RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 CD276Q5ZPR3 534 aa13.64□□□□□ -0.23
DDX41-213ENST00000512027 TMEM42Q69YG0 159 aa13.64□□□□□ -0.23
DDX41-213ENST00000512027 DOK3Q7L591 496 aa13.64□□□□□ -0.23
DDX41-213ENST00000512027 RDH10Q8IZV5 341 aa13.64□□□□□ -0.23
DDX41-213ENST00000512027 OR5A2Q8NGI9 324 aa13.64□□□□□ -0.23
DDX41-213ENST00000512027 NPRL2Q8WTW4 380 aa13.64□□□□□ -0.23
DDX41-213ENST00000512027 AQP3Q92482 292 aa13.64□□□□□ -0.23
DDX41-213ENST00000512027 C1orf147Q96MC9 270 aaPredicted RBP13.64□□□□□ -0.23
DDX41-213ENST00000512027 GAFA1Q96PS6 74 aa13.64□□□□□ -0.23
DDX41-213ENST00000512027 TBX15Q96SF7 602 aa13.64□□□□□ -0.23
DDX41-213ENST00000512027 A0A1B0GVI7 797 aa13.63□□□□□ -0.23
DDX41-213ENST00000512027 OR5B21A6NL26 309 aa13.63□□□□□ -0.23
DDX41-213ENST00000512027 ZNF879B4DU55 563 aa13.63□□□□□ -0.23
DDX41-213ENST00000512027 J3QRE1 110 aa13.63□□□□□ -0.23
DDX41-213ENST00000512027 SULT1C4O75897 302 aa13.63□□□□□ -0.23
DDX41-213ENST00000512027 PPIAL4GP0DN37 164 aa13.63□□□□□ -0.23
DDX41-213ENST00000512027 MMP9P14780 707 aa13.63□□□□□ -0.23
DDX41-213ENST00000512027 CCL1P22362 96 aa13.63□□□□□ -0.23
DDX41-213ENST00000512027 OR12D2P58182 307 aa13.63□□□□□ -0.23
DDX41-213ENST00000512027 ARF6P62330 175 aa13.63□□□□□ -0.23
DDX41-213ENST00000512027 PRB3Q04118 309 aaPredicted RBP13.63□□□□□ -0.23
DDX41-213ENST00000512027 ZNF91Q05481 1191 aa13.63□□□□□ -0.23
DDX41-213ENST00000512027 TUSC1Q2TAM9 212 aa13.63□□□□□ -0.23
DDX41-213ENST00000512027 SLC25A30Q5SVS4 291 aa13.63□□□□□ -0.23
DDX41-213ENST00000512027 FAM220AQ7Z4H9 259 aa13.63□□□□□ -0.23
DDX41-213ENST00000512027 C10orf67Q8IYJ2 551 aa13.63□□□□□ -0.23
DDX41-213ENST00000512027 ANGPTL6Q8NI99 470 aa13.63□□□□□ -0.23
DDX41-213ENST00000512027 TRMT10AQ8TBZ6 339 aaKnown RBP13.63□□□□□ -0.23
DDX41-213ENST00000512027 LGALS12Q96DT0 336 aa13.63□□□□□ -0.23
DDX41-213ENST00000512027 SIRPDQ9H106 197 aa13.63□□□□□ -0.23
DDX41-213ENST00000512027 ELL3Q9HB65 397 aaPredicted RBP13.63□□□□□ -0.23
DDX41-213ENST00000512027 AMBNQ9NP70 447 aa13.63□□□□□ -0.23
DDX41-213ENST00000512027 NLKQ9UBE8 527 aa13.63□□□□□ -0.23
DDX41-213ENST00000512027 RPUSD1Q9UJJ7 312 aaKnown RBP13.63□□□□□ -0.23
DDX41-213ENST00000512027 IGKV1D-17A0A075B6S4 117 aa13.62□□□□□ -0.23
DDX41-213ENST00000512027 LOC107986453A0A1B0GWG9 222 aa13.62□□□□□ -0.23
DDX41-213ENST00000512027 DAPL1A0PJW8 107 aa13.62□□□□□ -0.23
DDX41-213ENST00000512027 DNAJC9-AS1A6NH13 148 aa13.62□□□□□ -0.23
DDX41-213ENST00000512027 OR2AT4A6NND4 320 aa13.62□□□□□ -0.23
DDX41-213ENST00000512027 ANKRD65E5RJM6 399 aa13.62□□□□□ -0.23
DDX41-213ENST00000512027 TRIM77I1YAP6 450 aa13.62□□□□□ -0.23
DDX41-213ENST00000512027 SYT7O43581 403 aa13.62□□□□□ -0.23
DDX41-213ENST00000512027 NDUFB3O43676 98 aa13.62□□□□□ -0.23
DDX41-213ENST00000512027 TOX4O94842 621 aa13.62□□□□□ -0.23
DDX41-213ENST00000512027 HAAOP46952 286 aa13.62□□□□□ -0.23
DDX41-213ENST00000512027 GABRA2P47869 451 aa13.62□□□□□ -0.23
DDX41-213ENST00000512027 TGM4P49221 684 aa13.62□□□□□ -0.23
DDX41-213ENST00000512027 DLX1P56177 255 aa13.62□□□□□ -0.23
DDX41-213ENST00000512027 NANOS3P60323 173 aaKnown RBP13.62□□□□□ -0.23
DDX41-213ENST00000512027 UBA52P62987 128 aaKnown RBP13.62□□□□□ -0.23
DDX41-213ENST00000512027 ACTG1P63261 375 aa13.62□□□□□ -0.23
DDX41-213ENST00000512027 DGUOKQ16854 277 aa13.62□□□□□ -0.23
DDX41-213ENST00000512027 MEDAGQ5VYS4 303 aa13.62□□□□□ -0.23
DDX41-213ENST00000512027 ZNF788Q6ZQV5 615 aa13.62□□□□□ -0.23
DDX41-213ENST00000512027 Q6ZSR3 168 aa13.62□□□□□ -0.23
DDX41-213ENST00000512027 SLC36A1Q7Z2H8 476 aa13.62□□□□□ -0.23
DDX41-213ENST00000512027 PDZD9Q8IXQ8 264 aa13.62□□□□□ -0.23
DDX41-213ENST00000512027 PNLDC1Q8NA58 520 aaKnown RBP13.62□□□□□ -0.23
DDX41-213ENST00000512027 H1FXQ92522 213 aaKnown RBP13.62□□□□□ -0.23
DDX41-213ENST00000512027 C12orf43Q96C57 262 aaKnown RBP13.62□□□□□ -0.23
DDX41-213ENST00000512027 WDFY2Q96P53 400 aa13.62□□□□□ -0.23
DDX41-213ENST00000512027 JMJD8Q96S16 334 aa13.62□□□□□ -0.23
DDX41-213ENST00000512027 PLEKHA1Q9HB21 404 aa13.62□□□□□ -0.23
DDX41-213ENST00000512027 FAM118AQ9NWS6 357 aa13.62□□□□□ -0.23
DDX41-213ENST00000512027 LOC100130705A0A1B0GUX0 176 aa13.61□□□□□ -0.23
DDX41-213ENST00000512027 PQLC2LA1A4F0 135 aa13.61□□□□□ -0.23
DDX41-213ENST00000512027 ANKRD61A6NGH8 418 aa13.61□□□□□ -0.23
DDX41-213ENST00000512027 NKX6-3A6NJ46 265 aa13.61□□□□□ -0.23
DDX41-213ENST00000512027 DLGAP1O14490 977 aa13.61□□□□□ -0.23
DDX41-213ENST00000512027 DBTP11182 482 aaKnown RBP13.61□□□□□ -0.23
DDX41-213ENST00000512027 PSG2P11465 335 aa13.61□□□□□ -0.23
DDX41-213ENST00000512027 CEBPDP49716 269 aaPredicted RBP13.61□□□□□ -0.23
DDX41-213ENST00000512027 LRRC36Q1X8D7 754 aa13.61□□□□□ -0.23
DDX41-213ENST00000512027 CDONQ4KMG0 1287 aa13.61□□□□□ -0.23
DDX41-213ENST00000512027 ATPAF1Q5TC12 328 aaPredicted RBP13.61□□□□□ -0.23
DDX41-213ENST00000512027 METTL11BQ5VVY1 283 aa13.61□□□□□ -0.23
DDX41-213ENST00000512027 RBMS3Q6XE24 437 aaKnown RBP13.61□□□□□ -0.23
DDX41-213ENST00000512027 ANGPTL5Q86XS5 388 aa13.61□□□□□ -0.23
DDX41-213ENST00000512027 CALHM1Q8IU99 346 aa13.61□□□□□ -0.23
DDX41-213ENST00000512027 RHOXF1Q8NHV9 184 aa13.61□□□□□ -0.23
DDX41-213ENST00000512027 FAM216AQ8WUB2 273 aa13.61□□□□□ -0.23
DDX41-213ENST00000512027 ZFAND2BQ8WV99 257 aa13.61□□□□□ -0.23
DDX41-213ENST00000512027 APH1BQ8WW43 257 aa13.61□□□□□ -0.23
DDX41-213ENST00000512027 TAF15Q92804 592 aaKnown RBP eCLIP13.61□□□□□ -0.23
DDX41-213ENST00000512027 STMN2Q93045 179 aa13.61□□□□□ -0.23
DDX41-213ENST00000512027 TMIGD2Q96BF3 282 aa13.61□□□□□ -0.23
DDX41-213ENST00000512027 ONECUT1Q9UBC0 465 aa13.61□□□□□ -0.23
DDX41-213ENST00000512027 ZNF222Q9UK12 451 aa13.61□□□□□ -0.23
DDX41-213ENST00000512027 EXOGQ9Y2C4 368 aaKnown RBP13.61□□□□□ -0.23
DDX41-213ENST00000512027 MYRFQ9Y2G1 1151 aa13.61□□□□□ -0.23
DDX41-213ENST00000512027 CENPVL3A0A0U1RRI6 287 aa13.6□□□□□ -0.23
DDX41-213ENST00000512027 FAM230AA0A1W2PPH8 454 aa13.6□□□□□ -0.23
DDX41-213ENST00000512027 J3QLW9 94 aa13.6□□□□□ -0.23
DDX41-213ENST00000512027 J3QT63 122 aa13.6□□□□□ -0.23
DDX41-213ENST00000512027 SLC16A6O15403 523 aa13.6□□□□□ -0.23
DDX41-213ENST00000512027 INMTO95050 263 aa13.6□□□□□ -0.23
DDX41-213ENST00000512027 ZNF19P17023 458 aa13.6□□□□□ -0.23
DDX41-213ENST00000512027 ACTC1P68032 377 aa13.6□□□□□ -0.23
DDX41-213ENST00000512027 ACTA1P68133 377 aa13.6□□□□□ -0.23
DDX41-213ENST00000512027 IL13RA1P78552 427 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms