RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 ATP6V1G2O95670 118 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 CA1P00915 261 aaPredicted RBP2.45□□□□□ -2.02
VPS13B-207ENST00000518569 RLN2P04090 185 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 TCRBP04435 133 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 IFNA16P05015 189 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 GUSBP08236 651 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 C8orf88P0DMB2 117 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 IFI30P13284 250 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 HLA-GP17693 338 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 CSNK2A2P19784 350 aaPredicted RBP2.45□□□□□ -2.02
VPS13B-207ENST00000518569 COILP38432 576 aaPredicted RBP2.45□□□□□ -2.02
VPS13B-207ENST00000518569 ACOT2P49753 483 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 RHOAP61586 193 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 LSM6P62312 80 aaKnown RBP2.45□□□□□ -2.02
VPS13B-207ENST00000518569 FAM3AP98173 230 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 C2orf80Q0P641 193 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 TPBGQ13641 420 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 GNMTQ14749 295 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 ZBTB6Q15916 424 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 DGUOKQ16854 277 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 DMRTC1Q5HYR2 192 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 FRMPD2BQ6IN97 320 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 DRAM2Q6UX65 266 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 GDPD3Q7L5L3 318 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 DHFR2Q86XF0 187 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 PHF13Q86YI8 300 aaPredicted RBP2.45□□□□□ -2.02
VPS13B-207ENST00000518569 LGI3Q8N145 548 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 STX19Q8N4C7 294 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 OR2Y1Q8NGV0 311 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 OR11L1Q8NGX0 322 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 OR6X1Q8NH79 312 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 PLPPR1Q8TBJ4 325 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 FAM110BQ8TC76 370 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 ACTRT1Q8TDG2 376 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 DOK4Q8TEW6 326 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 TFGQ92734 400 aaPredicted RBP2.45□□□□□ -2.02
VPS13B-207ENST00000518569 BTF3L4Q96K17 158 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 PRAP1Q96NZ9 151 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 SERPINB12Q96P63 405 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 OR5B12Q96R08 314 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 KLHDC3Q9BQ90 382 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 NIPSNAP3BQ9BS92 247 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 HES7Q9BYE0 225 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 ARL6Q9H0F7 186 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 ALX4Q9H161 411 aaPredicted RBP2.45□□□□□ -2.02
VPS13B-207ENST00000518569 NANOGQ9H9S0 305 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 PRSS16Q9NQE7 514 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 SDHAF2Q9NX18 166 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 THUMPD1Q9NXG2 353 aaKnown RBP2.45□□□□□ -2.02
VPS13B-207ENST00000518569 ENOPH1Q9UHY7 261 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 FBXL3Q9UKT7 428 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 SLC17A4Q9Y2C5 497 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 YARS2Q9Y2Z4 477 aaKnown RBP2.45□□□□□ -2.02
VPS13B-207ENST00000518569 EFCAB6Q5THR3 1501 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 CASZ1Q86V15 1759 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 MROH1Q8NDA8 1641 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 COL22A1Q8NFW1 1626 aaPredicted RBP2.45□□□□□ -2.02
VPS13B-207ENST00000518569 CEMIPQ8WUJ3 1361 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 ABCC11Q96J66 1382 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 THSD7BQ9C0I4 1608 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 PTPN23Q9H3S7 1636 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 NWD2Q9ULI1 1742 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 CAMSAP2Q08AD1 1489 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 PRXQ9BXM0 1461 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 SBF2Q86WG5 1849 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 TET3O43151 1660 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 ATRNO75882 1429 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.44□□□□□ -2.02
VPS13B-207ENST00000518569 NSG1A0A0A6YYJ2 146 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 GLYATL1P3A0A0U1RQE8 302 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 A0A1W2PPV9 198 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 ANKRD20A5PA0PJZ0 165 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 TSPAN11A1L157 253 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 VSTM2BA6NLU5 285 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 EFCAB9A8MZ26 197 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 G3V4G9 280 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 PPP1R2P9O14990 202 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 RGS16O15492 202 aaPredicted RBP2.44□□□□□ -2.02
VPS13B-207ENST00000518569 SHOX2O60902 331 aaPredicted RBP2.44□□□□□ -2.02
VPS13B-207ENST00000518569 PFDN1O60925 122 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 MPDU1O75352 247 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 CCNKO75909 580 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 AQP8O94778 261 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 SUPT7LO94864 414 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 VAMP5O95183 116 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 BRI3O95415 125 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 OXSR1O95747 527 aaPredicted RBP2.44□□□□□ -2.02
VPS13B-207ENST00000518569 TSPAN13O95857 204 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 COX4I1P13073 169 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 MDKP21741 143 aaPredicted RBP2.44□□□□□ -2.02
VPS13B-207ENST00000518569 F2RP25116 425 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 NSG1P42857 185 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 ZNF133P52736 654 aaPredicted RBP2.44□□□□□ -2.02
VPS13B-207ENST00000518569 APOC4P55056 127 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 ESRRGP62508 458 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 HMGCS1Q01581 520 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 TAF1AQ15573 450 aaPredicted RBP2.44□□□□□ -2.02
VPS13B-207ENST00000518569 TSNQ15631 228 aaKnown RBP2.44□□□□□ -2.02
VPS13B-207ENST00000518569 PSMD5Q16401 504 aa2.44□□□□□ -2.02
VPS13B-207ENST00000518569 KRTAP13-3Q3SY46 172 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms