RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 RXFP2Q8WXD0 754 aa0.25□□□□□ -2.37
PDGFC-208ENST00000512711 APOBEC3DQ96AK3 386 aaPredicted RBP0.25□□□□□ -2.37
PDGFC-208ENST00000512711 OR8B2Q96RD0 313 aa0.25□□□□□ -2.37
PDGFC-208ENST00000512711 NAPGQ99747 312 aaPredicted RBP0.25□□□□□ -2.37
PDGFC-208ENST00000512711 CXCL16Q9H2A7 254 aa0.25□□□□□ -2.37
PDGFC-208ENST00000512711 FANCEQ9HB96 536 aa0.25□□□□□ -2.37
PDGFC-208ENST00000512711 RDH14Q9HBH5 336 aa0.25□□□□□ -2.37
PDGFC-208ENST00000512711 TMEM165Q9HC07 324 aa0.25□□□□□ -2.37
PDGFC-208ENST00000512711 CLN6Q9NWW5 311 aa0.25□□□□□ -2.37
PDGFC-208ENST00000512711 BLOC1S6Q9UL45 172 aa0.25□□□□□ -2.37
PDGFC-208ENST00000512711 RCL1Q9Y2P8 373 aaKnown RBP0.25□□□□□ -2.37
PDGFC-208ENST00000512711 PPIL1Q9Y3C6 166 aa0.25□□□□□ -2.37
PDGFC-208ENST00000512711 OR51B4Q9Y5P0 310 aa0.25□□□□□ -2.37
PDGFC-208ENST00000512711 ENPP4Q9Y6X5 453 aa0.25□□□□□ -2.37
PDGFC-208ENST00000512711 NCKAP5O14513 1909 aa0.25□□□□□ -2.37
PDGFC-208ENST00000512711 MROH7Q68CQ1 1323 aa0.24□□□□□ -2.37
PDGFC-208ENST00000512711 H7C0C1 242 aa0.24□□□□□ -2.37
PDGFC-208ENST00000512711 ERI3O43414 337 aaKnown RBP0.24□□□□□ -2.37
PDGFC-208ENST00000512711 PSIP1O75475 530 aaKnown RBP0.24□□□□□ -2.37
PDGFC-208ENST00000512711 ZNF189O75820 626 aaPredicted RBP0.24□□□□□ -2.37
PDGFC-208ENST00000512711 CGB7P0DN87 165 aa0.24□□□□□ -2.37
PDGFC-208ENST00000512711 MYL2P10916 166 aa0.24□□□□□ -2.37
PDGFC-208ENST00000512711 CRABP2P29373 138 aa0.24□□□□□ -2.37
PDGFC-208ENST00000512711 PRSS3P35030 304 aa0.24□□□□□ -2.37
PDGFC-208ENST00000512711 RFC3P40938 356 aa0.24□□□□□ -2.37
PDGFC-208ENST00000512711 NBL1P41271 181 aa0.24□□□□□ -2.37
PDGFC-208ENST00000512711 ATP5OP48047 213 aa0.24□□□□□ -2.37
PDGFC-208ENST00000512711 NUDT2P50583 147 aa0.24□□□□□ -2.37
PDGFC-208ENST00000512711 RAB10P61026 200 aa0.24□□□□□ -2.37
PDGFC-208ENST00000512711 UBE2MP61081 183 aaKnown RBP0.24□□□□□ -2.37
PDGFC-208ENST00000512711 ACTR1AP61163 376 aa0.24□□□□□ -2.37
PDGFC-208ENST00000512711 RPS15AP62244 130 aaKnown RBP0.24□□□□□ -2.37
PDGFC-208ENST00000512711 ADIGQ0VDE8 80 aa0.24□□□□□ -2.37
PDGFC-208ENST00000512711 HADHQ16836 314 aaKnown RBP0.24□□□□□ -2.37
PDGFC-208ENST00000512711 STEAP4Q687X5 459 aa0.24□□□□□ -2.37
PDGFC-208ENST00000512711 OR2T5Q6IEZ7 315 aa0.24□□□□□ -2.37
PDGFC-208ENST00000512711 CENPPQ6IPU0 288 aa0.24□□□□□ -2.37
PDGFC-208ENST00000512711 TRMT10CQ7L0Y3 403 aaKnown RBP0.24□□□□□ -2.37
PDGFC-208ENST00000512711 RAB43Q86YS6 212 aa0.24□□□□□ -2.37
PDGFC-208ENST00000512711 AMN1Q8IY45 258 aa0.24□□□□□ -2.37
PDGFC-208ENST00000512711 ZFP82Q8N141 532 aa0.24□□□□□ -2.37
PDGFC-208ENST00000512711 C3orf22Q8N5N4 141 aa0.24□□□□□ -2.37
PDGFC-208ENST00000512711 ZDHHC22Q8N966 263 aa0.24□□□□□ -2.37
PDGFC-208ENST00000512711 TTC29Q8NA56 475 aaPredicted RBP0.24□□□□□ -2.37
PDGFC-208ENST00000512711 OR56B2PQ8NGI1 322 aa0.24□□□□□ -2.37
PDGFC-208ENST00000512711 OR5C1Q8NGR4 320 aa0.24□□□□□ -2.37
PDGFC-208ENST00000512711 OR2T29Q8NH02 315 aa0.24□□□□□ -2.37
PDGFC-208ENST00000512711 OR8S1Q8NH09 359 aa0.24□□□□□ -2.37
PDGFC-208ENST00000512711 OR2V1Q8NHB1 315 aa0.24□□□□□ -2.37
PDGFC-208ENST00000512711 SFXN5Q8TD22 340 aa0.24□□□□□ -2.37
PDGFC-208ENST00000512711 CACNG8Q8WXS5 425 aa0.24□□□□□ -2.37
PDGFC-208ENST00000512711 ELMO1Q92556 727 aa0.24□□□□□ -2.37
PDGFC-208ENST00000512711 PPP1R36Q96LQ0 422 aa0.24□□□□□ -2.37
PDGFC-208ENST00000512711 PRRC1Q96M27 445 aa0.24□□□□□ -2.37
PDGFC-208ENST00000512711 API5Q9BZZ5 524 aaKnown RBP0.24□□□□□ -2.37
PDGFC-208ENST00000512711 ZYG11BQ9C0D3 744 aa0.24□□□□□ -2.37
PDGFC-208ENST00000512711 SLC7A5P2Q9GIP4 190 aa0.24□□□□□ -2.37
PDGFC-208ENST00000512711 PRORYQ9H606 182 aa0.24□□□□□ -2.37
PDGFC-208ENST00000512711 TREX1Q9NSU2 369 aa0.24□□□□□ -2.37
PDGFC-208ENST00000512711 PITPNC1Q9UKF7 332 aa0.24□□□□□ -2.37
PDGFC-208ENST00000512711 NDRG2Q9UN36 371 aaKnown RBP0.24□□□□□ -2.37
PDGFC-208ENST00000512711 CCL26Q9Y258 94 aa0.24□□□□□ -2.37
PDGFC-208ENST00000512711 RGS12O14924 1447 aa0.23□□□□□ -2.37
PDGFC-208ENST00000512711 TMEM131Q92545 1883 aa0.23□□□□□ -2.37
PDGFC-208ENST00000512711 MROH5Q6ZUA9 1318 aa0.23□□□□□ -2.37
PDGFC-208ENST00000512711 FN1P02751 2386 aaKnown RBP0.23□□□□□ -2.37
PDGFC-208ENST00000512711 FSIP2Q5CZC0 6907 aa0.23□□□□□ -2.37
PDGFC-208ENST00000512711 TSPAN11A1L157 253 aa0.23□□□□□ -2.37
PDGFC-208ENST00000512711 A6NED7 52 aa0.23□□□□□ -2.37
PDGFC-208ENST00000512711 LINC01619G3V211 115 aa0.23□□□□□ -2.37
PDGFC-208ENST00000512711 LY6LH3BQJ8 138 aa0.23□□□□□ -2.37
PDGFC-208ENST00000512711 K7ERS5 55 aa0.23□□□□□ -2.37
PDGFC-208ENST00000512711 CXCL11O14625 94 aa0.23□□□□□ -2.37
PDGFC-208ENST00000512711 RNF13O43567 381 aa0.23□□□□□ -2.37
PDGFC-208ENST00000512711 CCNB2O95067 398 aa0.23□□□□□ -2.37
PDGFC-208ENST00000512711 CTLA4P16410 223 aa0.23□□□□□ -2.37
PDGFC-208ENST00000512711 GTF2E2P29084 291 aaKnown RBP0.23□□□□□ -2.37
PDGFC-208ENST00000512711 SLC6A1P30531 599 aa0.23□□□□□ -2.37
PDGFC-208ENST00000512711 MAGEA3P43357 314 aa0.23□□□□□ -2.37
PDGFC-208ENST00000512711 KDSRQ06136 332 aa0.23□□□□□ -2.37
PDGFC-208ENST00000512711 CST6Q15828 149 aa0.23□□□□□ -2.37
PDGFC-208ENST00000512711 SSX2Q16385 188 aa0.23□□□□□ -2.37
PDGFC-208ENST00000512711 TRMT5Q32P41 509 aaKnown RBP0.23□□□□□ -2.37
PDGFC-208ENST00000512711 RGS9BPQ6ZS82 235 aa0.23□□□□□ -2.37
PDGFC-208ENST00000512711 PPP1R42Q7Z4L9 355 aa0.23□□□□□ -2.37
PDGFC-208ENST00000512711 NANOGNBQ7Z5D8 188 aa0.23□□□□□ -2.37
PDGFC-208ENST00000512711 PRNTQ86SH4 94 aa0.23□□□□□ -2.37
PDGFC-208ENST00000512711 SLC30A8Q8IWU4 369 aa0.23□□□□□ -2.37
PDGFC-208ENST00000512711 HS3ST5Q8IZT8 346 aa0.23□□□□□ -2.37
PDGFC-208ENST00000512711 WDR31Q8NA23 367 aa0.23□□□□□ -2.37
PDGFC-208ENST00000512711 OR8K1Q8NGG5 319 aa0.23□□□□□ -2.37
PDGFC-208ENST00000512711 OR56A4Q8NGH8 313 aa0.23□□□□□ -2.37
PDGFC-208ENST00000512711 OR1S1Q8NH92 325 aa0.23□□□□□ -2.37
PDGFC-208ENST00000512711 ZNF563Q8TA94 476 aa0.23□□□□□ -2.37
PDGFC-208ENST00000512711 ASZ1Q8WWH4 475 aa0.23□□□□□ -2.37
PDGFC-208ENST00000512711 RSPH1Q8WYR4 309 aa0.23□□□□□ -2.37
PDGFC-208ENST00000512711 RAB1CQ92928 201 aa0.23□□□□□ -2.37
PDGFC-208ENST00000512711 FBXO32Q969P5 355 aa0.23□□□□□ -2.37
PDGFC-208ENST00000512711 APH1AQ96BI3 265 aa0.23□□□□□ -2.37
PDGFC-208ENST00000512711 MRPL48Q96GC5 212 aaKnown RBP0.23□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms