RNA–Protein interactions for RNA: ENST00000519664.1

SYNPO-204, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-204ENST00000519664 GSTP1P09211 210 aaKnown RBP10.4□□□□□ -0.74
SYNPO-204ENST00000519664 RRADP55042 308 aa10.4□□□□□ -0.74
SYNPO-204ENST00000519664 PDLIM3Q53GG5 364 aaPredicted RBP10.4□□□□□ -0.74
SYNPO-204ENST00000519664 HIST2H3PS2Q5TEC6 136 aa10.4□□□□□ -0.74
SYNPO-204ENST00000519664 CDC20BQ86Y33 519 aa10.4□□□□□ -0.74
SYNPO-204ENST00000519664 GCNT2Q8N0V5 402 aa10.4□□□□□ -0.74
SYNPO-204ENST00000519664 MUCL1Q96DR8 90 aa10.4□□□□□ -0.74
SYNPO-204ENST00000519664 SPACA1Q9HBV2 294 aa10.4□□□□□ -0.74
SYNPO-204ENST00000519664 P4HTMQ9NXG6 502 aa10.4□□□□□ -0.74
SYNPO-204ENST00000519664 OR2M5A3KFT3 312 aa10.4□□□□□ -0.74
SYNPO-204ENST00000519664 FKBP2P26885 142 aaKnown RBP10.4□□□□□ -0.74
SYNPO-204ENST00000519664 GALNSP34059 522 aa10.4□□□□□ -0.74
SYNPO-204ENST00000519664 PTGER4P35408 488 aa10.4□□□□□ -0.74
SYNPO-204ENST00000519664 OR2B8PP59922 312 aa10.4□□□□□ -0.74
SYNPO-204ENST00000519664 PLA1AQ53H76 456 aa10.4□□□□□ -0.74
SYNPO-204ENST00000519664 LCN15Q6UWW0 184 aa10.4□□□□□ -0.74
SYNPO-204ENST00000519664 TMEM123Q8N131 208 aa10.4□□□□□ -0.74
SYNPO-204ENST00000519664 R4GN57 208 aa10.4□□□□□ -0.74
SYNPO-204ENST00000519664 ATRXP46100 2492 aa10.4□□□□□ -0.74
SYNPO-204ENST00000519664 ANKRD36A6QL64 1941 aa10.4□□□□□ -0.74
SYNPO-204ENST00000519664 RFPL4AA6NLU0 287 aa10.4□□□□□ -0.74
SYNPO-204ENST00000519664 RFPL4AL1F8VTS6 287 aa10.4□□□□□ -0.74
SYNPO-204ENST00000519664 AQP8O94778 261 aa10.4□□□□□ -0.74
SYNPO-204ENST00000519664 HPNP05981 417 aa10.4□□□□□ -0.74
SYNPO-204ENST00000519664 NFYBP25208 207 aa10.4□□□□□ -0.74
SYNPO-204ENST00000519664 GPM6AP51674 278 aa10.4□□□□□ -0.74
SYNPO-204ENST00000519664 SLC10A1Q14973 349 aa10.4□□□□□ -0.74
SYNPO-204ENST00000519664 SPANXN5Q5MJ07 72 aa10.4□□□□□ -0.74
SYNPO-204ENST00000519664 ZNF600Q6ZNG1 722 aa10.4□□□□□ -0.74
SYNPO-204ENST00000519664 CA10Q9NS85 328 aa10.4□□□□□ -0.74
SYNPO-204ENST00000519664 SLC39A9Q9NUM3 307 aa10.4□□□□□ -0.74
SYNPO-204ENST00000519664 CREBBPQ92793 2442 aa10.4□□□□□ -0.74
SYNPO-204ENST00000519664 NOTCH3Q9UM47 2321 aa10.4□□□□□ -0.75
SYNPO-204ENST00000519664 TNFSF15O95150 251 aa10.4□□□□□ -0.75
SYNPO-204ENST00000519664 HIST1H1DP16402 221 aaKnown RBP10.4□□□□□ -0.75
SYNPO-204ENST00000519664 RPS16P62249 146 aaKnown RBP10.4□□□□□ -0.75
SYNPO-204ENST00000519664 PPIAP62937 165 aaKnown RBP10.4□□□□□ -0.75
SYNPO-204ENST00000519664 ZNF626Q68DY1 528 aa10.4□□□□□ -0.75
SYNPO-204ENST00000519664 CXorf67Q86X51 503 aaPredicted RBP10.4□□□□□ -0.75
SYNPO-204ENST00000519664 OR8B12Q8NGG6 310 aa10.4□□□□□ -0.75
SYNPO-204ENST00000519664 A0A087WZY1 265 aa10.39□□□□□ -0.75
SYNPO-204ENST00000519664 ZNF732B4DXR9 585 aa10.39□□□□□ -0.75
SYNPO-204ENST00000519664 SUMO3P55854 103 aaPredicted RBP10.39□□□□□ -0.75
SYNPO-204ENST00000519664 COTL1Q14019 142 aa10.39□□□□□ -0.75
SYNPO-204ENST00000519664 CLEC12BQ2HXU8 276 aa10.39□□□□□ -0.75
SYNPO-204ENST00000519664 TSPO2Q5TGU0 170 aa10.39□□□□□ -0.75
SYNPO-204ENST00000519664 ZFP62Q8NB50 900 aaPredicted RBP10.39□□□□□ -0.75
SYNPO-204ENST00000519664 BPIFCQ8NFQ6 507 aa10.39□□□□□ -0.75
SYNPO-204ENST00000519664 C2orf50Q96LR7 162 aa10.39□□□□□ -0.75
SYNPO-204ENST00000519664 SDHCQ99643 169 aaPredicted RBP10.39□□□□□ -0.75
SYNPO-204ENST00000519664 DOCK4Q8N1I0 1966 aa10.39□□□□□ -0.75
SYNPO-204ENST00000519664 PCNTO95613 3336 aa10.39□□□□□ -0.75
SYNPO-204ENST00000519664 SCN4AP35499 1836 aa10.39□□□□□ -0.75
SYNPO-204ENST00000519664 ZNF724A8MTY0 619 aa10.39□□□□□ -0.75
SYNPO-204ENST00000519664 ZNF705FA8MVS1 300 aaPredicted RBP10.39□□□□□ -0.75
SYNPO-204ENST00000519664 ZNF705DP0CH99 300 aaPredicted RBP10.39□□□□□ -0.75
SYNPO-204ENST00000519664 ZNF705BP0CI00 300 aaPredicted RBP10.39□□□□□ -0.75
SYNPO-204ENST00000519664 RAB32Q13637 225 aa10.39□□□□□ -0.75
SYNPO-204ENST00000519664 MSMO1Q15800 293 aa10.39□□□□□ -0.75
SYNPO-204ENST00000519664 SHISA5Q8N114 240 aa10.39□□□□□ -0.75
SYNPO-204ENST00000519664 OSR2Q8N2R0 312 aa10.39□□□□□ -0.75
SYNPO-204ENST00000519664 ZMIZ1Q9ULJ6 1067 aa10.39□□□□□ -0.75
SYNPO-204ENST00000519664 PCDHB10Q9UN67 800 aa10.39□□□□□ -0.75
SYNPO-204ENST00000519664 MASP2O00187 686 aa10.39□□□□□ -0.75
SYNPO-204ENST00000519664 CYTIPO60759 359 aa10.39□□□□□ -0.75
SYNPO-204ENST00000519664 ADRA2AP08913 450 aa10.39□□□□□ -0.75
SYNPO-204ENST00000519664 IAPPP10997 89 aa10.39□□□□□ -0.75
SYNPO-204ENST00000519664 EPHA8P29322 1005 aaPredicted RBP10.39□□□□□ -0.75
SYNPO-204ENST00000519664 DSCR4P56555 118 aaPredicted RBP10.39□□□□□ -0.75
SYNPO-204ENST00000519664 RAB11AP62491 216 aa10.39□□□□□ -0.75
SYNPO-204ENST00000519664 RAB1AP62820 205 aa10.39□□□□□ -0.75
SYNPO-204ENST00000519664 ZNF266Q14584 549 aa10.39□□□□□ -0.75
SYNPO-204ENST00000519664 STPG2Q8N412 459 aa10.39□□□□□ -0.75
SYNPO-204ENST00000519664 OR1F12Q8NHA8 337 aa10.39□□□□□ -0.75
SYNPO-204ENST00000519664 CXorf58Q96LI9 332 aa10.39□□□□□ -0.75
SYNPO-204ENST00000519664 WDR81Q562E7 1941 aa10.38□□□□□ -0.75
SYNPO-204ENST00000519664 A0A1W2PP11 408 aa10.38□□□□□ -0.75
SYNPO-204ENST00000519664 H7C1Q1 480 aa10.38□□□□□ -0.75
SYNPO-204ENST00000519664 PNPP00491 289 aa10.38□□□□□ -0.75
SYNPO-204ENST00000519664 HLA-DQB1P01920 261 aa10.38□□□□□ -0.75
SYNPO-204ENST00000519664 TLE1Q04724 770 aa10.38□□□□□ -0.75
SYNPO-204ENST00000519664 KLF9Q13886 244 aaPredicted RBP10.38□□□□□ -0.75
SYNPO-204ENST00000519664 OVCH2Q7RTZ1 564 aa10.38□□□□□ -0.75
SYNPO-204ENST00000519664 OR2V1Q8NHB1 315 aa10.38□□□□□ -0.75
SYNPO-204ENST00000519664 SCMH1Q96GD3 660 aa10.38□□□□□ -0.75
SYNPO-204ENST00000519664 PGLYRP3Q96LB9 341 aa10.38□□□□□ -0.75
SYNPO-204ENST00000519664 GAR1Q9NY12 217 aaKnown RBP10.38□□□□□ -0.75
SYNPO-204ENST00000519664 ZNF236Q9UL36 1845 aa10.38□□□□□ -0.75
SYNPO-204ENST00000519664 JTBO76095 146 aa10.38□□□□□ -0.75
SYNPO-204ENST00000519664 IGF2P01344 180 aa10.38□□□□□ -0.75
SYNPO-204ENST00000519664 CELA2AP08217 269 aa10.38□□□□□ -0.75
SYNPO-204ENST00000519664 HOXB1P14653 301 aaPredicted RBP10.38□□□□□ -0.75
SYNPO-204ENST00000519664 NQO2P16083 231 aa10.38□□□□□ -0.75
SYNPO-204ENST00000519664 BAXQ07812 192 aa10.38□□□□□ -0.75
SYNPO-204ENST00000519664 FABP9Q0Z7S8 132 aa10.38□□□□□ -0.75
SYNPO-204ENST00000519664 PDZD11Q5EBL8 140 aa10.38□□□□□ -0.75
SYNPO-204ENST00000519664 ACER2Q5QJU3 275 aa10.38□□□□□ -0.75
SYNPO-204ENST00000519664 SPINK14Q6IE38 97 aa10.38□□□□□ -0.75
SYNPO-204ENST00000519664 TMEM178AQ8NBL3 297 aa10.38□□□□□ -0.75
SYNPO-204ENST00000519664 HEYLQ9NQ87 328 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms