RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 CLVS2Q5SYC1 327 aa10.63□□□□□ -0.71
TRAPPC4-205ENST00000525079 RUSC1-AS1Q66K80 236 aa10.63□□□□□ -0.71
TRAPPC4-205ENST00000525079 STUMQ69YW2 141 aa10.63□□□□□ -0.71
TRAPPC4-205ENST00000525079 DOK3Q7L591 496 aa10.63□□□□□ -0.71
TRAPPC4-205ENST00000525079 SLC36A1Q7Z2H8 476 aa10.63□□□□□ -0.71
TRAPPC4-205ENST00000525079 RDH10Q8IZV5 341 aa10.63□□□□□ -0.71
TRAPPC4-205ENST00000525079 BATF2Q8N1L9 274 aa10.63□□□□□ -0.71
TRAPPC4-205ENST00000525079 PRSS35Q8N3Z0 413 aa10.63□□□□□ -0.71
TRAPPC4-205ENST00000525079 ZNF671Q8TAW3 534 aa10.63□□□□□ -0.71
TRAPPC4-205ENST00000525079 TRMT10AQ8TBZ6 339 aaKnown RBP10.63□□□□□ -0.71
TRAPPC4-205ENST00000525079 AQP3Q92482 292 aa10.63□□□□□ -0.71
TRAPPC4-205ENST00000525079 TBX15Q96SF7 602 aa10.63□□□□□ -0.71
TRAPPC4-205ENST00000525079 ADI1Q9BV57 179 aa10.63□□□□□ -0.71
TRAPPC4-205ENST00000525079 ACOXLQ9NUZ1 547 aa10.63□□□□□ -0.71
TRAPPC4-205ENST00000525079 NLKQ9UBE8 527 aa10.63□□□□□ -0.71
TRAPPC4-205ENST00000525079 NKX6-3A6NJ46 265 aa10.62□□□□□ -0.71
TRAPPC4-205ENST00000525079 OR5B21A6NL26 309 aa10.62□□□□□ -0.71
TRAPPC4-205ENST00000525079 SYT7O43581 403 aa10.62□□□□□ -0.71
TRAPPC4-205ENST00000525079 PLATP00750 562 aa10.62□□□□□ -0.71
TRAPPC4-205ENST00000525079 LIPFP07098 398 aa10.62□□□□□ -0.71
TRAPPC4-205ENST00000525079 KIR3DL2P43630 455 aa10.62□□□□□ -0.71
TRAPPC4-205ENST00000525079 HAAOP46952 286 aa10.62□□□□□ -0.71
TRAPPC4-205ENST00000525079 TGM4P49221 684 aa10.62□□□□□ -0.71
TRAPPC4-205ENST00000525079 OR12D2P58182 307 aa10.62□□□□□ -0.71
TRAPPC4-205ENST00000525079 UBA52P62987 128 aaKnown RBP10.62□□□□□ -0.71
TRAPPC4-205ENST00000525079 BAMBIQ13145 260 aa10.62□□□□□ -0.71
TRAPPC4-205ENST00000525079 SLC25A30Q5SVS4 291 aa10.62□□□□□ -0.71
TRAPPC4-205ENST00000525079 ATPAF1Q5TC12 328 aaPredicted RBP10.62□□□□□ -0.71
TRAPPC4-205ENST00000525079 MEDAGQ5VYS4 303 aa10.62□□□□□ -0.71
TRAPPC4-205ENST00000525079 TMEM42Q69YG0 159 aa10.62□□□□□ -0.71
TRAPPC4-205ENST00000525079 FAM220AQ7Z4H9 259 aa10.62□□□□□ -0.71
TRAPPC4-205ENST00000525079 ENTHD1Q8IYW4 607 aa10.62□□□□□ -0.71
TRAPPC4-205ENST00000525079 PNLDC1Q8NA58 520 aaKnown RBP10.62□□□□□ -0.71
TRAPPC4-205ENST00000525079 ANGPTL6Q8NI99 470 aa10.62□□□□□ -0.71
TRAPPC4-205ENST00000525079 NPRL2Q8WTW4 380 aa10.62□□□□□ -0.71
TRAPPC4-205ENST00000525079 ZFAND2BQ8WV99 257 aa10.62□□□□□ -0.71
TRAPPC4-205ENST00000525079 H1FXQ92522 213 aaKnown RBP10.62□□□□□ -0.71
TRAPPC4-205ENST00000525079 ITFG2Q969R8 447 aa10.62□□□□□ -0.71
TRAPPC4-205ENST00000525079 RNF166Q96A37 237 aaPredicted RBP10.62□□□□□ -0.71
TRAPPC4-205ENST00000525079 TMIGD2Q96BF3 282 aa10.62□□□□□ -0.71
TRAPPC4-205ENST00000525079 C12orf43Q96C57 262 aaKnown RBP10.62□□□□□ -0.71
TRAPPC4-205ENST00000525079 LGALS12Q96DT0 336 aa10.62□□□□□ -0.71
TRAPPC4-205ENST00000525079 WDFY2Q96P53 400 aa10.62□□□□□ -0.71
TRAPPC4-205ENST00000525079 GAFA1Q96PS6 74 aa10.62□□□□□ -0.71
TRAPPC4-205ENST00000525079 CNTD2Q9H8S5 307 aa10.62□□□□□ -0.71
TRAPPC4-205ENST00000525079 AMBNQ9NP70 447 aa10.62□□□□□ -0.71
TRAPPC4-205ENST00000525079 FAM118AQ9NWS6 357 aa10.62□□□□□ -0.71
TRAPPC4-205ENST00000525079 RPUSD1Q9UJJ7 312 aaKnown RBP10.62□□□□□ -0.71
TRAPPC4-205ENST00000525079 LOC100130705A0A1B0GUX0 176 aa10.61□□□□□ -0.71
TRAPPC4-205ENST00000525079 FAM230AA0A1W2PPH8 454 aa10.61□□□□□ -0.71
TRAPPC4-205ENST00000525079 PQLC2LA1A4F0 135 aa10.61□□□□□ -0.71
TRAPPC4-205ENST00000525079 DNAJC9-AS1A6NH13 148 aa10.61□□□□□ -0.71
TRAPPC4-205ENST00000525079 OR2AT4A6NND4 320 aa10.61□□□□□ -0.71
TRAPPC4-205ENST00000525079 J3QLW9 94 aa10.61□□□□□ -0.71
TRAPPC4-205ENST00000525079 J3QRE1 110 aa10.61□□□□□ -0.71
TRAPPC4-205ENST00000525079 DLGAP1O14490 977 aa10.61□□□□□ -0.71
TRAPPC4-205ENST00000525079 ECDO95905 644 aaPredicted RBP10.61□□□□□ -0.71
TRAPPC4-205ENST00000525079 PSG2P11465 335 aa10.61□□□□□ -0.71
TRAPPC4-205ENST00000525079 MMP9P14780 707 aa10.61□□□□□ -0.71
TRAPPC4-205ENST00000525079 ZNF19P17023 458 aa10.61□□□□□ -0.71
TRAPPC4-205ENST00000525079 GABRB1P18505 474 aa10.61□□□□□ -0.71
TRAPPC4-205ENST00000525079 CCL1P22362 96 aa10.61□□□□□ -0.71
TRAPPC4-205ENST00000525079 ISL1P61371 349 aa10.61□□□□□ -0.71
TRAPPC4-205ENST00000525079 PRB3Q04118 309 aaPredicted RBP10.61□□□□□ -0.71
TRAPPC4-205ENST00000525079 ZNF91Q05481 1191 aa10.61□□□□□ -0.71
TRAPPC4-205ENST00000525079 DGUOKQ16854 277 aa10.61□□□□□ -0.71
TRAPPC4-205ENST00000525079 TUSC1Q2TAM9 212 aa10.61□□□□□ -0.71
TRAPPC4-205ENST00000525079 LRRC10Q5BKY1 277 aa10.61□□□□□ -0.71
TRAPPC4-205ENST00000525079 GPR157Q5UAW9 335 aa10.61□□□□□ -0.71
TRAPPC4-205ENST00000525079 METTL11BQ5VVY1 283 aa10.61□□□□□ -0.71
TRAPPC4-205ENST00000525079 ZNF788Q6ZQV5 615 aa10.61□□□□□ -0.71
TRAPPC4-205ENST00000525079 Q6ZSR3 168 aa10.61□□□□□ -0.71
TRAPPC4-205ENST00000525079 LHFPL3Q86UP9 236 aa10.61□□□□□ -0.71
TRAPPC4-205ENST00000525079 ANGPTL5Q86XS5 388 aa10.61□□□□□ -0.71
TRAPPC4-205ENST00000525079 PDZD9Q8IXQ8 264 aa10.61□□□□□ -0.71
TRAPPC4-205ENST00000525079 RHOXF1Q8NHV9 184 aa10.61□□□□□ -0.71
TRAPPC4-205ENST00000525079 FAM216AQ8WUB2 273 aa10.61□□□□□ -0.71
TRAPPC4-205ENST00000525079 STMN2Q93045 179 aa10.61□□□□□ -0.71
TRAPPC4-205ENST00000525079 LHX4Q969G2 390 aa10.61□□□□□ -0.71
TRAPPC4-205ENST00000525079 C1orf147Q96MC9 270 aaPredicted RBP10.61□□□□□ -0.71
TRAPPC4-205ENST00000525079 SIRPDQ9H106 197 aa10.61□□□□□ -0.71
TRAPPC4-205ENST00000525079 PLEKHA1Q9HB21 404 aa10.61□□□□□ -0.71
TRAPPC4-205ENST00000525079 ELL3Q9HB65 397 aaPredicted RBP10.61□□□□□ -0.71
TRAPPC4-205ENST00000525079 ONECUT1Q9UBC0 465 aa10.61□□□□□ -0.71
TRAPPC4-205ENST00000525079 EXOGQ9Y2C4 368 aaKnown RBP10.61□□□□□ -0.71
TRAPPC4-205ENST00000525079 IGKV1D-17A0A075B6S4 117 aa10.6□□□□□ -0.71
TRAPPC4-205ENST00000525079 CENPVL3A0A0U1RRI6 287 aa10.6□□□□□ -0.71
TRAPPC4-205ENST00000525079 LOC107986453A0A1B0GWG9 222 aa10.6□□□□□ -0.71
TRAPPC4-205ENST00000525079 ANKRD61A6NGH8 418 aa10.6□□□□□ -0.71
TRAPPC4-205ENST00000525079 SNTNA6NMZ2 147 aa10.6□□□□□ -0.71
TRAPPC4-205ENST00000525079 SLC16A6O15403 523 aa10.6□□□□□ -0.71
TRAPPC4-205ENST00000525079 INMTO95050 263 aa10.6□□□□□ -0.71
TRAPPC4-205ENST00000525079 ACAA1P09110 424 aaPredicted RBP10.6□□□□□ -0.71
TRAPPC4-205ENST00000525079 DBTP11182 482 aaKnown RBP10.6□□□□□ -0.71
TRAPPC4-205ENST00000525079 NDUFB7P17568 137 aa10.6□□□□□ -0.71
TRAPPC4-205ENST00000525079 CEBPDP49716 269 aaPredicted RBP10.6□□□□□ -0.71
TRAPPC4-205ENST00000525079 DLX1P56177 255 aa10.6□□□□□ -0.71
TRAPPC4-205ENST00000525079 NANOS3P60323 173 aaKnown RBP10.6□□□□□ -0.71
TRAPPC4-205ENST00000525079 ACTC1P68032 377 aa10.6□□□□□ -0.71
TRAPPC4-205ENST00000525079 ACTA1P68133 377 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms