP3-212ENST00000528930 C9orf16Q9BUW7 83 aa7.04□□□□□ -1.28
SSBP3-212ENST00000528930 PRRG3Q9BZD7 231 aa7.04□□□□□ -1.28
SSBP3-212ENST00000528930 OR10A2Q9H208 303 aa7.04□□□□□ -1.28
SSBP3-212ENST00000528930 PPP1R3EQ9H7J1 279 aa7.04□□□□□ -1.28
SSBP3-212ENST00000528930 NIPAL2Q9H841 368 aa7.04□□□□□ -1.28
SSBP3-212ENST00000528930 ADGRL4Q9HBW9 690 aa7.04□□□□□ -1.28
SSBP3-212ENST00000528930 MMP26Q9NRE1 261 aa7.04□□□□□ -1.28
SSBP3-212ENST00000528930 UFSP2Q9NUQ7 469 aa7.04□□□□□ -1.28
SSBP3-212ENST00000528930 HAO2Q9NYQ3 351 aa7.04□□□□□ -1.28
SSBP3-212ENST00000528930 ENOPH1Q9UHY7 261 aa7.04□□□□□ -1.28
SSBP3-212ENST00000528930 LRP12Q9Y561 859 aa7.04□□□□□ -1.28
SSBP3-212ENST00000528930 hCG_2014768A0A024R1R8 64 aa7.03□□□□□ -1.28
SSBP3-212ENST00000528930 PPIAL4CA0A0B4J2A2 164 aa7.03□□□□□ -1.28
SSBP3-212ENST00000528930 A0A0G2JMP0 313 aa7.03□□□□□ -1.28
SSBP3-212ENST00000528930 A0A0X1KG70 313 aa7.03□□□□□ -1.28
SSBP3-212ENST00000528930 A8MXK9 166 aa7.03□□□□□ -1.28
SSBP3-212ENST00000528930 H3BMQ9 156 aa7.03□□□□□ -1.28
SSBP3-212ENST00000528930 TRAPPC2LH3BP13 241 aa7.03□□□□□ -1.28
SSBP3-212ENST00000528930 BOLA2-SMG1P6H3BVE0 249 aa7.03□□□□□ -1.28
SSBP3-212ENST00000528930 PSMD9O00233 223 aa7.03□□□□□ -1.28
SSBP3-212ENST00000528930 TNFRSF13BO14836 293 aaPredicted RBP7.03□□□□□ -1.28
SSBP3-212ENST00000528930 MAGEB3O15480 346 aa7.03□□□□□ -1.28
SSBP3-212ENST00000528930 MRPS14O60783 128 aaKnown RBP7.03□□□□□ -1.28
SSBP3-212ENST00000528930 SRSF10O75494 262 aaKnown RBP7.03□□□□□ -1.28
SSBP3-212ENST00000528930 FOXH1O75593 365 aa7.03□□□□□ -1.28
SSBP3-212ENST00000528930 IGLV3-1P01715 115 aa7.03□□□□□ -1.28
SSBP3-212ENST00000528930 ALPLP05186 524 aa7.03□□□□□ -1.28
SSBP3-212ENST00000528930 GSTT2P0CG29 244 aa7.03□□□□□ -1.28
SSBP3-212ENST00000528930 GSTT2BP0CG30 244 aa7.03□□□□□ -1.28
SSBP3-212ENST00000528930 CFL1P23528 166 aaKnown RBP7.03□□□□□ -1.28
SSBP3-212ENST00000528930 ACKR3P25106 362 aa7.03□□□□□ -1.28
SSBP3-212ENST00000528930 DCTDP32321 178 aa7.03□□□□□ -1.28
SSBP3-212ENST00000528930 ROM1Q03395 351 aa7.03□□□□□ -1.28
SSBP3-212ENST00000528930 OR8B8Q15620 311 aa7.03□□□□□ -1.28
SSBP3-212ENST00000528930 GFOD2Q3B7J2 385 aa7.03□□□□□ -1.28
SSBP3-212ENST00000528930 ZNF404Q494X3 552 aa7.03□□□□□ -1.28
SSBP3-212ENST00000528930 KCTD18Q6PI47 426 aaPredicted RBP7.03□□□□□ -1.28
SSBP3-212ENST00000528930 ZBTB49Q6ZSB9 765 aa7.03□□□□□ -1.28
SSBP3-212ENST00000528930 KRT77Q7Z794 578 aa7.03□□□□□ -1.28
SSBP3-212ENST00000528930 WDR86Q86TI4 376 aa7.03□□□□□ -1.28
SSBP3-212ENST00000528930 KLBQ86Z14 1044 aa7.03□□□□□ -1.28
SSBP3-212ENST00000528930 ZNF679Q8IYX0 411 aa7.03□□□□□ -1.28
SSBP3-212ENST00000528930 MUC20Q8N307 709 aaPredicted RBP7.03□□□□□ -1.28
SSBP3-212ENST00000528930 TEX29Q8N6K0 151 aa7.03□□□□□ -1.28
SSBP3-212ENST00000528930 SPERTQ8NA61 448 aa7.03□□□□□ -1.28
SSBP3-212ENST00000528930 C19orf18Q8NEA5 215 aa7.03□□□□□ -1.28
SSBP3-212ENST00000528930 OR4M2Q8NGB6 313 aa7.03□□□□□ -1.28
SSBP3-212ENST00000528930 TMIGD2Q96BF3 282 aa7.03□□□□□ -1.28
SSBP3-212ENST00000528930 C1orf147Q96MC9 270 aaPredicted RBP7.03□□□□□ -1.28
SSBP3-212ENST00000528930 OR8B4Q96RC9 309 aa7.03□□□□□ -1.28
SSBP3-212ENST00000528930 CNN2Q99439 309 aaKnown RBP7.03□□□□□ -1.28
SSBP3-212ENST00000528930 TMEM246Q9BRR3 403 aa7.03□□□□□ -1.28
SSBP3-212ENST00000528930 RGCCQ9H4X1 137 aa7.03□□□□□ -1.28
SSBP3-212ENST00000528930 HMG20AQ9NP66 347 aa7.03□□□□□ -1.28
SSBP3-212ENST00000528930 AURKAIP1Q9NWT8 199 aaPredicted RBP7.03□□□□□ -1.28
SSBP3-212ENST00000528930 FAM206AQ9NX38 181 aa7.03□□□□□ -1.28
SSBP3-212ENST00000528930 USE1Q9NZ43 259 aa7.03□□□□□ -1.28
SSBP3-212ENST00000528930 H2AFY2Q9P0M6 372 aaPredicted RBP7.03□□□□□ -1.28
SSBP3-212ENST00000528930 RNF7Q9UBF6 113 aa7.03□□□□□ -1.28
SSBP3-212ENST00000528930 OPN4Q9UHM6 478 aa7.03□□□□□ -1.28
SSBP3-212ENST00000528930 NOP16Q9Y3C1 178 aaKnown RBP7.03□□□□□ -1.28
SSBP3-212ENST00000528930 RHBDD3Q9Y3P4 386 aa7.03□□□□□ -1.28
SSBP3-212ENST00000528930 STAB2Q8WWQ8 2551 aa7.02□□□□□ -1.29
SSBP3-212ENST00000528930 TET2Q6N021 2002 aaPredicted RBP7.02□□□□□ -1.29
SSBP3-212ENST00000528930 LOC105371242A0A075B767 164 aa7.02□□□□□ -1.29
SSBP3-212ENST00000528930 TMEM269A0A1B0GVZ9 245 aa7.02□□□□□ -1.29
SSBP3-212ENST00000528930 DNAJC9-AS1A6NH13 148 aa7.02□□□□□ -1.29
SSBP3-212ENST00000528930 ACOD1A6NK06 481 aa7.02□□□□□ -1.29
SSBP3-212ENST00000528930 LRRC30A6NM36 301 aa7.02□□□□□ -1.29
SSBP3-212ENST00000528930 ANKRD30BLA7E2S9 258 aa7.02□□□□□ -1.29
SSBP3-212ENST00000528930 J3QLI3 93 aa7.02□□□□□ -1.29
SSBP3-212ENST00000528930 EI24O14681 340 aa7.02□□□□□ -1.29
SSBP3-212ENST00000528930 MAGEB4O15481 346 aaPredicted RBP7.02□□□□□ -1.29
SSBP3-212ENST00000528930 ZNF254O75437 659 aa7.02□□□□□ -1.29
SSBP3-212ENST00000528930 LHBP01229 141 aa7.02□□□□□ -1.29
SSBP3-212ENST00000528930 GRPP07492 148 aa7.02□□□□□ -1.29
SSBP3-212ENST00000528930 GATA3P23771 443 aa7.02□□□□□ -1.29
SSBP3-212ENST00000528930 CPT2P23786 658 aa7.02□□□□□ -1.29
SSBP3-212ENST00000528930 PSMB10P40306 273 aa7.02□□□□□ -1.29
SSBP3-212ENST00000528930 ARPC4P59998 168 aa7.02□□□□□ -1.29
SSBP3-212ENST00000528930 CXCR4P61073 352 aa7.02□□□□□ -1.29
SSBP3-212ENST00000528930 PAX2Q02962 417 aa7.02□□□□□ -1.29
SSBP3-212ENST00000528930 MLANAQ16655 118 aa7.02□□□□□ -1.29
SSBP3-212ENST00000528930 DCAF12L2Q5VW00 463 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms