RNA–Protein interactions for RNA: ENST00000524127.5

CTNNA1-241, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 483 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-241ENST00000524127 IP6K3Q96PC2 410 aa4.37□□□□□ -1.71
CTNNA1-241ENST00000524127 GAL3ST1Q99999 423 aa4.37□□□□□ -1.71
CTNNA1-241ENST00000524127 URM1Q9BTM9 101 aaKnown RBP4.37□□□□□ -1.71
CTNNA1-241ENST00000524127 NRSN2Q9GZP1 204 aa4.37□□□□□ -1.71
CTNNA1-241ENST00000524127 RAB33BQ9H082 229 aa4.37□□□□□ -1.71
CTNNA1-241ENST00000524127 PRDM13Q9H4Q3 707 aa4.37□□□□□ -1.71
CTNNA1-241ENST00000524127 ZMAT3Q9HA38 289 aaKnown RBP4.37□□□□□ -1.71
CTNNA1-241ENST00000524127 CAPN10Q9HC96 672 aa4.37□□□□□ -1.71
CTNNA1-241ENST00000524127 PRTFDC1Q9NRG1 225 aa4.37□□□□□ -1.71
CTNNA1-241ENST00000524127 SDHAF3Q9NRP4 125 aa4.37□□□□□ -1.71
CTNNA1-241ENST00000524127 FAM206AQ9NX38 181 aa4.37□□□□□ -1.71
CTNNA1-241ENST00000524127 PPP1R14DQ9NXH3 145 aa4.37□□□□□ -1.71
CTNNA1-241ENST00000524127 PILRBQ9UKJ0 227 aa4.37□□□□□ -1.71
CTNNA1-241ENST00000524127 C14orf166Q9Y224 244 aaKnown RBP4.37□□□□□ -1.71
CTNNA1-241ENST00000524127 MRPS28Q9Y2Q9 187 aaKnown RBP4.37□□□□□ -1.71
CTNNA1-241ENST00000524127 SNRNP200O75643 2136 aaKnown RBP4.37□□□□□ -1.71
CTNNA1-241ENST00000524127 AHCTF1Q8WYP5 2266 aa4.37□□□□□ -1.71
CTNNA1-241ENST00000524127 SCN2AQ99250 2005 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 ZFYVE26Q68DK2 2539 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 ANKRD11Q6UB99 2663 aaPredicted RBP4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 SMG1Q96Q15 3661 aaKnown RBP4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 LOC100509620A0A075B734 347 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 TRBV23-1A0A0A0MS06 115 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 A0A0A6YYD4 124 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 A0A1W2PP55 124 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 A0A1W2PPE2 198 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 CRYM-AS1A6NIL9 109 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 IFITM10A6NMD0 228 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 ZNF724A8MTY0 619 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 ZNF587BE7ETH6 402 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 TSTD3H0UI37 97 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 H7C1Q1 480 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 K7N7A8 449 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 PPP1R2P9O14990 202 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 AGPAT2O15120 278 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 GPR37O15354 613 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 RAD51DO75771 328 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 AHSA1O95433 338 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 NSA2O95478 260 aaKnown RBP4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 TTRP02766 147 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 HSPB1P04792 205 aaKnown RBP4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 KLK3P07288 261 aaPredicted RBP4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 ZNF20P17024 532 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 DDTP30046 118 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 PTGER4P35408 488 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 ZNF93P35789 620 aaPredicted RBP4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 RPS27P42677 84 aaKnown RBP4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 DHPSP49366 369 aaPredicted RBP4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 DAP3P51398 398 aaKnown RBP4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 AFF3P51826 1226 aaKnown RBP4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 TMEM50BP56557 158 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 SPCS3P61009 180 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 FOXK1P85037 733 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 FOXO1Q12778 655 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 HNF4GQ14541 408 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 RSPO4Q2I0M5 234 aaPredicted RBP4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 SLC22A6Q4U2R8 563 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 PLAC9Q5JTB6 97 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 C9orf152Q5JTZ5 239 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 C1QL3Q5VWW1 255 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 GGNBP1Q5YKI7 109 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 SP5Q6BEB4 398 aaPredicted RBP4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 OR2A2Q6IF42 318 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 FIP1L1Q6UN15 594 aaKnown RBP4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 GLIPR1L1Q6UWM5 242 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 DPPA3Q6W0C5 159 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 SSX9Q7RTT3 188 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 SLC35E3Q7Z769 313 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 OOSP2Q86WS3 158 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 FAM219AQ8IW50 185 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 TMEM151BQ8IW70 566 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 SGPP2Q8IWX5 399 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 OR5AS1Q8N127 324 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 HIST3H2BBQ8N257 126 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 ZNF248Q8NDW4 579 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 BHLHE23Q8NDY6 225 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 BEND2Q8NDZ0 799 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 OR5L2Q8NGL0 311 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 STT3BQ8TCJ2 826 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 SSC4DQ8WTU2 575 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 HPSE2Q8WWQ2 592 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 ASB10Q8WXI3 467 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 DNASE2BQ8WZ79 361 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 MR1Q95460 341 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 NKD1Q969G9 470 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 RAB24Q969Q5 203 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 SLAMF9Q96A28 289 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 ADAT3Q96EY9 351 aaPredicted RBP4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 RCC1LQ96I51 464 aaKnown RBP4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 ABHD14BQ96IU4 210 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 NOL4LQ96MY1 436 aaPredicted RBP4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 WDR77Q9BQA1 342 aaPredicted RBP4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 SYT3Q9BQG1 590 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 RSRP1Q9BUV0 290 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 TM2D1Q9BX74 207 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 SUCNR1Q9BXA5 334 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 TMEM59Q9BXS4 323 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 OR11A1Q9GZK7 315 aa4.36□□□□□ -1.71
CTNNA1-241ENST00000524127 EIF5A2Q9GZV4 153 aaKnown RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms