RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 MNTQ99583 582 aa6□□□□□ -1.45
TOPBP1-207ENST00000509162 ALG8Q9BVK2 526 aa6□□□□□ -1.45
TOPBP1-207ENST00000509162 PAPOLGQ9BWT3 736 aaKnown RBP6□□□□□ -1.45
TOPBP1-207ENST00000509162 RGCCQ9H4X1 137 aa6□□□□□ -1.45
TOPBP1-207ENST00000509162 MOB1AQ9H8S9 216 aa6□□□□□ -1.45
TOPBP1-207ENST00000509162 PATZ1Q9HBE1 687 aaKnown RBP6□□□□□ -1.45
TOPBP1-207ENST00000509162 FGF20Q9NP95 211 aaPredicted RBP6□□□□□ -1.45
TOPBP1-207ENST00000509162 MMP26Q9NRE1 261 aa6□□□□□ -1.45
TOPBP1-207ENST00000509162 GPR173Q9NS66 373 aa6□□□□□ -1.45
TOPBP1-207ENST00000509162 FKBP14Q9NWM8 211 aa6□□□□□ -1.45
TOPBP1-207ENST00000509162 ERVK13-1Q9NX77 482 aa6□□□□□ -1.45
TOPBP1-207ENST00000509162 GNG8Q9UK08 70 aa6□□□□□ -1.45
TOPBP1-207ENST00000509162 ZNF222Q9UK12 451 aa6□□□□□ -1.45
TOPBP1-207ENST00000509162 PPP1R3CQ9UQK1 317 aa6□□□□□ -1.45
TOPBP1-207ENST00000509162 SOX21Q9Y651 276 aaPredicted RBP6□□□□□ -1.45
TOPBP1-207ENST00000509162 TMEM14AQ9Y6G1 99 aa6□□□□□ -1.45
TOPBP1-207ENST00000509162 ISPDA4D126 451 aa5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 ACOD1A6NK06 481 aa5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 A8MV72 311 aaPredicted RBP5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 SRRM5B3KS81 715 aa5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 F8VVB4 439 aa5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 F8VWA3 439 aa5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 PHYHO14832 338 aa5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 PHF1O43189 567 aaPredicted RBP5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 PAX4O43316 350 aa5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 SYNGR1O43759 233 aa5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 SULT1C4O75897 302 aa5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 DHRS3O75911 302 aa5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 ATP6V1G2O95670 118 aa5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 GRPP07492 148 aa5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 PF4V1P10720 104 aa5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 SRP9P49458 86 aaKnown RBP5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 DVL1P1P54792 670 aaPredicted RBP5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 RIPPLY3P57055 190 aa5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 LCN2P80188 198 aa5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 SLC34A1Q06495 639 aa5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 GALEQ14376 348 aa5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 UBE2V2Q15819 145 aa5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 MOGQ16653 247 aa5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 FAM76BQ5HYJ3 339 aa5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 KLF17Q5JT82 389 aaPredicted RBP5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 FAM120AOSQ5T036 256 aa5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 MEDAGQ5VYS4 303 aa5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 TEX36Q5VZQ5 186 aa5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 STUMQ69YW2 141 aa5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 CYB5R2Q6BCY4 276 aa5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 SFRP4Q6FHJ7 346 aaPredicted RBP5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 KCTD18Q6PI47 426 aaPredicted RBP5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 LHFPL3Q86UP9 236 aa5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 CALHM1Q8IU99 346 aa5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 ZDHHC23Q8IYP9 409 aa5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 BATF2Q8N1L9 274 aa5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 FAM216BQ8N7L0 139 aa5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 YIPF7Q8N8F6 280 aa5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 LINC01356Q8N9X3 169 aa5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 OR13C5Q8NGS8 318 aa5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 LRRC29Q8WV35 223 aa5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 GGHQ92820 318 aa5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 NKX3-1Q99801 234 aaPredicted RBP5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 GAL3ST1Q99999 423 aa5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 TEX12Q9BXU0 123 aa5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 MROQ9BYG7 248 aa5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 EGLN1Q9GZT9 426 aa5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 OR51I2Q9H344 312 aa5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 TMEM160Q9NX00 188 aa5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 UBAP1Q9NZ09 502 aa5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 IL36RNQ9UBH0 155 aa5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 GTF2A1LQ9UNN4 478 aa5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 ORC6Q9Y5N6 252 aa5.99□□□□□ -1.45
TOPBP1-207ENST00000509162 ZNF816-ZNF321PA0A0X1KG74 233 aa5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 PQLC2LA1A4F0 135 aa5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 MAGEA13PA6NCF6 341 aa5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 ANKRD30BLA7E2S9 258 aa5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 LGALS8O00214 317 aa5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 CDIPTO14735 213 aa5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 GMDSO60547 372 aa5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 ZFPL1O95159 310 aa5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 TGFAP01135 160 aa5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 APOC1P02654 83 aa5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 KRT8P05787 483 aa5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 HTR1AP08908 422 aa5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 WNT2P09544 360 aa5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 ZNF12P17014 697 aa5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 ADRA2CP18825 462 aa5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 TNFRSF1AP19438 455 aa5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 TNFSF4P23510 183 aa5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 DDOSTP39656 456 aa5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 MDH2P40926 338 aaKnown RBP5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 CEBPDP49716 269 aaPredicted RBP5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 GPM6AP51674 278 aa5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 DLX1P56177 255 aa5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 RPS11P62280 158 aaKnown RBP eCLIP5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 RPL11P62913 178 aaKnown RBP5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 ACTC1P68032 377 aa5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 ACTA1P68133 377 aa5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 RAB40BQ12829 278 aa5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 FAM166AQ6J272 317 aa5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 KLBQ86Z14 1044 aa5.98□□□□□ -1.45
TOPBP1-207ENST00000509162 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms