RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 PADI1Q9ULC6 663 aa12.9□□□□□ -0.34
CAPN1-214ENST00000528165 KCNIP3Q9Y2W7 256 aa12.9□□□□□ -0.34
CAPN1-214ENST00000528165 PCNX3Q9H6A9 2034 aa12.9□□□□□ -0.34
CAPN1-214ENST00000528165 SERPINE3A8MV23 424 aa12.89□□□□□ -0.35
CAPN1-214ENST00000528165 ZNF587BE7ETH6 402 aa12.89□□□□□ -0.35
CAPN1-214ENST00000528165 TSPAN2O60636 221 aa12.89□□□□□ -0.35
CAPN1-214ENST00000528165 IGKV3-11P04433 115 aa12.89□□□□□ -0.35
CAPN1-214ENST00000528165 SELLP14151 372 aa12.89□□□□□ -0.35
CAPN1-214ENST00000528165 HOXB2P14652 356 aa12.89□□□□□ -0.35
CAPN1-214ENST00000528165 CEBPGP53567 150 aa12.89□□□□□ -0.35
CAPN1-214ENST00000528165 UBE2KP61086 200 aa12.89□□□□□ -0.35
CAPN1-214ENST00000528165 DCAF7P61962 342 aa12.89□□□□□ -0.35
CAPN1-214ENST00000528165 TLE3Q04726 772 aa12.89□□□□□ -0.35
CAPN1-214ENST00000528165 ZP4Q12836 540 aa12.89□□□□□ -0.35
CAPN1-214ENST00000528165 RSU1Q15404 277 aa12.89□□□□□ -0.35
CAPN1-214ENST00000528165 OR8B12Q8NGG6 310 aa12.89□□□□□ -0.35
CAPN1-214ENST00000528165 OR2AJ1Q8NGZ0 328 aa12.89□□□□□ -0.35
CAPN1-214ENST00000528165 ZNF721Q8TF20 911 aa12.89□□□□□ -0.35
CAPN1-214ENST00000528165 Q8WTZ3 238 aa12.89□□□□□ -0.35
CAPN1-214ENST00000528165 TSLPQ969D9 159 aa12.89□□□□□ -0.35
CAPN1-214ENST00000528165 SHDQ96IW2 340 aa12.89□□□□□ -0.35
CAPN1-214ENST00000528165 JSRP1Q96MG2 331 aaPredicted RBP12.89□□□□□ -0.35
CAPN1-214ENST00000528165 GAS2L1Q99501 681 aaPredicted RBP12.89□□□□□ -0.35
CAPN1-214ENST00000528165 EMC6Q9BV81 110 aa12.89□□□□□ -0.35
CAPN1-214ENST00000528165 URGCP-MRPS24S4R325 110 aa12.89□□□□□ -0.35
CAPN1-214ENST00000528165 H0YIG0 161 aa12.89□□□□□ -0.35
CAPN1-214ENST00000528165 APOBEC1P41238 236 aaKnown RBP12.89□□□□□ -0.35
CAPN1-214ENST00000528165 NKX6-1P78426 367 aaPredicted RBP12.89□□□□□ -0.35
CAPN1-214ENST00000528165 HIKESHIQ53FT3 197 aa12.89□□□□□ -0.35
CAPN1-214ENST00000528165 DMRTC1Q5HYR2 192 aa12.89□□□□□ -0.35
CAPN1-214ENST00000528165 COL13A1Q5TAT6 717 aaPredicted RBP12.89□□□□□ -0.35
CAPN1-214ENST00000528165 SPNS3Q6ZMD2 512 aa12.89□□□□□ -0.35
CAPN1-214ENST00000528165 NTNG2Q96CW9 530 aa12.89□□□□□ -0.35
CAPN1-214ENST00000528165 MEGF10Q96KG7 1140 aa12.89□□□□□ -0.35
CAPN1-214ENST00000528165 HIST1H2BKO60814 126 aa12.89□□□□□ -0.35
CAPN1-214ENST00000528165 DDAH2O95865 285 aa12.89□□□□□ -0.35
CAPN1-214ENST00000528165 HIST1H2BJP06899 126 aa12.89□□□□□ -0.35
CAPN1-214ENST00000528165 HEXBP07686 556 aa12.89□□□□□ -0.35
CAPN1-214ENST00000528165 CD63P08962 238 aa12.89□□□□□ -0.35
CAPN1-214ENST00000528165 CCL5P13501 91 aa12.89□□□□□ -0.35
CAPN1-214ENST00000528165 HIST1H2BOP23527 126 aa12.89□□□□□ -0.35
CAPN1-214ENST00000528165 HIST1H2BBP33778 126 aa12.89□□□□□ -0.35
CAPN1-214ENST00000528165 ZNF121P58317 390 aaPredicted RBP12.89□□□□□ -0.35
CAPN1-214ENST00000528165 HIST1H2BDP58876 126 aa12.89□□□□□ -0.35
CAPN1-214ENST00000528165 YPEL5P62699 121 aa12.89□□□□□ -0.35
CAPN1-214ENST00000528165 HIST1H2BCP62807 126 aa12.89□□□□□ -0.35
CAPN1-214ENST00000528165 ELOBQ15370 118 aa12.89□□□□□ -0.35
CAPN1-214ENST00000528165 HIST2H2BEQ16778 126 aa12.89□□□□□ -0.35
CAPN1-214ENST00000528165 SP6Q3SY56 376 aa12.89□□□□□ -0.35
CAPN1-214ENST00000528165 PDZD11Q5EBL8 140 aa12.89□□□□□ -0.35
CAPN1-214ENST00000528165 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.89□□□□□ -0.35
CAPN1-214ENST00000528165 ZNF343Q6P1L6 599 aa12.89□□□□□ -0.35
CAPN1-214ENST00000528165 APCDD1LQ8NCL9 501 aa12.89□□□□□ -0.35
CAPN1-214ENST00000528165 HPSE2Q8WWQ2 592 aa12.89□□□□□ -0.35
CAPN1-214ENST00000528165 HIST1H2BHQ93079 126 aa12.89□□□□□ -0.35
CAPN1-214ENST00000528165 TCTN2Q96GX1 697 aa12.89□□□□□ -0.35
CAPN1-214ENST00000528165 HIST1H2BNQ99877 126 aa12.89□□□□□ -0.35
CAPN1-214ENST00000528165 HIST1H2BMQ99879 126 aa12.89□□□□□ -0.35
CAPN1-214ENST00000528165 IGKV1D-8A0A087WSZ0 117 aa12.88□□□□□ -0.35
CAPN1-214ENST00000528165 A0A1W2PQF6 199 aa12.88□□□□□ -0.35
CAPN1-214ENST00000528165 CXorf65A6NEN9 183 aa12.88□□□□□ -0.35
CAPN1-214ENST00000528165 RBFOX3A6NFN3 312 aa12.88□□□□□ -0.35
CAPN1-214ENST00000528165 K7N7A8 449 aa12.88□□□□□ -0.35
CAPN1-214ENST00000528165 CXCL1P09341 107 aa12.88□□□□□ -0.35
CAPN1-214ENST00000528165 BIDP55957 195 aa12.88□□□□□ -0.35
CAPN1-214ENST00000528165 PIGPP57054 158 aa12.88□□□□□ -0.35
CAPN1-214ENST00000528165 NHLH2Q02577 135 aa12.88□□□□□ -0.35
CAPN1-214ENST00000528165 UBE2V2Q15819 145 aa12.88□□□□□ -0.35
CAPN1-214ENST00000528165 TMEM31Q5JXX7 168 aa12.88□□□□□ -0.35
CAPN1-214ENST00000528165 REC114Q7Z4M0 266 aa12.88□□□□□ -0.35
CAPN1-214ENST00000528165 RNASE11Q8TAA1 199 aaKnown RBP12.88□□□□□ -0.35
CAPN1-214ENST00000528165 CPNE4Q96A23 557 aaPredicted RBP12.88□□□□□ -0.35
CAPN1-214ENST00000528165 A0A087WWC5 75 aa12.88□□□□□ -0.35
CAPN1-214ENST00000528165 NSG1A0A0A6YYJ2 146 aa12.88□□□□□ -0.35
CAPN1-214ENST00000528165 TLCD2A6NGC4 264 aa12.88□□□□□ -0.35
CAPN1-214ENST00000528165 TSTD3H0UI37 97 aa12.88□□□□□ -0.35
CAPN1-214ENST00000528165 AKT2P31751 481 aa12.88□□□□□ -0.35
CAPN1-214ENST00000528165 TNFRSF4P43489 277 aa12.88□□□□□ -0.35
CAPN1-214ENST00000528165 PPM1FP49593 454 aaPredicted RBP12.88□□□□□ -0.35
CAPN1-214ENST00000528165 GAMTQ14353 236 aa12.88□□□□□ -0.35
CAPN1-214ENST00000528165 ARL6IP1Q15041 203 aa12.88□□□□□ -0.35
CAPN1-214ENST00000528165 C9orf40Q8IXQ3 194 aa12.88□□□□□ -0.35
CAPN1-214ENST00000528165 OR13H1Q8NG92 308 aa12.88□□□□□ -0.35
CAPN1-214ENST00000528165 STT3BQ8TCJ2 826 aa12.88□□□□□ -0.35
CAPN1-214ENST00000528165 NPRL2Q8WTW4 380 aa12.88□□□□□ -0.35
CAPN1-214ENST00000528165 TMEM234Q8WY98 164 aa12.88□□□□□ -0.35
CAPN1-214ENST00000528165 GPR61Q9BZJ8 451 aa12.88□□□□□ -0.35
CAPN1-214ENST00000528165 LANCL2Q9NS86 450 aa12.88□□□□□ -0.35
CAPN1-214ENST00000528165 CHD7Q9P2D1 2997 aa12.88□□□□□ -0.35
CAPN1-214ENST00000528165 ELOA3CA0A087WX78 387 aaPredicted RBP12.87□□□□□ -0.35
CAPN1-214ENST00000528165 IGKV1-9A0A0C4DH69 117 aa12.87□□□□□ -0.35
CAPN1-214ENST00000528165 DHRS7CA6NNS2 312 aa12.87□□□□□ -0.35
CAPN1-214ENST00000528165 BCAT2O15382 392 aaPredicted RBP12.87□□□□□ -0.35
CAPN1-214ENST00000528165 ZNF17P17021 662 aa12.87□□□□□ -0.35
CAPN1-214ENST00000528165 DDTP30046 118 aa12.87□□□□□ -0.35
CAPN1-214ENST00000528165 PKIAP61925 76 aa12.87□□□□□ -0.35
CAPN1-214ENST00000528165 KISS1Q15726 138 aa12.87□□□□□ -0.35
CAPN1-214ENST00000528165 C1QL2Q7Z5L3 287 aa12.87□□□□□ -0.35
CAPN1-214ENST00000528165 TOMM40LQ969M1 308 aa12.87□□□□□ -0.35
CAPN1-214ENST00000528165 GABRG3Q99928 467 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms