RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 MYOZ3Q8TDC0 251 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 FAM168AQ92567 244 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 ZDHHC11Q9H8X9 412 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 PEMTQ9UBM1 199 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 PRSS21Q9Y6M0 314 aa8.01□□□□□ -1.13
VCAN-208ENST00000512590 A0A1W2PQL4 384 aaPredicted RBP8□□□□□ -1.13
VCAN-208ENST00000512590 TMEM218A2RU14 115 aa8□□□□□ -1.13
VCAN-208ENST00000512590 HOXC11O43248 304 aaPredicted RBP8□□□□□ -1.13
VCAN-208ENST00000512590 ACTL6AO96019 429 aa8□□□□□ -1.13
VCAN-208ENST00000512590 CLEC2LP0C7M8 214 aa8□□□□□ -1.13
VCAN-208ENST00000512590 CPN1P15169 458 aa8□□□□□ -1.13
VCAN-208ENST00000512590 VDAC2P45880 294 aaPredicted RBP8□□□□□ -1.13
VCAN-208ENST00000512590 ETV1P50549 477 aa8□□□□□ -1.13
VCAN-208ENST00000512590 SLC25A11Q02978 314 aaKnown RBP8□□□□□ -1.13
VCAN-208ENST00000512590 PYCR3Q53H96 274 aa8□□□□□ -1.13
VCAN-208ENST00000512590 LURAP1LQ8IV03 231 aa8□□□□□ -1.13
VCAN-208ENST00000512590 FAM26EQ8N5C1 309 aa8□□□□□ -1.13
VCAN-208ENST00000512590 OR1F12Q8NHA8 337 aa8□□□□□ -1.13
VCAN-208ENST00000512590 ADTRPQ96IZ2 230 aa8□□□□□ -1.13
VCAN-208ENST00000512590 COQ10AQ96MF6 247 aa8□□□□□ -1.13
VCAN-208ENST00000512590 ST3GAL6Q9Y274 331 aa8□□□□□ -1.13
VCAN-208ENST00000512590 LYRM1O43325 122 aa8□□□□□ -1.13
VCAN-208ENST00000512590 DEDDO75618 318 aa8□□□□□ -1.13
VCAN-208ENST00000512590 MRPS11P82912 194 aaKnown RBP8□□□□□ -1.13
VCAN-208ENST00000512590 CIRBPQ14011 172 aaKnown RBP8□□□□□ -1.13
VCAN-208ENST00000512590 CNIH2Q6PI25 160 aa8□□□□□ -1.13
VCAN-208ENST00000512590 HAPLN4Q86UW8 402 aa8□□□□□ -1.13
VCAN-208ENST00000512590 C7orf43Q8WVR3 580 aa8□□□□□ -1.13
VCAN-208ENST00000512590 FGF14Q92915 247 aa8□□□□□ -1.13
VCAN-208ENST00000512590 LRRC61Q9BV99 259 aa8□□□□□ -1.13
VCAN-208ENST00000512590 PLA2G12AQ9BZM1 189 aa8□□□□□ -1.13
VCAN-208ENST00000512590 COQ4Q9Y3A0 265 aa8□□□□□ -1.13
VCAN-208ENST00000512590 TRGV2A0A075B6R0 118 aa8□□□□□ -1.13
VCAN-208ENST00000512590 MELTFP08582 738 aa8□□□□□ -1.13
VCAN-208ENST00000512590 STAG3L2P0CL84 134 aa8□□□□□ -1.13
VCAN-208ENST00000512590 SUMO1P63165 101 aaKnown RBP8□□□□□ -1.13
VCAN-208ENST00000512590 FOXF1Q12946 379 aa8□□□□□ -1.13
VCAN-208ENST00000512590 C3AR1Q16581 482 aa8□□□□□ -1.13
VCAN-208ENST00000512590 SYT14P1Q58G82 188 aa8□□□□□ -1.13
VCAN-208ENST00000512590 TMEM268Q5VZI3 342 aa8□□□□□ -1.13
VCAN-208ENST00000512590 FAM210BQ96KR6 192 aa8□□□□□ -1.13
VCAN-208ENST00000512590 GPR84Q9NQS5 396 aa8□□□□□ -1.13
VCAN-208ENST00000512590 KIAA1324LA8MWY0 1029 aaPredicted RBP8□□□□□ -1.13
VCAN-208ENST00000512590 PTGESO14684 152 aa8□□□□□ -1.13
VCAN-208ENST00000512590 TBX19O60806 448 aa8□□□□□ -1.13
VCAN-208ENST00000512590 ACSM4P0C7M7 580 aa8□□□□□ -1.13
VCAN-208ENST00000512590 SRMP19623 302 aa8□□□□□ -1.13
VCAN-208ENST00000512590 SLC6A12P48065 614 aa8□□□□□ -1.13
VCAN-208ENST00000512590 PCOLCEQ15113 449 aa8□□□□□ -1.13
VCAN-208ENST00000512590 PCSK4Q6UW60 755 aa8□□□□□ -1.13
VCAN-208ENST00000512590 MBOAT2Q6ZWT7 520 aa8□□□□□ -1.13
VCAN-208ENST00000512590 OR10Z1Q8NGY1 313 aa8□□□□□ -1.13
VCAN-208ENST00000512590 LOXL4Q96JB6 756 aa8□□□□□ -1.13
VCAN-208ENST00000512590 ALKBH7Q9BT30 221 aaPredicted RBP8□□□□□ -1.13
VCAN-208ENST00000512590 IL17CQ9P0M4 197 aa8□□□□□ -1.13
VCAN-208ENST00000512590 NTNG1Q9Y2I2 539 aa8□□□□□ -1.13
VCAN-208ENST00000512590 LMO7Q8WWI1 1683 aa8□□□□□ -1.13
VCAN-208ENST00000512590 ZNF724A8MTY0 619 aa7.99□□□□□ -1.13
VCAN-208ENST00000512590 THY1P04216 161 aa7.99□□□□□ -1.13
VCAN-208ENST00000512590 H2AFB1P0C5Y9 115 aa7.99□□□□□ -1.13
VCAN-208ENST00000512590 ZNF547Q8IVP9 402 aa7.99□□□□□ -1.13
VCAN-208ENST00000512590 OR2L13Q8N349 312 aa7.99□□□□□ -1.13
VCAN-208ENST00000512590 DVL3Q92997 716 aaPredicted RBP7.99□□□□□ -1.13
VCAN-208ENST00000512590 RPUSD4Q96CM3 377 aaKnown RBP7.99□□□□□ -1.13
VCAN-208ENST00000512590 ZNF714Q96N38 554 aa7.99□□□□□ -1.13
VCAN-208ENST00000512590 TMEM238LA0A1B0GVL6 79 aa7.99□□□□□ -1.13
VCAN-208ENST00000512590 POM121BA6NF01 834 aa7.99□□□□□ -1.13
VCAN-208ENST00000512590 A6NJY4 79 aa7.99□□□□□ -1.13
VCAN-208ENST00000512590 PPP5D1E7EU14 171 aa7.99□□□□□ -1.13
VCAN-208ENST00000512590 ZNF701M0R085 212 aaPredicted RBP7.99□□□□□ -1.13
VCAN-208ENST00000512590 MDH2P40926 338 aaKnown RBP7.99□□□□□ -1.13
VCAN-208ENST00000512590 PPICP45877 212 aa7.99□□□□□ -1.13
VCAN-208ENST00000512590 SLC37A1P57057 533 aa7.99□□□□□ -1.13
VCAN-208ENST00000512590 BCL7AQ4VC05 210 aa7.99□□□□□ -1.13
VCAN-208ENST00000512590 C1QL3Q5VWW1 255 aa7.99□□□□□ -1.13
VCAN-208ENST00000512590 RELL2Q8NC24 303 aaPredicted RBP7.99□□□□□ -1.13
VCAN-208ENST00000512590 BVESQ8NE79 360 aa7.99□□□□□ -1.13
VCAN-208ENST00000512590 LHX4Q969G2 390 aa7.99□□□□□ -1.13
VCAN-208ENST00000512590 SLC25A10Q9UBX3 287 aaPredicted RBP7.99□□□□□ -1.13
VCAN-208ENST00000512590 SLC45A2Q9UMX9 530 aa7.99□□□□□ -1.13
VCAN-208ENST00000512590 RNF115Q9Y4L5 304 aa7.99□□□□□ -1.13
VCAN-208ENST00000512590 UBE2L5PA0A1B0GUS4 154 aa7.99□□□□□ -1.13
VCAN-208ENST00000512590 hCG_38984A0A1B0GV85 526 aa7.99□□□□□ -1.13
VCAN-208ENST00000512590 MFSD2BA6NFX1 497 aa7.99□□□□□ -1.13
VCAN-208ENST00000512590 SPRY1O43609 319 aaPredicted RBP7.99□□□□□ -1.13
VCAN-208ENST00000512590 MITFO75030 526 aaPredicted RBP7.99□□□□□ -1.13
VCAN-208ENST00000512590 ARRB2P32121 409 aa7.99□□□□□ -1.13
VCAN-208ENST00000512590 ACAA2P42765 397 aaKnown RBP7.99□□□□□ -1.13
VCAN-208ENST00000512590 RPS4XP62701 263 aaKnown RBP7.99□□□□□ -1.13
VCAN-208ENST00000512590 CLDN10P78369 228 aa7.99□□□□□ -1.13
VCAN-208ENST00000512590 ZNF77Q15935 545 aa7.99□□□□□ -1.13
VCAN-208ENST00000512590 LEXMQ3ZCV2 418 aa7.99□□□□□ -1.13
VCAN-208ENST00000512590 TMEM78Q5T7P6 136 aa7.99□□□□□ -1.13
VCAN-208ENST00000512590 TMEM81Q6P7N7 255 aa7.99□□□□□ -1.13
VCAN-208ENST00000512590 OR5AP2Q8NGF4 316 aa7.99□□□□□ -1.13
VCAN-208ENST00000512590 PHLDA1Q8WV24 401 aaPredicted RBP7.99□□□□□ -1.13
VCAN-208ENST00000512590 POLR1AO95602 1720 aaPredicted RBP7.99□□□□□ -1.13
VCAN-208ENST00000512590 BCL9LQ86UU0 1499 aa7.99□□□□□ -1.13
VCAN-208ENST00000512590 A0A1B0GTQ1 180 aa7.99□□□□□ -1.13
VCAN-208ENST00000512590 C7orf72A4D263 438 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms