RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 PPIAL4GP0DN37 164 aa7.76□□□□□ -1.17
HDAC3-215ENST00000519474 PRDX4Q13162 271 aa7.76□□□□□ -1.17
HDAC3-215ENST00000519474 SCGB2A2Q13296 93 aa7.76□□□□□ -1.17
HDAC3-215ENST00000519474 NXNL2Q5VZ03 156 aa7.76□□□□□ -1.17
HDAC3-215ENST00000519474 WDR73Q6P4I2 378 aa7.76□□□□□ -1.17
HDAC3-215ENST00000519474 WDR82Q6UXN9 313 aa7.76□□□□□ -1.17
HDAC3-215ENST00000519474 FAM90A1Q86YD7 464 aa7.76□□□□□ -1.17
HDAC3-215ENST00000519474 ZNF679Q8IYX0 411 aa7.76□□□□□ -1.17
HDAC3-215ENST00000519474 OR8S1Q8NH09 359 aa7.76□□□□□ -1.17
HDAC3-215ENST00000519474 TMEM163Q8TC26 289 aa7.76□□□□□ -1.17
HDAC3-215ENST00000519474 OR5P3Q8WZ94 311 aa7.76□□□□□ -1.17
HDAC3-215ENST00000519474 UBE2FQ969M7 185 aa7.76□□□□□ -1.17
HDAC3-215ENST00000519474 UPRTQ96BW1 309 aa7.76□□□□□ -1.17
HDAC3-215ENST00000519474 CENPNQ96H22 339 aaPredicted RBP7.76□□□□□ -1.17
HDAC3-215ENST00000519474 RNF170Q96K19 258 aa7.76□□□□□ -1.17
HDAC3-215ENST00000519474 ZNF48Q96MX3 618 aaPredicted RBP7.76□□□□□ -1.17
HDAC3-215ENST00000519474 OR8B4Q96RC9 309 aa7.76□□□□□ -1.17
HDAC3-215ENST00000519474 MRI1Q9BV20 369 aa7.76□□□□□ -1.17
HDAC3-215ENST00000519474 SUCNR1Q9BXA5 334 aa7.76□□□□□ -1.17
HDAC3-215ENST00000519474 GABARAPL1Q9H0R8 117 aa7.76□□□□□ -1.17
HDAC3-215ENST00000519474 TLNRD1Q9H1K6 362 aa7.76□□□□□ -1.17
HDAC3-215ENST00000519474 LIN7BQ9HAP6 207 aa7.76□□□□□ -1.17
HDAC3-215ENST00000519474 HAO2Q9NYQ3 351 aa7.76□□□□□ -1.17
HDAC3-215ENST00000519474 KAAG1Q9UBP8 84 aa7.76□□□□□ -1.17
HDAC3-215ENST00000519474 CLN8Q9UBY8 286 aa7.76□□□□□ -1.17
HDAC3-215ENST00000519474 OR5V1Q9UGF6 321 aa7.76□□□□□ -1.17
HDAC3-215ENST00000519474 MPC1Q9Y5U8 109 aa7.76□□□□□ -1.17
HDAC3-215ENST00000519474 IGHV3OR16-10A0A075B7F0 116 aa7.75□□□□□ -1.17
HDAC3-215ENST00000519474 A0A0U1RQV5 110 aa7.75□□□□□ -1.17
HDAC3-215ENST00000519474 C22orf46C9J442 243 aa7.75□□□□□ -1.17
HDAC3-215ENST00000519474 TRIM77I1YAP6 450 aa7.75□□□□□ -1.17
HDAC3-215ENST00000519474 CDIPTO14735 213 aa7.75□□□□□ -1.17
HDAC3-215ENST00000519474 PHYHO14832 338 aa7.75□□□□□ -1.17
HDAC3-215ENST00000519474 ADAM20O43506 726 aa7.75□□□□□ -1.17
HDAC3-215ENST00000519474 IGHV4-38-2P0DP08 117 aa7.75□□□□□ -1.17
HDAC3-215ENST00000519474 FCGR1AP12314 374 aa7.75□□□□□ -1.17
HDAC3-215ENST00000519474 SELLP14151 372 aa7.75□□□□□ -1.17
HDAC3-215ENST00000519474 HTR2BP41595 481 aa7.75□□□□□ -1.17
HDAC3-215ENST00000519474 MAP2K3P46734 347 aa7.75□□□□□ -1.17
HDAC3-215ENST00000519474 TGM4P49221 684 aa7.75□□□□□ -1.17
HDAC3-215ENST00000519474 NPY4RP50391 375 aa7.75□□□□□ -1.17
HDAC3-215ENST00000519474 IL5RAQ01344 420 aa7.75□□□□□ -1.17
HDAC3-215ENST00000519474 KCNJ8Q15842 424 aa7.75□□□□□ -1.17
HDAC3-215ENST00000519474 DMRTC1Q5HYR2 192 aa7.75□□□□□ -1.17
HDAC3-215ENST00000519474 C6orf183Q5T699 404 aa7.75□□□□□ -1.17
HDAC3-215ENST00000519474 ATPAF1Q5TC12 328 aaPredicted RBP7.75□□□□□ -1.17
HDAC3-215ENST00000519474 BTNL3Q6UXE8 466 aa7.75□□□□□ -1.17
HDAC3-215ENST00000519474 DOK3Q7L591 496 aa7.75□□□□□ -1.17
HDAC3-215ENST00000519474 NLRC3Q7RTR2 1065 aa7.75□□□□□ -1.17
HDAC3-215ENST00000519474 SLC38A6Q8IZM9 456 aa7.75□□□□□ -1.17
HDAC3-215ENST00000519474 LINC00518Q8N0U6 118 aa7.75□□□□□ -1.17
HDAC3-215ENST00000519474 BPIFB2Q8N4F0 458 aa7.75□□□□□ -1.17
HDAC3-215ENST00000519474 SIGLECL1Q8N7X8 197 aa7.75□□□□□ -1.17
HDAC3-215ENST00000519474 SCCPDHQ8NBX0 429 aa7.75□□□□□ -1.17
HDAC3-215ENST00000519474 OR5T2Q8NGG2 359 aa7.75□□□□□ -1.17
HDAC3-215ENST00000519474 LRRC29Q8WV35 223 aa7.75□□□□□ -1.17
HDAC3-215ENST00000519474 ASB17Q8WXJ9 295 aa7.75□□□□□ -1.17
HDAC3-215ENST00000519474 RPL3LQ92901 407 aaKnown RBP7.75□□□□□ -1.17
HDAC3-215ENST00000519474 CCL13Q99616 98 aa7.75□□□□□ -1.17
HDAC3-215ENST00000519474 PKP2Q99959 881 aa7.75□□□□□ -1.17
HDAC3-215ENST00000519474 MICU1Q9BPX6 476 aa7.75□□□□□ -1.17
HDAC3-215ENST00000519474 PAPOLGQ9BWT3 736 aaKnown RBP7.75□□□□□ -1.17
HDAC3-215ENST00000519474 MROQ9BYG7 248 aa7.75□□□□□ -1.17
HDAC3-215ENST00000519474 PBOV1Q9GZY1 135 aa7.75□□□□□ -1.17
HDAC3-215ENST00000519474 ADGRL4Q9HBW9 690 aa7.75□□□□□ -1.17
HDAC3-215ENST00000519474 SMURF1Q9HCE7 757 aa7.75□□□□□ -1.17
HDAC3-215ENST00000519474 NUDT15Q9NV35 164 aa7.75□□□□□ -1.17
HDAC3-215ENST00000519474 ZNF391Q9UJN7 358 aa7.75□□□□□ -1.17
HDAC3-215ENST00000519474 TMEM14AQ9Y6G1 99 aa7.75□□□□□ -1.17
HDAC3-215ENST00000519474 A0A1B0GTI1 187 aa7.74□□□□□ -1.17
HDAC3-215ENST00000519474 hCG_1807616A0A1W2PRN6 198 aa7.74□□□□□ -1.17
HDAC3-215ENST00000519474 EFCAB10A6NFE3 127 aa7.74□□□□□ -1.17
HDAC3-215ENST00000519474 SAC3D1A6NKF1 404 aa7.74□□□□□ -1.17
HDAC3-215ENST00000519474 SLC22A31A6NKX4 558 aa7.74□□□□□ -1.17
HDAC3-215ENST00000519474 ANXA2P2A6NMY6 339 aa7.74□□□□□ -1.17
HDAC3-215ENST00000519474 SRRM5B3KS81 715 aa7.74□□□□□ -1.17
HDAC3-215ENST00000519474 E9PQ18 207 aa7.74□□□□□ -1.17
HDAC3-215ENST00000519474 H3BNX3 289 aa7.74□□□□□ -1.17
HDAC3-215ENST00000519474 DVL1O14640 695 aa7.74□□□□□ -1.17
HDAC3-215ENST00000519474 SSX5O60225 188 aa7.74□□□□□ -1.17
HDAC3-215ENST00000519474 RBBP9O75884 186 aa7.74□□□□□ -1.17
HDAC3-215ENST00000519474 TTRP02766 147 aa7.74□□□□□ -1.17
HDAC3-215ENST00000519474 LIPFP07098 398 aa7.74□□□□□ -1.17
HDAC3-215ENST00000519474 MMP9P14780 707 aa7.74□□□□□ -1.17
HDAC3-215ENST00000519474 MUC1P15941 1255 aaPredicted RBP7.74□□□□□ -1.17
HDAC3-215ENST00000519474 ATF4P18848 351 aaPredicted RBP7.74□□□□□ -1.17
HDAC3-215ENST00000519474 RIDAP52758 137 aaKnown RBP7.74□□□□□ -1.17
HDAC3-215ENST00000519474 PSMA6P60900 246 aaKnown RBP7.74□□□□□ -1.17
HDAC3-215ENST00000519474 CXCR4P61073 352 aa7.74□□□□□ -1.17
HDAC3-215ENST00000519474 ACTR3P61158 418 aa7.74□□□□□ -1.17
HDAC3-215ENST00000519474 FGF12P61328 243 aa7.74□□□□□ -1.17
HDAC3-215ENST00000519474 UBA52P62987 128 aaKnown RBP7.74□□□□□ -1.17
HDAC3-215ENST00000519474 DCTN2Q13561 401 aaKnown RBP7.74□□□□□ -1.17
HDAC3-215ENST00000519474 MICBQ29980 383 aa7.74□□□□□ -1.17
HDAC3-215ENST00000519474 ARMCX4Q5H9R4 360 aa7.74□□□□□ -1.17
HDAC3-215ENST00000519474 ZNF684Q5T5D7 378 aa7.74□□□□□ -1.17
HDAC3-215ENST00000519474 LCN1P1Q5VSP4 162 aa7.74□□□□□ -1.17
HDAC3-215ENST00000519474 CD276Q5ZPR3 534 aa7.74□□□□□ -1.17
HDAC3-215ENST00000519474 ZNF322Q6U7Q0 402 aaPredicted RBP7.74□□□□□ -1.17
HDAC3-215ENST00000519474 MOB3CQ70IA8 216 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms