RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 RAB22AQ9UL26 194 aa2.24□□□□□ -2.05
SQLE-202ENST00000518604 AQRO60306 1485 aaKnown RBP eCLIP2.23□□□□□ -2.05
SQLE-202ENST00000518604 IGKV2-24A0A0C4DH68 120 aa2.23□□□□□ -2.05
SQLE-202ENST00000518604 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.23□□□□□ -2.05
SQLE-202ENST00000518604 SNAI1O95863 264 aaPredicted RBP2.23□□□□□ -2.05
SQLE-202ENST00000518604 TGFBR1P36897 503 aa2.23□□□□□ -2.05
SQLE-202ENST00000518604 TGM4P49221 684 aa2.23□□□□□ -2.05
SQLE-202ENST00000518604 TAS2R60P59551 318 aa2.23□□□□□ -2.05
SQLE-202ENST00000518604 BIKQ13323 160 aa2.23□□□□□ -2.05
SQLE-202ENST00000518604 WDR43Q15061 677 aaKnown RBP eCLIP2.23□□□□□ -2.05
SQLE-202ENST00000518604 HSP90AA4PQ58FG1 418 aa2.23□□□□□ -2.05
SQLE-202ENST00000518604 CPTPQ5TA50 214 aa2.23□□□□□ -2.05
SQLE-202ENST00000518604 TBPL2Q6SJ96 375 aa2.23□□□□□ -2.05
SQLE-202ENST00000518604 TMEM136Q6ZRR5 245 aa2.23□□□□□ -2.05
SQLE-202ENST00000518604 FBXO36Q8NEA4 188 aa2.23□□□□□ -2.05
SQLE-202ENST00000518604 OR2M7Q8NG81 312 aa2.23□□□□□ -2.05
SQLE-202ENST00000518604 TCP10LQ8TDR4 215 aa2.23□□□□□ -2.05
SQLE-202ENST00000518604 BAALCQ8WXS3 180 aa2.23□□□□□ -2.05
SQLE-202ENST00000518604 TSNAXQ99598 290 aaKnown RBP2.23□□□□□ -2.05
SQLE-202ENST00000518604 SEC22CQ9BRL7 303 aa2.23□□□□□ -2.05
SQLE-202ENST00000518604 OR2AG1Q9H205 316 aa2.23□□□□□ -2.05
SQLE-202ENST00000518604 CYP3A43Q9HB55 503 aa2.23□□□□□ -2.05
SQLE-202ENST00000518604 C6orf50Q9HD87 102 aa2.23□□□□□ -2.05
SQLE-202ENST00000518604 LZTFL1Q9NQ48 299 aa2.23□□□□□ -2.05
SQLE-202ENST00000518604 IFNKQ9P0W0 207 aa2.23□□□□□ -2.05
SQLE-202ENST00000518604 CFL2Q9Y281 166 aa2.23□□□□□ -2.05
SQLE-202ENST00000518604 LOC102724200A0A096LPH7 203 aaPredicted RBP2.22□□□□□ -2.05
SQLE-202ENST00000518604 IGKV3D-11A0A0A0MRZ8 115 aa2.22□□□□□ -2.05
SQLE-202ENST00000518604 IGKV1-6A0A0C4DH72 117 aa2.22□□□□□ -2.05
SQLE-202ENST00000518604 H7C2Y5 167 aa2.22□□□□□ -2.05
SQLE-202ENST00000518604 GATCO43716 136 aaKnown RBP2.22□□□□□ -2.05
SQLE-202ENST00000518604 CNMDO75829 334 aa2.22□□□□□ -2.05
SQLE-202ENST00000518604 IGKV1-39P01597 117 aa2.22□□□□□ -2.05
SQLE-202ENST00000518604 IGHV1-46P01743 117 aa2.22□□□□□ -2.05
SQLE-202ENST00000518604 IGKV1D-39P04432 117 aa2.22□□□□□ -2.05
SQLE-202ENST00000518604 PFN1P07737 140 aaKnown RBP2.22□□□□□ -2.05
SQLE-202ENST00000518604 HOXB8P17481 243 aaPredicted RBP2.22□□□□□ -2.05
SQLE-202ENST00000518604 PSMB2P49721 201 aa2.22□□□□□ -2.05
SQLE-202ENST00000518604 HCCSP53701 268 aa2.22□□□□□ -2.05
SQLE-202ENST00000518604 SLC35B1P78383 322 aa2.22□□□□□ -2.05
SQLE-202ENST00000518604 ADIGQ0VDE8 80 aa2.22□□□□□ -2.05
SQLE-202ENST00000518604 FAM53BQ14153 422 aa2.22□□□□□ -2.05
SQLE-202ENST00000518604 TMEM69Q5SWH9 247 aa2.22□□□□□ -2.05
SQLE-202ENST00000518604 ZNF678Q5SXM1 525 aa2.22□□□□□ -2.05
SQLE-202ENST00000518604 SGPP2Q8IWX5 399 aa2.22□□□□□ -2.05
SQLE-202ENST00000518604 ORAOV1Q8WV07 137 aa2.22□□□□□ -2.05
SQLE-202ENST00000518604 ING5Q8WYH8 240 aa2.22□□□□□ -2.05
SQLE-202ENST00000518604 YIPF5Q969M3 257 aa2.22□□□□□ -2.05
SQLE-202ENST00000518604 ZNF707Q96C28 371 aaPredicted RBP2.22□□□□□ -2.05
SQLE-202ENST00000518604 GABRG3Q99928 467 aa2.22□□□□□ -2.05
SQLE-202ENST00000518604 ANGPTL4Q9BY76 406 aa2.22□□□□□ -2.05
SQLE-202ENST00000518604 TMEM100Q9NV29 134 aa2.22□□□□□ -2.05
SQLE-202ENST00000518604 STX18Q9P2W9 335 aaKnown RBP2.22□□□□□ -2.05
SQLE-202ENST00000518604 PPIL1Q9Y3C6 166 aa2.22□□□□□ -2.05
SQLE-202ENST00000518604 KLF12Q9Y4X4 402 aa2.22□□□□□ -2.05
SQLE-202ENST00000518604 J3QT63 122 aa2.21□□□□□ -2.06
SQLE-202ENST00000518604 TRAPPC6AO75865 159 aa2.21□□□□□ -2.06
SQLE-202ENST00000518604 TSPOAP1O95153 1857 aa2.21□□□□□ -2.06
SQLE-202ENST00000518604 ETHE1O95571 254 aa2.21□□□□□ -2.06
SQLE-202ENST00000518604 PTTG1O95997 202 aa2.21□□□□□ -2.06
SQLE-202ENST00000518604 OR4Q2P0C623 313 aa2.21□□□□□ -2.06
SQLE-202ENST00000518604 GRB2P62993 217 aaKnown RBP2.21□□□□□ -2.06
SQLE-202ENST00000518604 ZNF235Q14590 738 aa2.21□□□□□ -2.06
SQLE-202ENST00000518604 ATP6V1FQ16864 119 aa2.21□□□□□ -2.06
SQLE-202ENST00000518604 MRPL2Q5T653 305 aaKnown RBP2.21□□□□□ -2.06
SQLE-202ENST00000518604 APOBEC3HQ6NTF7 200 aaKnown RBP2.21□□□□□ -2.06
SQLE-202ENST00000518604 DAZ4Q86SG3 579 aaKnown RBP2.21□□□□□ -2.06
SQLE-202ENST00000518604 TVP23CQ96ET8 276 aa2.21□□□□□ -2.06
SQLE-202ENST00000518604 ZBED3Q96IU2 234 aaPredicted RBP2.21□□□□□ -2.06
SQLE-202ENST00000518604 MS4A8Q9BY19 250 aa2.21□□□□□ -2.06
SQLE-202ENST00000518604 DAZ1Q9NQZ3 744 aaKnown RBP2.21□□□□□ -2.06
SQLE-202ENST00000518604 CA10Q9NS85 328 aa2.21□□□□□ -2.06
SQLE-202ENST00000518604 ZMAT5Q9UDW3 170 aaKnown RBP2.21□□□□□ -2.06
SQLE-202ENST00000518604 TFR2Q9UP52 801 aa2.21□□□□□ -2.06
SQLE-202ENST00000518604 SLC7A11Q9UPY5 501 aa2.21□□□□□ -2.06
SQLE-202ENST00000518604 ENPP4Q9Y6X5 453 aa2.21□□□□□ -2.06
SQLE-202ENST00000518604 SCN4AP35499 1836 aa2.21□□□□□ -2.06
SQLE-202ENST00000518604 TICRRQ7Z2Z1 1910 aa2.21□□□□□ -2.06
SQLE-202ENST00000518604 A0A0J9YYE9 177 aa2.2□□□□□ -2.06
SQLE-202ENST00000518604 A0A1W2PPV4 95 aa2.2□□□□□ -2.06
SQLE-202ENST00000518604 NDUFS5O43920 106 aa2.2□□□□□ -2.06
SQLE-202ENST00000518604 PLEKHA8P1O95397 391 aa2.2□□□□□ -2.06
SQLE-202ENST00000518604 FSTL3O95633 263 aa2.2□□□□□ -2.06
SQLE-202ENST00000518604 TRBC1P01850 177 aa2.2□□□□□ -2.06
SQLE-202ENST00000518604 SNRPAP09012 282 aaKnown RBP2.2□□□□□ -2.06
SQLE-202ENST00000518604 OR5AL1P0C617 328 aa2.2□□□□□ -2.06
SQLE-202ENST00000518604 HLA-GP17693 338 aa2.2□□□□□ -2.06
SQLE-202ENST00000518604 CD34P28906 385 aa2.2□□□□□ -2.06
SQLE-202ENST00000518604 GNRHRP30968 328 aa2.2□□□□□ -2.06
SQLE-202ENST00000518604 RGS6P49758 472 aa2.2□□□□□ -2.06
SQLE-202ENST00000518604 ATP5G2Q06055 141 aa2.2□□□□□ -2.06
SQLE-202ENST00000518604 MEF2CQ06413 473 aaPredicted RBP2.2□□□□□ -2.06
SQLE-202ENST00000518604 TOMM34Q15785 309 aaPredicted RBP2.2□□□□□ -2.06
SQLE-202ENST00000518604 CDNFQ49AH0 187 aa2.2□□□□□ -2.06
SQLE-202ENST00000518604 NKAIN1Q4KMZ8 207 aa2.2□□□□□ -2.06
SQLE-202ENST00000518604 TRMT10CQ7L0Y3 403 aaKnown RBP2.2□□□□□ -2.06
SQLE-202ENST00000518604 ZCCHC24Q8N2G6 241 aaKnown RBP2.2□□□□□ -2.06
SQLE-202ENST00000518604 CYB561A3Q8NBI2 242 aa2.2□□□□□ -2.06
SQLE-202ENST00000518604 ZNF420Q8TAQ5 688 aaPredicted RBP2.2□□□□□ -2.06
SQLE-202ENST00000518604 TFGQ92734 400 aaPredicted RBP2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms