RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 ZDHHC22Q8N966 263 aa-2.89□□□□□ -2.87
RNU6-539P-201ENST00000516665 C12orf29Q8N999 325 aa-2.89□□□□□ -2.87
RNU6-539P-201ENST00000516665 Q8NFD4 153 aa-2.89□□□□□ -2.87
RNU6-539P-201ENST00000516665 SGMS2Q8NHU3 365 aa-2.89□□□□□ -2.87
RNU6-539P-201ENST00000516665 DCAKDQ8WVC6 231 aa-2.89□□□□□ -2.87
RNU6-539P-201ENST00000516665 PYURFQ96I23 114 aa-2.89□□□□□ -2.87
RNU6-539P-201ENST00000516665 CPB2Q96IY4 423 aa-2.89□□□□□ -2.87
RNU6-539P-201ENST00000516665 QKIQ96PU8 341 aaKnown RBP eCLIP-2.89□□□□□ -2.87
RNU6-539P-201ENST00000516665 FAM213AQ9BRX8 229 aa-2.89□□□□□ -2.87
RNU6-539P-201ENST00000516665 KIFC1Q9BW19 673 aa-2.89□□□□□ -2.87
RNU6-539P-201ENST00000516665 ACP6Q9NPH0 428 aa-2.89□□□□□ -2.87
RNU6-539P-201ENST00000516665 TXNL4BQ9NX01 149 aaKnown RBP-2.89□□□□□ -2.87
RNU6-539P-201ENST00000516665 LRP5LA4QPB2 252 aa-2.9□□□□□ -2.87
RNU6-539P-201ENST00000516665 ZNF879B4DU55 563 aa-2.9□□□□□ -2.87
RNU6-539P-201ENST00000516665 ZBTB5O15062 677 aa-2.9□□□□□ -2.87
RNU6-539P-201ENST00000516665 SOD1P00441 154 aa-2.9□□□□□ -2.87
RNU6-539P-201ENST00000516665 IGLV3-1P01715 115 aa-2.9□□□□□ -2.87
RNU6-539P-201ENST00000516665 ZNF93P35789 620 aaPredicted RBP-2.9□□□□□ -2.87
RNU6-539P-201ENST00000516665 ATP5C1P36542 298 aaKnown RBP-2.9□□□□□ -2.87
RNU6-539P-201ENST00000516665 QARSP47897 775 aaKnown RBP-2.9□□□□□ -2.87
RNU6-539P-201ENST00000516665 ZNF80P51504 273 aaPredicted RBP-2.9□□□□□ -2.87
RNU6-539P-201ENST00000516665 IFI44LQ53G44 452 aa-2.9□□□□□ -2.87
RNU6-539P-201ENST00000516665 HSP90AA5PQ58FG0 334 aa-2.9□□□□□ -2.87
RNU6-539P-201ENST00000516665 FAM180BQ6P0A1 224 aa-2.9□□□□□ -2.87
RNU6-539P-201ENST00000516665 ANKRD23Q86SG2 305 aa-2.9□□□□□ -2.87
RNU6-539P-201ENST00000516665 GKN2Q86XP6 184 aa-2.9□□□□□ -2.87
RNU6-539P-201ENST00000516665 ITPRIPQ8IWB1 547 aa-2.9□□□□□ -2.87
RNU6-539P-201ENST00000516665 MINDY2Q8NBR6 621 aa-2.9□□□□□ -2.87
RNU6-539P-201ENST00000516665 TMEM222Q9H0R3 208 aa-2.9□□□□□ -2.87
RNU6-539P-201ENST00000516665 PSMD13Q9UNM6 376 aa-2.9□□□□□ -2.87
RNU6-539P-201ENST00000516665 TDRKHQ9Y2W6 561 aaKnown RBP-2.9□□□□□ -2.87
RNU6-539P-201ENST00000516665 GMEB1Q9Y692 573 aa-2.9□□□□□ -2.87
RNU6-539P-201ENST00000516665 TACC2O95359 2948 aa-2.9□□□□□ -2.87
RNU6-539P-201ENST00000516665 ZNF816-ZNF321PA0A0X1KG74 233 aa-2.91□□□□□ -2.88
RNU6-539P-201ENST00000516665 LOC100653049A0A140TA62 436 aa-2.91□□□□□ -2.88
RNU6-539P-201ENST00000516665 C11orf86A6NJI1 115 aa-2.91□□□□□ -2.88
RNU6-539P-201ENST00000516665 KRT34O76011 436 aa-2.91□□□□□ -2.88
RNU6-539P-201ENST00000516665 HLA-AP01891 365 aaKnown RBP-2.91□□□□□ -2.88
RNU6-539P-201ENST00000516665 C1QAP02745 245 aa-2.91□□□□□ -2.88
RNU6-539P-201ENST00000516665 LDHCP07864 332 aa-2.91□□□□□ -2.88
RNU6-539P-201ENST00000516665 CRABP1P29762 137 aa-2.91□□□□□ -2.88
RNU6-539P-201ENST00000516665 FDFT1P37268 417 aa-2.91□□□□□ -2.88
RNU6-539P-201ENST00000516665 NUDT2P50583 147 aa-2.91□□□□□ -2.88
RNU6-539P-201ENST00000516665 PLTPP55058 493 aa-2.91□□□□□ -2.88
RNU6-539P-201ENST00000516665 FXYD6P3P58550 94 aa-2.91□□□□□ -2.88
RNU6-539P-201ENST00000516665 LASP1Q14847 261 aaKnown RBP-2.91□□□□□ -2.88
RNU6-539P-201ENST00000516665 CARTPTQ16568 116 aa-2.91□□□□□ -2.88
RNU6-539P-201ENST00000516665 KLK9Q2XQG4 91 aa-2.91□□□□□ -2.88
RNU6-539P-201ENST00000516665 ARHGAP11BQ3KRB8 267 aa-2.91□□□□□ -2.88
RNU6-539P-201ENST00000516665 HSP90AB3PQ58FF7 597 aa-2.91□□□□□ -2.88
RNU6-539P-201ENST00000516665 C1orf220Q5T0J3 134 aa-2.91□□□□□ -2.88
RNU6-539P-201ENST00000516665 CCDC186Q7Z3E2 898 aa-2.91□□□□□ -2.88
RNU6-539P-201ENST00000516665 ECHDC2Q86YB7 292 aa-2.91□□□□□ -2.88
RNU6-539P-201ENST00000516665 SLC22A9Q8IVM8 553 aa-2.91□□□□□ -2.88
RNU6-539P-201ENST00000516665 SLC22A24Q8N4F4 322 aa-2.91□□□□□ -2.88
RNU6-539P-201ENST00000516665 PRELID2Q8N945 189 aa-2.91□□□□□ -2.88
RNU6-539P-201ENST00000516665 OR4C6Q8NH72 309 aa-2.91□□□□□ -2.88
RNU6-539P-201ENST00000516665 TCP10LQ8TDR4 215 aa-2.91□□□□□ -2.88
RNU6-539P-201ENST00000516665 ACMSDQ8TDX5 336 aa-2.91□□□□□ -2.88
RNU6-539P-201ENST00000516665 CYGBQ8WWM9 190 aa-2.91□□□□□ -2.88
RNU6-539P-201ENST00000516665 CDS1Q92903 461 aa-2.91□□□□□ -2.88
RNU6-539P-201ENST00000516665 MYLPFQ96A32 169 aa-2.91□□□□□ -2.88
RNU6-539P-201ENST00000516665 ADTRPQ96IZ2 230 aa-2.91□□□□□ -2.88
RNU6-539P-201ENST00000516665 THTPAQ9BU02 230 aa-2.91□□□□□ -2.88
RNU6-539P-201ENST00000516665 ATG10Q9H0Y0 220 aa-2.91□□□□□ -2.88
RNU6-539P-201ENST00000516665 RPRD1BQ9NQG5 326 aaKnown RBP-2.91□□□□□ -2.88
RNU6-539P-201ENST00000516665 HOMER3Q9NSC5 361 aa-2.91□□□□□ -2.88
RNU6-539P-201ENST00000516665 AGPAT5Q9NUQ2 364 aa-2.91□□□□□ -2.88
RNU6-539P-201ENST00000516665 MAD2L2Q9UI95 211 aa-2.91□□□□□ -2.88
RNU6-539P-201ENST00000516665 LINC00588Q9Y4M8 146 aa-2.91□□□□□ -2.88
RNU6-539P-201ENST00000516665 PKHD1L1Q86WI1 4243 aa-2.92□□□□□ -2.88
RNU6-539P-201ENST00000516665 PCDH11XQ9BZA7 1347 aa-2.92□□□□□ -2.88
RNU6-539P-201ENST00000516665 MED13LQ71F56 2210 aa-2.92□□□□□ -2.88
RNU6-539P-201ENST00000516665 NAV1Q8NEY1 1877 aa-2.92□□□□□ -2.88
RNU6-539P-201ENST00000516665 PDZK1P1A8MUH7 402 aa-2.92□□□□□ -2.88
RNU6-539P-201ENST00000516665 C5orf67F2Z3F1 127 aa-2.92□□□□□ -2.88
RNU6-539P-201ENST00000516665 M0R2N4 97 aa-2.92□□□□□ -2.88
RNU6-539P-201ENST00000516665 CCL21O00585 134 aa-2.92□□□□□ -2.88
RNU6-539P-201ENST00000516665 AP2A1O95782 977 aa-2.92□□□□□ -2.88
RNU6-539P-201ENST00000516665 P2RY1P47900 373 aa-2.92□□□□□ -2.88
RNU6-539P-201ENST00000516665 SLC18A1P54219 525 aa-2.92□□□□□ -2.88
RNU6-539P-201ENST00000516665 IFITM3Q01628 133 aa-2.92□□□□□ -2.88
RNU6-539P-201ENST00000516665 BIRC2Q13490 618 aa-2.92□□□□□ -2.88
RNU6-539P-201ENST00000516665 ITIH4Q14624 930 aa-2.92□□□□□ -2.88
RNU6-539P-201ENST00000516665 CDK10Q15131 360 aa-2.92□□□□□ -2.88
RNU6-539P-201ENST00000516665 ELOBQ15370 118 aa-2.92□□□□□ -2.88
RNU6-539P-201ENST00000516665 OR7A5Q15622 319 aa-2.92□□□□□ -2.88
RNU6-539P-201ENST00000516665 VPS26BQ4G0F5 336 aa-2.92□□□□□ -2.88
RNU6-539P-201ENST00000516665 GORABQ5T7V8 394 aa-2.92□□□□□ -2.88
RNU6-539P-201ENST00000516665 RGS9BPQ6ZS82 235 aa-2.92□□□□□ -2.88
RNU6-539P-201ENST00000516665 DPY19L4Q7Z388 723 aa-2.92□□□□□ -2.88
RNU6-539P-201ENST00000516665 GLT6D1Q7Z4J2 308 aa-2.92□□□□□ -2.88
RNU6-539P-201ENST00000516665 SLC35F2Q8IXU6 374 aa-2.92□□□□□ -2.88
RNU6-539P-201ENST00000516665 C3orf56Q8N813 242 aa-2.92□□□□□ -2.88
RNU6-539P-201ENST00000516665 ANGPTL6Q8NI99 470 aa-2.92□□□□□ -2.88
RNU6-539P-201ENST00000516665 C16orf78Q8WTQ4 265 aa-2.92□□□□□ -2.88
RNU6-539P-201ENST00000516665 UBE2Q2Q8WVN8 375 aa-2.92□□□□□ -2.88
RNU6-539P-201ENST00000516665 TEKT1Q969V4 418 aa-2.92□□□□□ -2.88
RNU6-539P-201ENST00000516665 HSFY1Q96LI6 401 aa-2.92□□□□□ -2.88
RNU6-539P-201ENST00000516665 FTHL17Q9BXU8 183 aa-2.92□□□□□ -2.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms