RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 FAM230AA0A1W2PPH8 454 aa9.56□□□□□ -0.88
PDLIM5-210ENST00000508216 OR6C6A6NF89 314 aa9.56□□□□□ -0.88
PDLIM5-210ENST00000508216 OR4C45A6NMZ5 311 aa9.56□□□□□ -0.88
PDLIM5-210ENST00000508216 SAP30O75446 220 aa9.56□□□□□ -0.88
PDLIM5-210ENST00000508216 CGAP01215 116 aa9.56□□□□□ -0.88
PDLIM5-210ENST00000508216 FUT3P21217 361 aa9.56□□□□□ -0.88
PDLIM5-210ENST00000508216 CFPP27918 469 aa9.56□□□□□ -0.88
PDLIM5-210ENST00000508216 TSPOP30536 169 aa9.56□□□□□ -0.88
PDLIM5-210ENST00000508216 OR1D2P34982 312 aa9.56□□□□□ -0.88
PDLIM5-210ENST00000508216 TIAL1Q01085 375 aaKnown RBP eCLIP9.56□□□□□ -0.884e-8■■■■□ 22.5
PDLIM5-210ENST00000508216 TMEM177Q53S58 311 aa9.56□□□□□ -0.88
PDLIM5-210ENST00000508216 TMEM41BQ5BJD5 291 aa9.56□□□□□ -0.88
PDLIM5-210ENST00000508216 LRRC73Q5JTD7 316 aa9.56□□□□□ -0.88
PDLIM5-210ENST00000508216 C1QL3Q5VWW1 255 aa9.56□□□□□ -0.88
PDLIM5-210ENST00000508216 SP5Q6BEB4 398 aaPredicted RBP9.56□□□□□ -0.88
PDLIM5-210ENST00000508216 DMKNQ6E0U4 476 aaPredicted RBP9.56□□□□□ -0.88
PDLIM5-210ENST00000508216 SLC8B1Q6J4K2 584 aa9.56□□□□□ -0.88
PDLIM5-210ENST00000508216 PWWP2BQ6NUJ5 590 aa9.56□□□□□ -0.88
PDLIM5-210ENST00000508216 UFSP1Q6NVU6 142 aa9.56□□□□□ -0.88
PDLIM5-210ENST00000508216 ZNF429Q86V71 674 aa9.56□□□□□ -0.88
PDLIM5-210ENST00000508216 ZNF280BQ86YH2 543 aa9.56□□□□□ -0.88
PDLIM5-210ENST00000508216 SULF2Q8IWU5 870 aa9.56□□□□□ -0.88
PDLIM5-210ENST00000508216 CISD2Q8N5K1 135 aaKnown RBP9.56□□□□□ -0.88
PDLIM5-210ENST00000508216 CLEC1AQ8NC01 280 aa9.56□□□□□ -0.88
PDLIM5-210ENST00000508216 NECAP1Q8NC96 275 aa9.56□□□□□ -0.88
PDLIM5-210ENST00000508216 OR13C9Q8NGT0 318 aa9.56□□□□□ -0.88
PDLIM5-210ENST00000508216 C1orf216Q8TAB5 229 aa9.56□□□□□ -0.88
PDLIM5-210ENST00000508216 APOBEC4Q8WW27 367 aaKnown RBP9.56□□□□□ -0.88
PDLIM5-210ENST00000508216 ESAMQ96AP7 390 aa9.56□□□□□ -0.88
PDLIM5-210ENST00000508216 LRRC3BQ96PB8 259 aa9.56□□□□□ -0.88
PDLIM5-210ENST00000508216 OR5B12Q96R08 314 aa9.56□□□□□ -0.88
PDLIM5-210ENST00000508216 CABLES2Q9BTV7 478 aa9.56□□□□□ -0.88
PDLIM5-210ENST00000508216 DUSP23Q9BVJ7 150 aa9.56□□□□□ -0.88
PDLIM5-210ENST00000508216 SMG9Q9H0W8 520 aaKnown RBP9.56□□□□□ -0.88
PDLIM5-210ENST00000508216 LRTM1Q9HBL6 345 aa9.56□□□□□ -0.88
PDLIM5-210ENST00000508216 KIAA1456Q9P272 454 aa9.56□□□□□ -0.88
PDLIM5-210ENST00000508216 NINQ8N4C6 2090 aa9.56□□□□□ -0.88
PDLIM5-210ENST00000508216 KIAA1671Q9BY89 1806 aa9.56□□□□□ -0.88
PDLIM5-210ENST00000508216 TMEM189A5PLL7 270 aa9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 MAP1LC3B2A6NCE7 125 aa9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 OR51F1A6NGY5 319 aa9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 SLC17A3O00476 420 aa9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 MPPED1O15442 326 aa9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 TMPRSS11DO60235 418 aa9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 CH25HO95992 272 aa9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 IFNW1P05000 195 aa9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 PFN1P07737 140 aaKnown RBP9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 OMGP23515 440 aa9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 F2RP25116 425 aa9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 SRD5A2P31213 254 aa9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 ADRA1AP35348 466 aa9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 PRLHRP49683 370 aa9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 CNN1P51911 297 aaKnown RBP9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 ZNF92Q03936 586 aa9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 CAPSQ13938 189 aa9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 PDGFRLQ15198 375 aa9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 LRRC37A5PQ49AS3 106 aa9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 RAET1LQ5VY80 246 aa9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 PARS2Q7L3T8 475 aaKnown RBP9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 LRRC70Q7Z2Q7 622 aa9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 BCDIN3DQ7Z5W3 292 aaKnown RBP9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 ATG4DQ86TL0 474 aaPredicted RBP9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 MUC15Q8N387 334 aa9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 DEFB125Q8N687 156 aa9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 KRTCAP2Q8N6L1 136 aa9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 TMEM229BQ8NBD8 167 aa9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 OR10X1Q8NGY0 326 aa9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 NINJ1Q92982 152 aa9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 PGLYRP3Q96LB9 341 aa9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 MAP1LC3BQ9GZQ8 125 aa9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 CHST6Q9GZX3 395 aa9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 NUDT4Q9NZJ9 180 aa9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 FLRT3Q9NZU0 649 aa9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 ZNF391Q9UJN7 358 aa9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 PAM16Q9Y3D7 125 aa9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 HELTA6NFD8 242 aa9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 FBLL1A6NHQ2 334 aaKnown RBP9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 K7EQM0 130 aa9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 TAX1BP3O14907 124 aa9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 TRAF3IP2O43734 574 aaPredicted RBP9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 C1QL1O75973 258 aa9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 ELAVL4P26378 380 aaKnown RBP9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 ZNF506Q5JVG8 444 aa9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 C9orf50Q5SZB4 431 aa9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 C6orf15Q6UXA7 325 aaPredicted RBP9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 ZNF66Q6ZN08 573 aa9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 Q6ZN92 141 aa9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 TMEM217Q8N7C4 229 aa9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 TCTEX1D1Q8N7M0 179 aa9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 TMEM45BQ96B21 275 aa9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 C5orf30Q96GV9 206 aa9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 HPDLQ96IR7 371 aa9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 ABHD6Q9BV23 337 aa9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 CIPCQ9C0C6 399 aa9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 CDT1Q9H211 546 aa9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 ZNF703Q9H7S9 590 aaPredicted RBP9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 NGBQ9NPG2 151 aa9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 GALPQ9UBC7 116 aa9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 FBXW2Q9UKT8 454 aa9.55□□□□□ -0.88
PDLIM5-210ENST00000508216 PSG8Q9UQ74 426 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms