RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 PROK1P58294 105 aa10.65□□□□□ -0.7
HMGCS1-205ENST00000508319 OCLNQ16625 522 aa10.65□□□□□ -0.7
HMGCS1-205ENST00000508319 LCN1P1Q5VSP4 162 aa10.65□□□□□ -0.7
HMGCS1-205ENST00000508319 GDPGP1Q6ZNW5 385 aa10.65□□□□□ -0.7
HMGCS1-205ENST00000508319 C1orf122Q6ZSJ8 110 aa10.65□□□□□ -0.7
HMGCS1-205ENST00000508319 Q6ZSV7 163 aa10.65□□□□□ -0.7
HMGCS1-205ENST00000508319 COMMD2Q86X83 199 aa10.65□□□□□ -0.7
HMGCS1-205ENST00000508319 ZNF679Q8IYX0 411 aa10.65□□□□□ -0.7
HMGCS1-205ENST00000508319 PNKDQ8N490 385 aa10.65□□□□□ -0.7
HMGCS1-205ENST00000508319 OR51E1Q8TCB6 317 aa10.65□□□□□ -0.7
HMGCS1-205ENST00000508319 LRTOMTQ8WZ04 291 aa10.65□□□□□ -0.7
HMGCS1-205ENST00000508319 AQP3Q92482 292 aa10.65□□□□□ -0.7
HMGCS1-205ENST00000508319 ITFG2Q969R8 447 aa10.65□□□□□ -0.7
HMGCS1-205ENST00000508319 NRBF2Q96F24 287 aa10.65□□□□□ -0.7
HMGCS1-205ENST00000508319 MED30Q96HR3 178 aa10.65□□□□□ -0.7
HMGCS1-205ENST00000508319 HIST1H2AAQ96QV6 131 aa10.65□□□□□ -0.7
HMGCS1-205ENST00000508319 CNN2Q99439 309 aaKnown RBP10.65□□□□□ -0.7
HMGCS1-205ENST00000508319 MROQ9BYG7 248 aa10.65□□□□□ -0.7
HMGCS1-205ENST00000508319 PBOV1Q9GZY1 135 aa10.65□□□□□ -0.7
HMGCS1-205ENST00000508319 ELL3Q9HB65 397 aaPredicted RBP10.65□□□□□ -0.7
HMGCS1-205ENST00000508319 VPREB3Q9UKI3 123 aa10.65□□□□□ -0.7
HMGCS1-205ENST00000508319 CAB39Q9Y376 341 aaPredicted RBP10.65□□□□□ -0.7
HMGCS1-205ENST00000508319 FAM96BQ9Y3D0 163 aa10.65□□□□□ -0.7
HMGCS1-205ENST00000508319 RNF114Q9Y508 228 aa10.65□□□□□ -0.7
HMGCS1-205ENST00000508319 MAB21L2Q9Y586 359 aa10.65□□□□□ -0.7
HMGCS1-205ENST00000508319 A0A1W2PRD5 423 aa10.64□□□□□ -0.71
HMGCS1-205ENST00000508319 A0A1W2PRF3 423 aa10.64□□□□□ -0.71
HMGCS1-205ENST00000508319 A0A1W2PRM7 423 aa10.64□□□□□ -0.71
HMGCS1-205ENST00000508319 M0R129 80 aa10.64□□□□□ -0.71
HMGCS1-205ENST00000508319 ZNF254O75437 659 aa10.64□□□□□ -0.71
HMGCS1-205ENST00000508319 SRSF10O75494 262 aaKnown RBP10.64□□□□□ -0.71
HMGCS1-205ENST00000508319 CLPXO76031 633 aa10.64□□□□□ -0.71
HMGCS1-205ENST00000508319 TTRP02766 147 aa10.64□□□□□ -0.71
HMGCS1-205ENST00000508319 NDUFB7P17568 137 aa10.64□□□□□ -0.71
HMGCS1-205ENST00000508319 EEF1B2P24534 225 aaKnown RBP10.64□□□□□ -0.71
HMGCS1-205ENST00000508319 GABRA2P47869 451 aa10.64□□□□□ -0.71
HMGCS1-205ENST00000508319 RIDAP52758 137 aaKnown RBP10.64□□□□□ -0.71
HMGCS1-205ENST00000508319 RIPPLY1Q0D2K3 151 aa10.64□□□□□ -0.71
HMGCS1-205ENST00000508319 PTGES3Q15185 160 aaKnown RBP10.64□□□□□ -0.71
HMGCS1-205ENST00000508319 ZNF829Q3KNS6 432 aaPredicted RBP10.64□□□□□ -0.71
HMGCS1-205ENST00000508319 ZBTB37Q5TC79 503 aa10.64□□□□□ -0.71
HMGCS1-205ENST00000508319 PLCXD3Q63HM9 321 aa10.64□□□□□ -0.71
HMGCS1-205ENST00000508319 HAGHLQ6PII5 290 aaPredicted RBP10.64□□□□□ -0.71
HMGCS1-205ENST00000508319 BCDIN3DQ7Z5W3 292 aaKnown RBP10.64□□□□□ -0.71
HMGCS1-205ENST00000508319 ZSCAN4Q8NAM6 433 aaPredicted RBP10.64□□□□□ -0.71
HMGCS1-205ENST00000508319 ZNRF1Q8ND25 227 aa10.64□□□□□ -0.71
HMGCS1-205ENST00000508319 ASB17Q8WXJ9 295 aa10.64□□□□□ -0.71
HMGCS1-205ENST00000508319 UTP4Q969X6 686 aaKnown RBP10.64□□□□□ -0.71
HMGCS1-205ENST00000508319 SDSLQ96GA7 329 aa10.64□□□□□ -0.71
HMGCS1-205ENST00000508319 METTL8Q9H825 291 aaKnown RBP10.64□□□□□ -0.71
HMGCS1-205ENST00000508319 PIGLQ9Y2B2 252 aa10.64□□□□□ -0.71
HMGCS1-205ENST00000508319 TMEM14AQ9Y6G1 99 aa10.64□□□□□ -0.71
HMGCS1-205ENST00000508319 TRBV23-1A0A0A0MS06 115 aa10.63□□□□□ -0.71
HMGCS1-205ENST00000508319 A0A1W2PQ09 198 aa10.63□□□□□ -0.71
HMGCS1-205ENST00000508319 DHRS3O75911 302 aa10.63□□□□□ -0.71
HMGCS1-205ENST00000508319 DNAJC8O75937 253 aaPredicted RBP10.63□□□□□ -0.71
HMGCS1-205ENST00000508319 EPHA2P29317 976 aa10.63□□□□□ -0.71
HMGCS1-205ENST00000508319 UBE2E1P51965 193 aa10.63□□□□□ -0.71
HMGCS1-205ENST00000508319 DEFA6Q01524 100 aa10.63□□□□□ -0.71
HMGCS1-205ENST00000508319 NCR3LG1Q68D85 454 aa10.63□□□□□ -0.71
HMGCS1-205ENST00000508319 TMEM42Q69YG0 159 aa10.63□□□□□ -0.71
HMGCS1-205ENST00000508319 DHRS7BQ6IAN0 325 aaPredicted RBP10.63□□□□□ -0.71
HMGCS1-205ENST00000508319 HCP5Q6MZN7 132 aa10.63□□□□□ -0.71
HMGCS1-205ENST00000508319 ZNF322Q6U7Q0 402 aaPredicted RBP10.63□□□□□ -0.71
HMGCS1-205ENST00000508319 PLEKHG7Q6ZR37 379 aa10.63□□□□□ -0.71
HMGCS1-205ENST00000508319 MOB3CQ70IA8 216 aa10.63□□□□□ -0.71
HMGCS1-205ENST00000508319 THAP5Q7Z6K1 395 aa10.63□□□□□ -0.71
HMGCS1-205ENST00000508319 TMEM185AQ8NFB2 350 aa10.63□□□□□ -0.71
HMGCS1-205ENST00000508319 OR5A2Q8NGI9 324 aa10.63□□□□□ -0.71
HMGCS1-205ENST00000508319 PPP1R14AQ96A00 147 aa10.63□□□□□ -0.71
HMGCS1-205ENST00000508319 DUS3LQ96G46 650 aaKnown RBP10.63□□□□□ -0.71
HMGCS1-205ENST00000508319 C19orf12Q9NSK7 152 aa10.63□□□□□ -0.71
HMGCS1-205ENST00000508319 ENPP5Q9UJA9 477 aa10.63□□□□□ -0.71
HMGCS1-205ENST00000508319 IKZF2Q9UKS7 526 aa10.63□□□□□ -0.71
HMGCS1-205ENST00000508319 MEIOCA2RUB1 952 aa10.62□□□□□ -0.71
HMGCS1-205ENST00000508319 BTBD17A6NE02 478 aa10.62□□□□□ -0.71
HMGCS1-205ENST00000508319 MAGEB4O15481 346 aaPredicted RBP10.62□□□□□ -0.71
HMGCS1-205ENST00000508319 SYNGR1O43759 233 aa10.62□□□□□ -0.71
HMGCS1-205ENST00000508319 MITFO75030 526 aaPredicted RBP10.62□□□□□ -0.71
HMGCS1-205ENST00000508319 MTRF1O75570 445 aaKnown RBP10.62□□□□□ -0.71
HMGCS1-205ENST00000508319 CXCR4P61073 352 aa10.62□□□□□ -0.71
HMGCS1-205ENST00000508319 ESRRGP62508 458 aa10.62□□□□□ -0.71
HMGCS1-205ENST00000508319 EFNB1P98172 346 aa10.62□□□□□ -0.71
HMGCS1-205ENST00000508319 ACSM1Q08AH1 577 aa10.62□□□□□ -0.71
HMGCS1-205ENST00000508319 SMIM21Q3B7S5 101 aa10.62□□□□□ -0.71
HMGCS1-205ENST00000508319 AADACL4Q5VUY2 407 aa10.62□□□□□ -0.71
HMGCS1-205ENST00000508319 ASPHD2Q6ICH7 369 aa10.62□□□□□ -0.71
HMGCS1-205ENST00000508319 ACP7Q6ZNF0 438 aa10.62□□□□□ -0.71
HMGCS1-205ENST00000508319 MEPCEQ7L2J0 689 aaKnown RBP10.62□□□□□ -0.71
HMGCS1-205ENST00000508319 SLC35F2Q8IXU6 374 aa10.62□□□□□ -0.71
HMGCS1-205ENST00000508319 POC1AQ8NBT0 407 aa10.62□□□□□ -0.71
HMGCS1-205ENST00000508319 OR5R1Q8NH85 324 aa10.62□□□□□ -0.71
HMGCS1-205ENST00000508319 OR5K1Q8NHB7 308 aa10.62□□□□□ -0.71
HMGCS1-205ENST00000508319 ZNF671Q8TAW3 534 aa10.62□□□□□ -0.71
HMGCS1-205ENST00000508319 BCAS4Q8TDM0 211 aa10.62□□□□□ -0.71
HMGCS1-205ENST00000508319 C17orf50Q8WW18 174 aa10.62□□□□□ -0.71
HMGCS1-205ENST00000508319 ZNF488Q96MN9 340 aa10.62□□□□□ -0.71
HMGCS1-205ENST00000508319 PRRG3Q9BZD7 231 aa10.62□□□□□ -0.71
HMGCS1-205ENST00000508319 MMP27Q9H306 513 aa10.62□□□□□ -0.71
HMGCS1-205ENST00000508319 C16orf95Q9H693 158 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms