RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 TECTBQ96PL2 329 aa10.25□□□□□ -0.77
USF1-208ENST00000528768 CHST5Q9GZS9 411 aa10.25□□□□□ -0.77
USF1-208ENST00000528768 RNF122Q9H9V4 155 aa10.25□□□□□ -0.77
USF1-208ENST00000528768 GPR35Q9HC97 309 aa10.25□□□□□ -0.77
USF1-208ENST00000528768 DEPPQ9NTK1 212 aa10.25□□□□□ -0.77
USF1-208ENST00000528768 MYEF2Q9P2K5 600 aaKnown RBP10.25□□□□□ -0.77
USF1-208ENST00000528768 EIF3KQ9UBQ5 218 aaKnown RBP10.25□□□□□ -0.77
USF1-208ENST00000528768 ATPIF1Q9UII2 106 aa10.25□□□□□ -0.77
USF1-208ENST00000528768 PIGLQ9Y2B2 252 aa10.25□□□□□ -0.77
USF1-208ENST00000528768 RHBDD3Q9Y3P4 386 aa10.25□□□□□ -0.77
USF1-208ENST00000528768 CNTRLQ7Z7A1 2325 aa10.24□□□□□ -0.77
USF1-208ENST00000528768 CACNA1CQ13936 2221 aa10.24□□□□□ -0.77
USF1-208ENST00000528768 IGKV3D-15A0A087WSY6 115 aa10.24□□□□□ -0.77
USF1-208ENST00000528768 TRGV8A0A0C4DH27 118 aa10.24□□□□□ -0.77
USF1-208ENST00000528768 CDC14BO60729 498 aa10.24□□□□□ -0.77
USF1-208ENST00000528768 NEURL1O76050 574 aa10.24□□□□□ -0.77
USF1-208ENST00000528768 ACTL6AO96019 429 aa10.24□□□□□ -0.77
USF1-208ENST00000528768 IFNA7P01567 189 aa10.24□□□□□ -0.77
USF1-208ENST00000528768 LCATP04180 440 aa10.24□□□□□ -0.77
USF1-208ENST00000528768 TPOP07202 933 aa10.24□□□□□ -0.77
USF1-208ENST00000528768 PTGFRP43088 359 aa10.24□□□□□ -0.77
USF1-208ENST00000528768 CA7P43166 264 aa10.24□□□□□ -0.77
USF1-208ENST00000528768 HTR5AP47898 357 aa10.24□□□□□ -0.77
USF1-208ENST00000528768 STARP49675 285 aa10.24□□□□□ -0.77
USF1-208ENST00000528768 TAS2R31P59538 309 aa10.24□□□□□ -0.77
USF1-208ENST00000528768 TSPAN5P62079 268 aa10.24□□□□□ -0.77
USF1-208ENST00000528768 FOXO1Q12778 655 aa10.24□□□□□ -0.77
USF1-208ENST00000528768 UNC119Q13432 240 aa10.24□□□□□ -0.77
USF1-208ENST00000528768 GK2Q14410 553 aaPredicted RBP10.24□□□□□ -0.77
USF1-208ENST00000528768 KISS1Q15726 138 aa10.24□□□□□ -0.77
USF1-208ENST00000528768 CEACAM16Q2WEN9 425 aa10.24□□□□□ -0.77
USF1-208ENST00000528768 LPCAT3Q6P1A2 487 aa10.24□□□□□ -0.77
USF1-208ENST00000528768 C11orf88Q6PI97 169 aa10.24□□□□□ -0.77
USF1-208ENST00000528768 GFRALQ6UXV0 394 aa10.24□□□□□ -0.77
USF1-208ENST00000528768 BIVMQ86UB2 503 aa10.24□□□□□ -0.77
USF1-208ENST00000528768 NAA40Q86UY6 237 aa10.24□□□□□ -0.77
USF1-208ENST00000528768 PAQR4Q8N4S7 273 aaPredicted RBP10.24□□□□□ -0.77
USF1-208ENST00000528768 OR8H1Q8NGG4 311 aa10.24□□□□□ -0.77
USF1-208ENST00000528768 OR51T1Q8NGJ9 327 aa10.24□□□□□ -0.77
USF1-208ENST00000528768 SNAPC3Q92966 411 aa10.24□□□□□ -0.77
USF1-208ENST00000528768 DVL3Q92997 716 aaPredicted RBP10.24□□□□□ -0.77
USF1-208ENST00000528768 FBXO17Q96EF6 278 aa10.24□□□□□ -0.77
USF1-208ENST00000528768 TMUB1Q9BVT8 246 aa10.24□□□□□ -0.77
USF1-208ENST00000528768 CHIAQ9BZP6 476 aa10.24□□□□□ -0.77
USF1-208ENST00000528768 SELENOIQ9C0D9 397 aa10.24□□□□□ -0.77
USF1-208ENST00000528768 ZNF703Q9H7S9 590 aaPredicted RBP10.24□□□□□ -0.77
USF1-208ENST00000528768 ALPK2Q86TB3 2170 aa10.24□□□□□ -0.77
USF1-208ENST00000528768 DNHD1Q96M86 4753 aa10.23□□□□□ -0.77
USF1-208ENST00000528768 F5H5P2 479 aa10.23□□□□□ -0.77
USF1-208ENST00000528768 H3BUI4 141 aa10.23□□□□□ -0.77
USF1-208ENST00000528768 XRCC2O43543 280 aa10.23□□□□□ -0.77
USF1-208ENST00000528768 SYNGR3O43761 229 aa10.23□□□□□ -0.77
USF1-208ENST00000528768 TSC22D2O75157 780 aa10.23□□□□□ -0.77
USF1-208ENST00000528768 CA11O75493 328 aa10.23□□□□□ -0.77
USF1-208ENST00000528768 OR2A4O95047 310 aa10.23□□□□□ -0.77
USF1-208ENST00000528768 SP1P08047 785 aa10.23□□□□□ -0.77
USF1-208ENST00000528768 FCGR2AP12318 317 aa10.23□□□□□ -0.77
USF1-208ENST00000528768 HIST1H1DP16402 221 aaKnown RBP10.23□□□□□ -0.77
USF1-208ENST00000528768 CRYGSP22914 178 aa10.23□□□□□ -0.77
USF1-208ENST00000528768 CPT2P23786 658 aa10.23□□□□□ -0.77
USF1-208ENST00000528768 OR3A4PP47883 348 aa10.23□□□□□ -0.77
USF1-208ENST00000528768 TDGF1P3P51864 188 aa10.23□□□□□ -0.77
USF1-208ENST00000528768 TLE4Q04727 773 aa10.23□□□□□ -0.77
USF1-208ENST00000528768 FGL1Q08830 312 aa10.23□□□□□ -0.77
USF1-208ENST00000528768 ARFRP1Q13795 201 aa10.23□□□□□ -0.77
USF1-208ENST00000528768 RNPS1Q15287 305 aaKnown RBP10.23□□□□□ -0.77
USF1-208ENST00000528768 MOGAT2Q3SYC2 334 aa10.23□□□□□ -0.77
USF1-208ENST00000528768 SCGB2B2Q4G0G5 96 aa10.23□□□□□ -0.77
USF1-208ENST00000528768 FAHD2BQ6P2I3 314 aaPredicted RBP10.23□□□□□ -0.77
USF1-208ENST00000528768 DPPA2Q7Z7J5 298 aa10.23□□□□□ -0.77
USF1-208ENST00000528768 SULF2Q8IWU5 870 aa10.23□□□□□ -0.77
USF1-208ENST00000528768 SLC7A5P1Q8MH63 180 aa10.23□□□□□ -0.77
USF1-208ENST00000528768 C12orf45Q8N5I9 185 aaPredicted RBP10.23□□□□□ -0.77
USF1-208ENST00000528768 OR2AK2Q8NG84 335 aa10.23□□□□□ -0.77
USF1-208ENST00000528768 HAS2Q92819 552 aa10.23□□□□□ -0.77
USF1-208ENST00000528768 FAHD2AQ96GK7 314 aa10.23□□□□□ -0.77
USF1-208ENST00000528768 REEP6Q96HR9 211 aa10.23□□□□□ -0.77
USF1-208ENST00000528768 OR2A7Q96R45 310 aa10.23□□□□□ -0.77
USF1-208ENST00000528768 TMPRSS13Q9BYE2 586 aa10.23□□□□□ -0.77
USF1-208ENST00000528768 METTL9Q9H1A3 318 aa10.23□□□□□ -0.77
USF1-208ENST00000528768 LPAR5Q9H1C0 372 aa10.23□□□□□ -0.77
USF1-208ENST00000528768 POFUT1Q9H488 388 aa10.23□□□□□ -0.77
USF1-208ENST00000528768 ZNF319Q9P2F9 582 aa10.23□□□□□ -0.77
USF1-208ENST00000528768 SLC7A11Q9UPY5 501 aa10.23□□□□□ -0.77
USF1-208ENST00000528768 PINLYPA6NC86 204 aa10.22□□□□□ -0.77
USF1-208ENST00000528768 ZNF724A8MTY0 619 aa10.22□□□□□ -0.77
USF1-208ENST00000528768 SERPINE3A8MV23 424 aa10.22□□□□□ -0.77
USF1-208ENST00000528768 ZNF587BE7ETH6 402 aa10.22□□□□□ -0.77
USF1-208ENST00000528768 M0QYG6 137 aa10.22□□□□□ -0.77
USF1-208ENST00000528768 AKR7A2O43488 359 aa10.22□□□□□ -0.77
USF1-208ENST00000528768 NME2P1O60361 137 aa10.22□□□□□ -0.77
USF1-208ENST00000528768 CLDN14O95500 239 aa10.22□□□□□ -0.77
USF1-208ENST00000528768 CRYABP02511 175 aaKnown RBP10.22□□□□□ -0.77
USF1-208ENST00000528768 FCER2P06734 321 aa10.22□□□□□ -0.77
USF1-208ENST00000528768 OR4E1P0C645 316 aa10.22□□□□□ -0.77
USF1-208ENST00000528768 VSIG10L2P0DP72 767 aa10.22□□□□□ -0.77
USF1-208ENST00000528768 ZNF32P17041 273 aa10.22□□□□□ -0.77
USF1-208ENST00000528768 NME2P22392 152 aa10.22□□□□□ -0.77
USF1-208ENST00000528768 ZNF81P51508 661 aa10.22□□□□□ -0.77
USF1-208ENST00000528768 TAS2R46P59540 309 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms