RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 FTH1P19P0C7X4 201 aa14.47□□□□□ -0.09
PCDHA3-201ENST00000522353 ID4P47928 161 aa14.47□□□□□ -0.09
PCDHA3-201ENST00000522353 CLDN20P56880 219 aa14.47□□□□□ -0.09
PCDHA3-201ENST00000522353 H3F3CQ6NXT2 135 aa14.47□□□□□ -0.09
PCDHA3-201ENST00000522353 LYG1Q8N1E2 194 aa14.47□□□□□ -0.09
PCDHA3-201ENST00000522353 OR6C3Q9NZP0 311 aa14.47□□□□□ -0.09
PCDHA3-201ENST00000522353 OR5H1A6NKK0 313 aa14.47□□□□□ -0.09
PCDHA3-201ENST00000522353 EPHA2P29317 976 aa14.47□□□□□ -0.09
PCDHA3-201ENST00000522353 MAGEB1P43366 347 aa14.47□□□□□ -0.09
PCDHA3-201ENST00000522353 SNRPNP63162 240 aaKnown RBP14.47□□□□□ -0.09
PCDHA3-201ENST00000522353 ZNF816Q0VGE8 651 aaPredicted RBP14.47□□□□□ -0.09
PCDHA3-201ENST00000522353 DMRTC1Q5HYR2 192 aa14.47□□□□□ -0.09
PCDHA3-201ENST00000522353 WDR38Q5JTN6 314 aa14.47□□□□□ -0.09
PCDHA3-201ENST00000522353 LHX4Q969G2 390 aa14.47□□□□□ -0.09
PCDHA3-201ENST00000522353 SLC6A13Q9NSD5 602 aa14.47□□□□□ -0.09
PCDHA3-201ENST00000522353 KIAA1551Q9HCM1 1747 aa14.47□□□□□ -0.09
PCDHA3-201ENST00000522353 CLEC18AA5D8T8 446 aa14.47□□□□□ -0.09
PCDHA3-201ENST00000522353 COX7A2P2O60397 106 aa14.47□□□□□ -0.09
PCDHA3-201ENST00000522353 CLEC18CQ8NCF0 446 aa14.47□□□□□ -0.09
PCDHA3-201ENST00000522353 FBXW5Q969U6 566 aa14.47□□□□□ -0.09
PCDHA3-201ENST00000522353 VSTM2LQ96N03 204 aa14.47□□□□□ -0.09
PCDHA3-201ENST00000522353 MS4A5Q9H3V2 200 aa14.47□□□□□ -0.09
PCDHA3-201ENST00000522353 SLC17A5Q9NRA2 495 aa14.47□□□□□ -0.09
PCDHA3-201ENST00000522353 THYN1Q9P016 225 aa14.47□□□□□ -0.09
PCDHA3-201ENST00000522353 PPP1R2P9O14990 202 aa14.46□□□□□ -0.09
PCDHA3-201ENST00000522353 GP1BAP07359 652 aa14.46□□□□□ -0.09
PCDHA3-201ENST00000522353 PXDC1Q5TGL8 231 aa14.46□□□□□ -0.09
PCDHA3-201ENST00000522353 SIRT5Q9NXA8 310 aa14.46□□□□□ -0.09
PCDHA3-201ENST00000522353 GAB2Q9UQC2 676 aa14.46□□□□□ -0.09
PCDHA3-201ENST00000522353 TRPM6Q9BX84 2022 aa14.46□□□□□ -0.09
PCDHA3-201ENST00000522353 A0A0B4J203 849 aa14.46□□□□□ -0.09
PCDHA3-201ENST00000522353 BRS3P32247 399 aa14.46□□□□□ -0.09
PCDHA3-201ENST00000522353 CDK5Q00535 292 aa14.46□□□□□ -0.09
PCDHA3-201ENST00000522353 CDH26Q8IXH8 852 aa14.46□□□□□ -0.09
PCDHA3-201ENST00000522353 TMEM229BQ8NBD8 167 aa14.46□□□□□ -0.09
PCDHA3-201ENST00000522353 GPR32P1Q8NGA4 272 aa14.46□□□□□ -0.09
PCDHA3-201ENST00000522353 TINAGL1Q9GZM7 467 aaPredicted RBP14.46□□□□□ -0.09
PCDHA3-201ENST00000522353 SLC25A32Q9H2D1 315 aa14.46□□□□□ -0.09
PCDHA3-201ENST00000522353 TGM1P22735 817 aa14.46□□□□□ -0.09
PCDHA3-201ENST00000522353 ZG16BQ96DA0 208 aa14.46□□□□□ -0.09
PCDHA3-201ENST00000522353 SEC16AO15027 2179 aa14.46□□□□□ -0.09
PCDHA3-201ENST00000522353 ICE1Q9Y2F5 2266 aa14.46□□□□□ -0.09
PCDHA3-201ENST00000522353 A0A0A6YYJ9 748 aa14.46□□□□□ -0.1
PCDHA3-201ENST00000522353 TCRBV16S1A1N1A0A5B0 115 aa14.46□□□□□ -0.1
PCDHA3-201ENST00000522353 CCL21O00585 134 aa14.46□□□□□ -0.1
PCDHA3-201ENST00000522353 OR10V1Q8NGI7 309 aa14.46□□□□□ -0.1
PCDHA3-201ENST00000522353 ZNF385DQ9H6B1 395 aa14.46□□□□□ -0.1
PCDHA3-201ENST00000522353 NTN4Q9HB63 628 aa14.46□□□□□ -0.1
PCDHA3-201ENST00000522353 OR6C68A6NDL8 312 aa14.45□□□□□ -0.1
PCDHA3-201ENST00000522353 PPP5D1E7EU14 171 aa14.45□□□□□ -0.1
PCDHA3-201ENST00000522353 DNPH1O43598 174 aa14.45□□□□□ -0.1
PCDHA3-201ENST00000522353 SULT1A3P0DMM9 295 aa14.45□□□□□ -0.1
PCDHA3-201ENST00000522353 SULT1A4P0DMN0 295 aa14.45□□□□□ -0.1
PCDHA3-201ENST00000522353 PAX6P26367 422 aa14.45□□□□□ -0.1
PCDHA3-201ENST00000522353 PTGFRP43088 359 aa14.45□□□□□ -0.1
PCDHA3-201ENST00000522353 BAMBIQ13145 260 aa14.45□□□□□ -0.1
PCDHA3-201ENST00000522353 GPNMBQ14956 572 aa14.45□□□□□ -0.1
PCDHA3-201ENST00000522353 MRM1Q6IN84 353 aaKnown RBP14.45□□□□□ -0.1
PCDHA3-201ENST00000522353 TMED6Q8WW62 240 aa14.45□□□□□ -0.1
PCDHA3-201ENST00000522353 DERL3Q96Q80 235 aa14.45□□□□□ -0.1
PCDHA3-201ENST00000522353 ZNF629Q9UEG4 869 aaPredicted RBP14.45□□□□□ -0.1
PCDHA3-201ENST00000522353 TIMM9Q9Y5J7 89 aa14.45□□□□□ -0.1
PCDHA3-201ENST00000522353 TRIOBPQ9H2D6 2365 aa14.45□□□□□ -0.1
PCDHA3-201ENST00000522353 SHROOM3Q8TF72 1996 aa14.45□□□□□ -0.1
PCDHA3-201ENST00000522353 HOXD4P09016 255 aaPredicted RBP14.45□□□□□ -0.1
PCDHA3-201ENST00000522353 MPGP29372 298 aa14.45□□□□□ -0.1
PCDHA3-201ENST00000522353 C21orf58P58505 322 aa14.45□□□□□ -0.1
PCDHA3-201ENST00000522353 C16orf97H3BN30 126 aa14.45□□□□□ -0.1
PCDHA3-201ENST00000522353 CYTIPO60759 359 aa14.45□□□□□ -0.1
PCDHA3-201ENST00000522353 COX7A1P24310 79 aa14.45□□□□□ -0.1
PCDHA3-201ENST00000522353 PHYHD1Q5SRE7 291 aa14.45□□□□□ -0.1
PCDHA3-201ENST00000522353 UBE3DQ7Z6J8 389 aa14.45□□□□□ -0.1
PCDHA3-201ENST00000522353 BPIFCQ8NFQ6 507 aa14.45□□□□□ -0.1
PCDHA3-201ENST00000522353 TMEM171Q8WVE6 324 aa14.45□□□□□ -0.1
PCDHA3-201ENST00000522353 PTP4A1Q93096 173 aa14.45□□□□□ -0.1
PCDHA3-201ENST00000522353 NME2P1O60361 137 aa14.45□□□□□ -0.1
PCDHA3-201ENST00000522353 MMP15P51511 669 aa14.45□□□□□ -0.1
PCDHA3-201ENST00000522353 LSM6P62312 80 aaKnown RBP14.45□□□□□ -0.1
PCDHA3-201ENST00000522353 CDC20Q12834 499 aa14.45□□□□□ -0.1
PCDHA3-201ENST00000522353 PLA1AQ53H76 456 aa14.45□□□□□ -0.1
PCDHA3-201ENST00000522353 ZNF485Q8NCK3 441 aa14.45□□□□□ -0.1
PCDHA3-201ENST00000522353 OR8B3Q8NGG8 313 aa14.45□□□□□ -0.1
PCDHA3-201ENST00000522353 ORAI1Q96D31 301 aa14.45□□□□□ -0.1
PCDHA3-201ENST00000522353 OR8B2Q96RD0 313 aa14.45□□□□□ -0.1
PCDHA3-201ENST00000522353 H3BMH7 237 aa14.44□□□□□ -0.1
PCDHA3-201ENST00000522353 GNG10P50151 68 aa14.44□□□□□ -0.1
PCDHA3-201ENST00000522353 LCN15Q6UWW0 184 aa14.44□□□□□ -0.1
PCDHA3-201ENST00000522353 TUSC5Q8IXB3 177 aa14.44□□□□□ -0.1
PCDHA3-201ENST00000522353 GALP22466 123 aa14.44□□□□□ -0.1
PCDHA3-201ENST00000522353 DCTDP32321 178 aa14.44□□□□□ -0.1
PCDHA3-201ENST00000522353 STARD6P59095 220 aa14.44□□□□□ -0.1
PCDHA3-201ENST00000522353 FAAP20Q6NZ36 180 aa14.44□□□□□ -0.1
PCDHA3-201ENST00000522353 OR2M7Q8NG81 312 aa14.44□□□□□ -0.1
PCDHA3-201ENST00000522353 OR4C16Q8NGL9 310 aa14.44□□□□□ -0.1
PCDHA3-201ENST00000522353 ACY3Q96HD9 319 aa14.44□□□□□ -0.1
PCDHA3-201ENST00000522353 NTMQ9P121 344 aa14.44□□□□□ -0.1
PCDHA3-201ENST00000522353 LIPT2A6NK58 231 aa14.44□□□□□ -0.1
PCDHA3-201ENST00000522353 C3orf80F5H4A9 247 aa14.44□□□□□ -0.1
PCDHA3-201ENST00000522353 MASP2O00187 686 aa14.44□□□□□ -0.1
PCDHA3-201ENST00000522353 GFRA3O60609 400 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms