RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 VGLL3A8MV65 326 aa12.9□□□□□ -0.34
CXCL1-202ENST00000509101 CST4P01036 141 aa12.9□□□□□ -0.34
CXCL1-202ENST00000509101 FABP3P05413 133 aa12.9□□□□□ -0.34
CXCL1-202ENST00000509101 H2BFMP0C1H6 154 aa12.9□□□□□ -0.34
CXCL1-202ENST00000509101 PF4V1P10720 104 aa12.9□□□□□ -0.34
CXCL1-202ENST00000509101 FAHP16930 419 aa12.9□□□□□ -0.34
CXCL1-202ENST00000509101 MSX2P35548 267 aaPredicted RBP12.9□□□□□ -0.34
CXCL1-202ENST00000509101 OPRL1P41146 370 aa12.9□□□□□ -0.34
CXCL1-202ENST00000509101 VDAC2P45880 294 aaPredicted RBP12.9□□□□□ -0.34
CXCL1-202ENST00000509101 SLC25A1P53007 311 aa12.9□□□□□ -0.34
CXCL1-202ENST00000509101 RPL31P62899 125 aaKnown RBP12.9□□□□□ -0.34
CXCL1-202ENST00000509101 DEFB121Q5J5C9 76 aa12.9□□□□□ -0.34
CXCL1-202ENST00000509101 LINC01590Q5TEZ4 76 aa12.9□□□□□ -0.34
CXCL1-202ENST00000509101 Q6ZS46 218 aa12.9□□□□□ -0.34
CXCL1-202ENST00000509101 LINC00471Q8N535 108 aa12.9□□□□□ -0.34
CXCL1-202ENST00000509101 C11orf42Q8N5U0 333 aa12.9□□□□□ -0.34
CXCL1-202ENST00000509101 OR4Q3Q8NH05 313 aa12.9□□□□□ -0.34
CXCL1-202ENST00000509101 SDSLQ96GA7 329 aa12.9□□□□□ -0.34
CXCL1-202ENST00000509101 LYZL4Q96KX0 146 aa12.9□□□□□ -0.34
CXCL1-202ENST00000509101 INTS14Q96SY0 518 aa12.9□□□□□ -0.34
CXCL1-202ENST00000509101 TSSK6Q9BXA6 273 aa12.9□□□□□ -0.34
CXCL1-202ENST00000509101 SPAG4Q9NPE6 437 aa12.9□□□□□ -0.34
CXCL1-202ENST00000509101 IL20Q9NYY1 176 aa12.9□□□□□ -0.34
CXCL1-202ENST00000509101 USE1Q9NZ43 259 aa12.9□□□□□ -0.34
CXCL1-202ENST00000509101 A0A1W2PPH5 198 aa12.89□□□□□ -0.35
CXCL1-202ENST00000509101 WI2-2373I1.2A0A1W2PRP0 233 aa12.89□□□□□ -0.35
CXCL1-202ENST00000509101 ZNF273Q14593 569 aa12.89□□□□□ -0.35
CXCL1-202ENST00000509101 CEP78Q5JTW2 689 aa12.89□□□□□ -0.35
CXCL1-202ENST00000509101 TMEM200BQ69YZ2 307 aa12.89□□□□□ -0.35
CXCL1-202ENST00000509101 THAP5Q7Z6K1 395 aa12.89□□□□□ -0.35
CXCL1-202ENST00000509101 WFDC9Q8NEX5 89 aa12.89□□□□□ -0.35
CXCL1-202ENST00000509101 OR4M1Q8NGD0 313 aa12.89□□□□□ -0.35
CXCL1-202ENST00000509101 RPS4Y2Q8TD47 263 aa12.89□□□□□ -0.35
CXCL1-202ENST00000509101 HIST1H2AAQ96QV6 131 aa12.89□□□□□ -0.35
CXCL1-202ENST00000509101 GORASP2Q9H8Y8 452 aa12.89□□□□□ -0.35
CXCL1-202ENST00000509101 MED20Q9H944 212 aa12.89□□□□□ -0.35
CXCL1-202ENST00000509101 ARMC1Q9NVT9 282 aa12.89□□□□□ -0.35
CXCL1-202ENST00000509101 PITPNC1Q9UKF7 332 aa12.89□□□□□ -0.35
CXCL1-202ENST00000509101 LRP12Q9Y561 859 aa12.89□□□□□ -0.35
CXCL1-202ENST00000509101 FAM90A8PA6NJQ4 464 aa12.88□□□□□ -0.35
CXCL1-202ENST00000509101 ZNF732B4DXR9 585 aa12.88□□□□□ -0.35
CXCL1-202ENST00000509101 SOX14O95416 240 aa12.88□□□□□ -0.35
CXCL1-202ENST00000509101 PF4P02776 101 aa12.88□□□□□ -0.35
CXCL1-202ENST00000509101 CEBPDP49716 269 aaPredicted RBP12.88□□□□□ -0.35
CXCL1-202ENST00000509101 BLVRAP53004 296 aa12.88□□□□□ -0.35
CXCL1-202ENST00000509101 KRTAP10-11P60412 298 aa12.88□□□□□ -0.35
CXCL1-202ENST00000509101 SLC35A2P78381 396 aa12.88□□□□□ -0.35
CXCL1-202ENST00000509101 DMRTC1Q5HYR2 192 aa12.88□□□□□ -0.35
CXCL1-202ENST00000509101 RASSF6Q6ZTQ3 369 aa12.88□□□□□ -0.35
CXCL1-202ENST00000509101 CD177Q8N6Q3 437 aa12.88□□□□□ -0.35
CXCL1-202ENST00000509101 OR8B12Q8NGG6 310 aa12.88□□□□□ -0.35
CXCL1-202ENST00000509101 FAM81AQ8TBF8 368 aa12.88□□□□□ -0.35
CXCL1-202ENST00000509101 FOXRED1Q96CU9 486 aaPredicted RBP12.88□□□□□ -0.35
CXCL1-202ENST00000509101 WWC2-AS2Q96NR7 200 aa12.88□□□□□ -0.35
CXCL1-202ENST00000509101 OR51I2Q9H344 312 aa12.88□□□□□ -0.35
CXCL1-202ENST00000509101 LYVE1Q9Y5Y7 322 aa12.88□□□□□ -0.35
CXCL1-202ENST00000509101 hCG_1809904A0A1W2PP81 198 aa12.87□□□□□ -0.35
CXCL1-202ENST00000509101 A0A1W2PPE2 198 aa12.87□□□□□ -0.35
CXCL1-202ENST00000509101 A0A1W2PR64 198 aa12.87□□□□□ -0.35
CXCL1-202ENST00000509101 A0A1W2PRV1 198 aa12.87□□□□□ -0.35
CXCL1-202ENST00000509101 FAM183AA6NL82 134 aa12.87□□□□□ -0.35
CXCL1-202ENST00000509101 RFPL4AA6NLU0 287 aa12.87□□□□□ -0.35
CXCL1-202ENST00000509101 RFPL4AL1F8VTS6 287 aa12.87□□□□□ -0.35
CXCL1-202ENST00000509101 MTRF1O75570 445 aaKnown RBP12.87□□□□□ -0.35
CXCL1-202ENST00000509101 IFNGP01579 166 aa12.87□□□□□ -0.35
CXCL1-202ENST00000509101 ARG1P05089 322 aa12.87□□□□□ -0.35
CXCL1-202ENST00000509101 PIPP12273 146 aaPredicted RBP12.87□□□□□ -0.35
CXCL1-202ENST00000509101 ZNF3P17036 446 aa12.87□□□□□ -0.35
CXCL1-202ENST00000509101 GSTT1P30711 240 aa12.87□□□□□ -0.35
CXCL1-202ENST00000509101 BLCAPP62952 87 aa12.87□□□□□ -0.35
CXCL1-202ENST00000509101 GNG3P63215 75 aa12.87□□□□□ -0.35
CXCL1-202ENST00000509101 CD69Q07108 199 aa12.87□□□□□ -0.35
CXCL1-202ENST00000509101 SSX2Q16385 188 aa12.87□□□□□ -0.35
CXCL1-202ENST00000509101 ACP7Q6ZNF0 438 aa12.87□□□□□ -0.35
CXCL1-202ENST00000509101 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.87□□□□□ -0.35
CXCL1-202ENST00000509101 OR5AU1Q8NGC0 362 aa12.87□□□□□ -0.35
CXCL1-202ENST00000509101 OR2T27Q8NH04 317 aa12.87□□□□□ -0.35
CXCL1-202ENST00000509101 AQP3Q92482 292 aa12.87□□□□□ -0.35
CXCL1-202ENST00000509101 OTULINQ96BN8 352 aa12.87□□□□□ -0.35
CXCL1-202ENST00000509101 ZNF488Q96MN9 340 aa12.87□□□□□ -0.35
CXCL1-202ENST00000509101 MUC13Q9H3R2 512 aa12.87□□□□□ -0.35
CXCL1-202ENST00000509101 IL1RAPQ9NPH3 570 aa12.87□□□□□ -0.35
CXCL1-202ENST00000509101 MAGEL2Q9UJ55 1249 aa12.87□□□□□ -0.35
CXCL1-202ENST00000509101 TBL2Q9Y4P3 447 aaKnown RBP12.87□□□□□ -0.35
CXCL1-202ENST00000509101 RIIAD1A6NNX1 92 aa12.86□□□□□ -0.35
CXCL1-202ENST00000509101 ODF3BA8MYP8 253 aa12.86□□□□□ -0.35
CXCL1-202ENST00000509101 SLC1A7O00341 560 aa12.86□□□□□ -0.35
CXCL1-202ENST00000509101 DCTN3O75935 186 aa12.86□□□□□ -0.35
CXCL1-202ENST00000509101 FAM107AO95990 144 aa12.86□□□□□ -0.35
CXCL1-202ENST00000509101 GASTP01350 101 aa12.86□□□□□ -0.35
CXCL1-202ENST00000509101 ALDOBP05062 364 aa12.86□□□□□ -0.35
CXCL1-202ENST00000509101 PSMA6P60900 246 aaKnown RBP12.86□□□□□ -0.35
CXCL1-202ENST00000509101 CD83Q01151 205 aa12.86□□□□□ -0.35
CXCL1-202ENST00000509101 SMIM21Q3B7S5 101 aa12.86□□□□□ -0.35
CXCL1-202ENST00000509101 SAMD4BQ5PRF9 694 aaKnown RBP12.86□□□□□ -0.35
CXCL1-202ENST00000509101 LDLRAD2Q5SZI1 272 aa12.86□□□□□ -0.35
CXCL1-202ENST00000509101 HAGHLQ6PII5 290 aaPredicted RBP12.86□□□□□ -0.35
CXCL1-202ENST00000509101 CCDC121Q6ZUS5 278 aa12.86□□□□□ -0.35
CXCL1-202ENST00000509101 SHFQ7M4L6 423 aa12.86□□□□□ -0.35
CXCL1-202ENST00000509101 OR2T33Q8NG76 320 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms