RNA–Protein interactions for RNA: ENST00000519120.1

MRPS28-204, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 403 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-204ENST00000519120 COPS3Q9UNS2 423 aa12.96□□□□□ -0.33
MRPS28-204ENST00000519120 FAM96BQ9Y3D0 163 aa12.96□□□□□ -0.33
MRPS28-204ENST00000519120 TRBV23-1A0A0A0MS06 115 aa12.95□□□□□ -0.34
MRPS28-204ENST00000519120 DHRS7CA6NNS2 312 aa12.95□□□□□ -0.34
MRPS28-204ENST00000519120 ZAR1LA6NP61 321 aa12.95□□□□□ -0.34
MRPS28-204ENST00000519120 PRR32B1ATL7 298 aa12.95□□□□□ -0.34
MRPS28-204ENST00000519120 RNASEK-C17orf49H0YIS7 233 aa12.95□□□□□ -0.34
MRPS28-204ENST00000519120 PSMD9O00233 223 aa12.95□□□□□ -0.34
MRPS28-204ENST00000519120 SRSF10O75494 262 aaKnown RBP12.95□□□□□ -0.34
MRPS28-204ENST00000519120 RHBDL1O75783 438 aa12.95□□□□□ -0.34
MRPS28-204ENST00000519120 TTRP02766 147 aa12.95□□□□□ -0.34
MRPS28-204ENST00000519120 SELLP14151 372 aa12.95□□□□□ -0.34
MRPS28-204ENST00000519120 ACSM1Q08AH1 577 aa12.95□□□□□ -0.34
MRPS28-204ENST00000519120 ATP6AP1Q15904 470 aa12.95□□□□□ -0.34
MRPS28-204ENST00000519120 AADACL4Q5VUY2 407 aa12.95□□□□□ -0.34
MRPS28-204ENST00000519120 NCR3LG1Q68D85 454 aa12.95□□□□□ -0.34
MRPS28-204ENST00000519120 C17orf107Q6ZR85 190 aa12.95□□□□□ -0.34
MRPS28-204ENST00000519120 Q6ZSR3 168 aa12.95□□□□□ -0.34
MRPS28-204ENST00000519120 COMMD2Q86X83 199 aa12.95□□□□□ -0.34
MRPS28-204ENST00000519120 TMEM163Q8TC26 289 aa12.95□□□□□ -0.34
MRPS28-204ENST00000519120 OR51E1Q8TCB6 317 aa12.95□□□□□ -0.34
MRPS28-204ENST00000519120 H1FXQ92522 213 aaKnown RBP12.95□□□□□ -0.34
MRPS28-204ENST00000519120 TNFRSF14Q92956 283 aa12.95□□□□□ -0.34
MRPS28-204ENST00000519120 SDSLQ96GA7 329 aa12.95□□□□□ -0.34
MRPS28-204ENST00000519120 CITED1Q99966 193 aa12.95□□□□□ -0.34
MRPS28-204ENST00000519120 CADM1Q9BY67 442 aaKnown RBP12.95□□□□□ -0.34
MRPS28-204ENST00000519120 METTL8Q9H825 291 aaKnown RBP12.95□□□□□ -0.34
MRPS28-204ENST00000519120 SIRT7Q9NRC8 400 aa12.95□□□□□ -0.34
MRPS28-204ENST00000519120 KRT84Q9NSB2 600 aa12.95□□□□□ -0.34
MRPS28-204ENST00000519120 ZNRD1Q9P1U0 126 aa12.95□□□□□ -0.34
MRPS28-204ENST00000519120 ENOPH1Q9UHY7 261 aa12.95□□□□□ -0.34
MRPS28-204ENST00000519120 ENPP5Q9UJA9 477 aa12.95□□□□□ -0.34
MRPS28-204ENST00000519120 IGKV1D-17A0A075B6S4 117 aa12.94□□□□□ -0.34
MRPS28-204ENST00000519120 G3V2T6 193 aa12.94□□□□□ -0.34
MRPS28-204ENST00000519120 NPFFO15130 113 aa12.94□□□□□ -0.34
MRPS28-204ENST00000519120 PSG2P11465 335 aa12.94□□□□□ -0.34
MRPS28-204ENST00000519120 UBE2E1P51965 193 aa12.94□□□□□ -0.34
MRPS28-204ENST00000519120 GMFBP60983 142 aa12.94□□□□□ -0.34
MRPS28-204ENST00000519120 EGR3Q06889 387 aa12.94□□□□□ -0.34
MRPS28-204ENST00000519120 BNIP1Q12981 228 aa12.94□□□□□ -0.34
MRPS28-204ENST00000519120 BLMHQ13867 455 aa12.94□□□□□ -0.34
MRPS28-204ENST00000519120 CEP78Q5JTW2 689 aa12.94□□□□□ -0.34
MRPS28-204ENST00000519120 TMEM42Q69YG0 159 aa12.94□□□□□ -0.34
MRPS28-204ENST00000519120 C12orf73Q69YU5 71 aa12.94□□□□□ -0.34
MRPS28-204ENST00000519120 KDM4DQ6B0I6 523 aa12.94□□□□□ -0.34
MRPS28-204ENST00000519120 ZNF322Q6U7Q0 402 aaPredicted RBP12.94□□□□□ -0.34
MRPS28-204ENST00000519120 GID4Q8IVV7 300 aa12.94□□□□□ -0.34
MRPS28-204ENST00000519120 POC1AQ8NBT0 407 aa12.94□□□□□ -0.34
MRPS28-204ENST00000519120 GABARAPL1Q9H0R8 117 aa12.94□□□□□ -0.34
MRPS28-204ENST00000519120 CLN6Q9NWW5 311 aa12.94□□□□□ -0.34
MRPS28-204ENST00000519120 H2AFY2Q9P0M6 372 aaPredicted RBP12.94□□□□□ -0.34
MRPS28-204ENST00000519120 IKZF2Q9UKS7 526 aa12.94□□□□□ -0.34
MRPS28-204ENST00000519120 PIGLQ9Y2B2 252 aa12.94□□□□□ -0.34
MRPS28-204ENST00000519120 MAB21L2Q9Y586 359 aa12.94□□□□□ -0.34
MRPS28-204ENST00000519120 BTBD17A6NE02 478 aa12.93□□□□□ -0.34
MRPS28-204ENST00000519120 ZNF670-ZNF695F2Z2N8 137 aa12.93□□□□□ -0.34
MRPS28-204ENST00000519120 LOC110117498-PIK3R3F6TDL0 507 aa12.93□□□□□ -0.34
MRPS28-204ENST00000519120 DLGAP1O14490 977 aa12.93□□□□□ -0.34
MRPS28-204ENST00000519120 WIPF1O43516 503 aa12.93□□□□□ -0.34
MRPS28-204ENST00000519120 NOS1APO75052 506 aaPredicted RBP12.93□□□□□ -0.34
MRPS28-204ENST00000519120 NRASP01111 189 aa12.93□□□□□ -0.34
MRPS28-204ENST00000519120 FAHP16930 419 aa12.93□□□□□ -0.34
MRPS28-204ENST00000519120 NDUFB7P17568 137 aa12.93□□□□□ -0.34
MRPS28-204ENST00000519120 RASSF2P50749 326 aa12.93□□□□□ -0.34
MRPS28-204ENST00000519120 CXCR4P61073 352 aa12.93□□□□□ -0.34
MRPS28-204ENST00000519120 MFGE8Q08431 387 aaPredicted RBP12.93□□□□□ -0.34
MRPS28-204ENST00000519120 SMIM21Q3B7S5 101 aa12.93□□□□□ -0.34
MRPS28-204ENST00000519120 ZNF684Q5T5D7 378 aa12.93□□□□□ -0.34
MRPS28-204ENST00000519120 PLCXD3Q63HM9 321 aa12.93□□□□□ -0.34
MRPS28-204ENST00000519120 HAGHLQ6PII5 290 aaPredicted RBP12.93□□□□□ -0.34
MRPS28-204ENST00000519120 MOB3CQ70IA8 216 aa12.93□□□□□ -0.34
MRPS28-204ENST00000519120 ZNF573Q86YE8 665 aa12.93□□□□□ -0.34
MRPS28-204ENST00000519120 ZDHHC13Q8IUH4 622 aa12.93□□□□□ -0.34
MRPS28-204ENST00000519120 PDZD9Q8IXQ8 264 aa12.93□□□□□ -0.34
MRPS28-204ENST00000519120 SLC35F2Q8IXU6 374 aa12.93□□□□□ -0.34
MRPS28-204ENST00000519120 ELMOD2Q8IZ81 293 aa12.93□□□□□ -0.34
MRPS28-204ENST00000519120 TCEANCQ8N8B7 351 aa12.93□□□□□ -0.34
MRPS28-204ENST00000519120 ZSCAN4Q8NAM6 433 aaPredicted RBP12.93□□□□□ -0.34
MRPS28-204ENST00000519120 OR5D13Q8NGL4 314 aa12.93□□□□□ -0.34
MRPS28-204ENST00000519120 OR5R1Q8NH85 324 aa12.93□□□□□ -0.34
MRPS28-204ENST00000519120 LINC01006Q8NI28 216 aa12.93□□□□□ -0.34
MRPS28-204ENST00000519120 DUS3LQ96G46 650 aaKnown RBP12.93□□□□□ -0.34
MRPS28-204ENST00000519120 ADGRL4Q9HBW9 690 aa12.93□□□□□ -0.34
MRPS28-204ENST00000519120 VPREB3Q9UKI3 123 aa12.93□□□□□ -0.34
MRPS28-204ENST00000519120 R4GMQ9 66 aa12.93□□□□□ -0.34
MRPS28-204ENST00000519120 V9GYS6 101 aa12.93□□□□□ -0.34
MRPS28-204ENST00000519120 A0A1W2PQ09 198 aa12.92□□□□□ -0.34
MRPS28-204ENST00000519120 J3QT63 122 aa12.92□□□□□ -0.34
MRPS28-204ENST00000519120 CLPXO76031 633 aa12.92□□□□□ -0.34
MRPS28-204ENST00000519120 FCGR1AP12314 374 aa12.92□□□□□ -0.34
MRPS28-204ENST00000519120 FASP25445 335 aa12.92□□□□□ -0.34
MRPS28-204ENST00000519120 SAA4P35542 130 aa12.92□□□□□ -0.34
MRPS28-204ENST00000519120 GABRA2P47869 451 aa12.92□□□□□ -0.34
MRPS28-204ENST00000519120 TAF9Q16594 264 aa12.92□□□□□ -0.34
MRPS28-204ENST00000519120 CLVS2Q5SYC1 327 aa12.92□□□□□ -0.34
MRPS28-204ENST00000519120 BCL2L15Q5TBC7 163 aa12.92□□□□□ -0.34
MRPS28-204ENST00000519120 ACP7Q6ZNF0 438 aa12.92□□□□□ -0.34
MRPS28-204ENST00000519120 ZNRF1Q8ND25 227 aa12.92□□□□□ -0.34
MRPS28-204ENST00000519120 C16orf95Q9H693 158 aa12.92□□□□□ -0.34
MRPS28-204ENST00000519120 OR52A1Q9UKL2 312 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms