RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 IL23AQ9NPF7 189 aa12.33□□□□□ -0.44
LRRK1-202ENST00000525284 FGF21Q9NSA1 209 aa12.33□□□□□ -0.44
LRRK1-202ENST00000525284 C5P01031 1676 aa12.33□□□□□ -0.44
LRRK1-202ENST00000525284 ACSM5Q6NUN0 579 aa12.33□□□□□ -0.44
LRRK1-202ENST00000525284 ZNF880Q6PDB4 577 aa12.33□□□□□ -0.44
LRRK1-202ENST00000525284 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.33□□□□□ -0.44
LRRK1-202ENST00000525284 ZNF391Q9UJN7 358 aa12.33□□□□□ -0.44
LRRK1-202ENST00000525284 ZNF142P52746 1687 aaPredicted RBP12.33□□□□□ -0.44
LRRK1-202ENST00000525284 PLAURQ03405 335 aa12.32□□□□□ -0.44
LRRK1-202ENST00000525284 NKAIN1Q4KMZ8 207 aa12.32□□□□□ -0.44
LRRK1-202ENST00000525284 RGPD5Q99666 1765 aa12.32□□□□□ -0.44
LRRK1-202ENST00000525284 CRYABP02511 175 aaKnown RBP12.32□□□□□ -0.44
LRRK1-202ENST00000525284 CEACAM6P40199 344 aa12.32□□□□□ -0.44
LRRK1-202ENST00000525284 PCP4P48539 62 aa12.32□□□□□ -0.44
LRRK1-202ENST00000525284 CTU2Q2VPK5 515 aaKnown RBP12.32□□□□□ -0.44
LRRK1-202ENST00000525284 SMIM21Q3B7S5 101 aa12.32□□□□□ -0.44
LRRK1-202ENST00000525284 C10orf126Q8N4M7 172 aa12.32□□□□□ -0.44
LRRK1-202ENST00000525284 SLC25A43Q8WUT9 341 aaPredicted RBP12.32□□□□□ -0.44
LRRK1-202ENST00000525284 VN1R1Q9GZP7 353 aa12.32□□□□□ -0.44
LRRK1-202ENST00000525284 CSNK1G1Q9HCP0 422 aa12.32□□□□□ -0.44
LRRK1-202ENST00000525284 R4GMQ9 66 aa12.32□□□□□ -0.44
LRRK1-202ENST00000525284 TMEM127O75204 238 aa12.32□□□□□ -0.44
LRRK1-202ENST00000525284 HINT1P49773 126 aaPredicted RBP12.32□□□□□ -0.44
LRRK1-202ENST00000525284 PRSS8Q16651 343 aa12.32□□□□□ -0.44
LRRK1-202ENST00000525284 LRRC10Q5BKY1 277 aa12.32□□□□□ -0.44
LRRK1-202ENST00000525284 FAM71E1Q6IPT2 247 aa12.32□□□□□ -0.44
LRRK1-202ENST00000525284 TAS1R1Q7RTX1 841 aa12.32□□□□□ -0.44
LRRK1-202ENST00000525284 MRAP2Q96G30 205 aa12.32□□□□□ -0.44
LRRK1-202ENST00000525284 MBLAC1A4D2B0 266 aaPredicted RBP12.32□□□□□ -0.44
LRRK1-202ENST00000525284 P01737 135 aa12.32□□□□□ -0.44
LRRK1-202ENST00000525284 DAOP14920 347 aa12.32□□□□□ -0.44
LRRK1-202ENST00000525284 ZNF137PP52743 207 aa12.32□□□□□ -0.44
LRRK1-202ENST00000525284 HOXA4Q00056 320 aaPredicted RBP12.32□□□□□ -0.44
LRRK1-202ENST00000525284 SHBQ15464 509 aa12.32□□□□□ -0.44
LRRK1-202ENST00000525284 CD226Q15762 336 aa12.32□□□□□ -0.44
LRRK1-202ENST00000525284 DNLZQ5SXM8 178 aa12.32□□□□□ -0.44
LRRK1-202ENST00000525284 PDPNQ86YL7 162 aa12.32□□□□□ -0.44
LRRK1-202ENST00000525284 IER2Q9BTL4 223 aa12.32□□□□□ -0.44
LRRK1-202ENST00000525284 C10orf71Q711Q0 1435 aa12.32□□□□□ -0.44
LRRK1-202ENST00000525284 NDUFB3O43676 98 aa12.32□□□□□ -0.44
LRRK1-202ENST00000525284 RIGQ13278 110 aa12.32□□□□□ -0.44
LRRK1-202ENST00000525284 TMEM65Q6PI78 240 aa12.32□□□□□ -0.44
LRRK1-202ENST00000525284 MAMSTRQ6ZN01 415 aa12.32□□□□□ -0.44
LRRK1-202ENST00000525284 LRRTM3Q86VH5 581 aa12.32□□□□□ -0.44
LRRK1-202ENST00000525284 CHD2O14647 1828 aaKnown RBP12.32□□□□□ -0.44
LRRK1-202ENST00000525284 SNAI1O95863 264 aaPredicted RBP12.31□□□□□ -0.44
LRRK1-202ENST00000525284 DUSP5Q16690 384 aa12.31□□□□□ -0.44
LRRK1-202ENST00000525284 DND1Q8IYX4 353 aaKnown RBP12.31□□□□□ -0.44
LRRK1-202ENST00000525284 FOXC2Q99958 501 aa12.31□□□□□ -0.44
LRRK1-202ENST00000525284 NAT8Q9UHE5 227 aa12.31□□□□□ -0.44
LRRK1-202ENST00000525284 HSF4Q9ULV5 492 aa12.31□□□□□ -0.44
LRRK1-202ENST00000525284 A4GNTQ9UNA3 340 aa12.31□□□□□ -0.44
LRRK1-202ENST00000525284 DRGXA6NNA5 263 aa12.31□□□□□ -0.44
LRRK1-202ENST00000525284 TNFSF11O14788 317 aa12.31□□□□□ -0.44
LRRK1-202ENST00000525284 SDHBP21912 280 aa12.31□□□□□ -0.44
LRRK1-202ENST00000525284 UBE2L3P68036 154 aaKnown RBP12.31□□□□□ -0.44
LRRK1-202ENST00000525284 C19orf54Q5BKX5 351 aa12.31□□□□□ -0.44
LRRK1-202ENST00000525284 SLCO4C1Q6ZQN7 724 aa12.31□□□□□ -0.44
LRRK1-202ENST00000525284 TMEM229BQ8NBD8 167 aa12.31□□□□□ -0.44
LRRK1-202ENST00000525284 ZNF764Q96H86 408 aaPredicted RBP12.31□□□□□ -0.44
LRRK1-202ENST00000525284 TMEM38AQ9H6F2 299 aa12.31□□□□□ -0.44
LRRK1-202ENST00000525284 ISG20L2Q9H9L3 353 aaKnown RBP12.31□□□□□ -0.44
LRRK1-202ENST00000525284 ZFP30Q9Y2G7 519 aa12.31□□□□□ -0.44
LRRK1-202ENST00000525284 LPAR6P43657 344 aa12.31□□□□□ -0.44
LRRK1-202ENST00000525284 C11orf91Q3C1V1 193 aa12.31□□□□□ -0.44
LRRK1-202ENST00000525284 SCD5Q86SK9 330 aa12.31□□□□□ -0.44
LRRK1-202ENST00000525284 NEIL1Q96FI4 390 aaPredicted RBP12.31□□□□□ -0.44
LRRK1-202ENST00000525284 SLC25A33Q9BSK2 321 aa12.31□□□□□ -0.44
LRRK1-202ENST00000525284 SNED1Q8TER0 1413 aa12.31□□□□□ -0.44
LRRK1-202ENST00000525284 EIF4E2O60573 245 aaKnown RBP12.31□□□□□ -0.44
LRRK1-202ENST00000525284 EGR3Q06889 387 aa12.31□□□□□ -0.44
LRRK1-202ENST00000525284 SLC25A35Q3KQZ1 300 aa12.31□□□□□ -0.44
LRRK1-202ENST00000525284 RNFT1Q5M7Z0 435 aa12.31□□□□□ -0.44
LRRK1-202ENST00000525284 OR10G8Q8NGN5 311 aa12.31□□□□□ -0.44
LRRK1-202ENST00000525284 RAB24Q969Q5 203 aa12.31□□□□□ -0.44
LRRK1-202ENST00000525284 SIGLEC11Q96RL6 698 aa12.31□□□□□ -0.44
LRRK1-202ENST00000525284 ZDHHC5Q9C0B5 715 aa12.31□□□□□ -0.44
LRRK1-202ENST00000525284 MED29Q9NX70 200 aa12.31□□□□□ -0.44
LRRK1-202ENST00000525284 LIM2P55344 173 aa12.31□□□□□ -0.44
LRRK1-202ENST00000525284 ZNF121P58317 390 aaPredicted RBP12.31□□□□□ -0.44
LRRK1-202ENST00000525284 HSF5Q4G112 596 aaPredicted RBP12.31□□□□□ -0.44
LRRK1-202ENST00000525284 NUFIP2Q7Z417 695 aaKnown RBP12.31□□□□□ -0.44
LRRK1-202ENST00000525284 LYG1Q8N1E2 194 aa12.31□□□□□ -0.44
LRRK1-202ENST00000525284 RPEQ96AT9 228 aa12.31□□□□□ -0.44
LRRK1-202ENST00000525284 PIPOXQ9P0Z9 390 aa12.31□□□□□ -0.44
LRRK1-202ENST00000525284 BSXQ3C1V8 233 aa12.31□□□□□ -0.44
LRRK1-202ENST00000525284 PTX4Q96A99 478 aa12.31□□□□□ -0.44
LRRK1-202ENST00000525284 SGK494Q96LW2 274 aa12.31□□□□□ -0.44
LRRK1-202ENST00000525284 APCSP02743 223 aa12.3□□□□□ -0.44
LRRK1-202ENST00000525284 SMIM18P0DKX4 95 aa12.3□□□□□ -0.44
LRRK1-202ENST00000525284 PDLIM5Q96HC4 596 aaKnown RBP12.3□□□□□ -0.44
LRRK1-202ENST00000525284 SEBOXQ9HB31 216 aaPredicted RBP12.3□□□□□ -0.44
LRRK1-202ENST00000525284 TMEM238LA0A1B0GVL6 79 aa12.3□□□□□ -0.44
LRRK1-202ENST00000525284 A6NJY4 79 aa12.3□□□□□ -0.44
LRRK1-202ENST00000525284 DIRC3C9JPN6 131 aa12.3□□□□□ -0.44
LRRK1-202ENST00000525284 FGF2P09038 288 aa12.3□□□□□ -0.44
LRRK1-202ENST00000525284 PPIAP62937 165 aaKnown RBP12.3□□□□□ -0.44
LRRK1-202ENST00000525284 ANKRD55Q3KP44 614 aa12.3□□□□□ -0.44
LRRK1-202ENST00000525284 CALHM1Q8IU99 346 aa12.3□□□□□ -0.44
LRRK1-202ENST00000525284 USP3Q9Y6I4 520 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms